New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3612481 =61 (0.940)4 (0.060) 4/254 NT 6.6% coding (1203/3396 nt) mcoA Mn(II) copper oxidase A
?NC_002947 3612513 = 54 (0.860)coding (1171/3396 nt) mcoA Mn(II) copper oxidase A

CTTTGTAGACGTTCTGCGCCGTGAAATCCATCATGTGGTCGTGGAACCAGTGGGTACTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTGGCAAAGCCGTCGCTTTCGGCCGGGGAGT  >  NC_002947/3612333‑3612629
                                                                                                                                                    |                                                                                                                                                    
cataccatttcgacccacgagcacaacggccactccccggccgaaagcgacggctttgccaacgcgtacttcttccccggccagtactacgactaccgctggccggtgcagctggccggctacgacaccatcaacacccgtgcccagga                                                                                                                                                      <  8:155199‑M1/1‑1 (MQ=255)
cTTTGTAGACGTTCTGCGCCGTGAAATCCATCATGTGGTCGTGGAACCAGTGGGTACTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCa                                                                                                                                                      >  6:359252/1‑149 (MQ=255)
   accatttcgacccacgagcacaacggccactccccggccgaaagcgacggctttgccaacgcgtacttcttccccggccagtactacgactaccgctggccggtgcagctggccggctacgacaccatcaacacccgtgcccaggAccc                                                                                                                                                   <  5:68938‑M1/4‑1 (MQ=255)
    gTAGACGTTCTGCGCCGTGAAATCCATCATGTGGTCGTGGAACCAGTGGGTACTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCg                                                                                                                                                  >  3:121229/1‑149 (MQ=255)
           ttCTGCGCCGTGAAATCCATCATGTGGTCGTGGAACCAGTGGGTACTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCa                                                                                                                                           <  1:128576/149‑1 (MQ=255)
             cTGCGCCGTGAAATCCATCATGTGGTCGTGGAACCAGTGGGTACTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAg                                                                                                                                          <  4:198153/148‑1 (MQ=255)
               gcgcCGTGAAATCCATCATGTGGTCGTGGAACCAGTGGGTACTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCa                                                                                                                                                      <  1:148898/134‑1 (MQ=255)
               gcgcCGTGAAATCCATCATGTGGTCGTGGAACCAGTGGGTACTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCa                                                                                                                                                      >  2:148898/1‑134 (MQ=255)
                cgcCGTGAAATCCATCATGTGGTCGTGGAACCAGTGGGTACTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAggg                                                                                                                                        <  4:313464/147‑1 (MQ=255)
                cgcCGTGAAATCCATCATGTGGTCGTGGAACCAGTGGGTACTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAggg                                                                                                                                        <  2:75924/147‑1 (MQ=255)
                  ccGTGAAATCCATCATGTGGTCGTGGAACCAGTGGGTACTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGa                                                                                                                                      >  4:262112/1‑147 (MQ=255)
                                ctccccggccgaaagcgacggctttgccaacgcgtacttcttccccggccagtactacgactaccgctggccggtgcagctggccggctacgacaccatcaacacccgtgcccaggACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTc                                                                                                                      >  6:355824‑M1/117‑149 (MQ=255)
                                atGTGGTCGTGGAACCAGTGGGTACTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTc                                                                                                                      <  7:14625/149‑1 (MQ=255)
                                   gccggccgaaagcgacggctttgccaacgcgtacttcttccccagccagtacttcgactaccgctggccggtgcagctggccggctacgacaccatcaacacccgtgcccaggACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTg                                                                                                                   >  4:107286‑M1/114‑149 (MQ=255)
                                     gTCGTGGAACCATTGGGTACTCATGGTTTGGCGCCAGTCGGCACGAATCTTGATGCTTCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTgg                                                                                                                  <  6:56791/148‑1 (MQ=255)
                                     gTCGTGGAACCAGTGGGTACTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTggg                                                                                                                 >  7:356326/1‑149 (MQ=255)
                                     gTCGTGGAACCAGTGGGTACTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTgg                                                                                                                  <  3:262112/148‑1 (MQ=255)
                                        gtcgAACCAGTGGGTACTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCa                                                                                                               <  8:356326/145‑1 (MQ=255)
                                        gTGGAACCAGTGGGTACTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCa                                                                                                               <  4:121229/148‑1 (MQ=255)
                                                 gTGGGTACTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACgg                                                                                                            <  1:144824/142‑1 (MQ=255)
                                                 gTGGGTACTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACgg                                                                                                            >  2:144824/1‑142 (MQ=255)
                                                 gTGGGTACTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTg                                                                                                      <  8:15396/148‑1 (MQ=255)
                                                 gTGGGTACTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTg                                                                                                      >  7:15396/1‑148 (MQ=255)
                                                   gggTACTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATg                                                                                                   >  6:45608/1‑149 (MQ=255)
                                                     gTACTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGgt                                                                                                 >  6:281192/1‑149 (MQ=255)
                                                     gTACTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGgt                                                                                                 >  7:215200/1‑149 (MQ=255)
                                                      tACTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGgtg                                                                                                >  6:103710/1‑149 (MQ=255)
                                                        cTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTCGATGGTGTc                                                                                              <  3:254005/149‑1 (MQ=255)
                                                         tCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGaaa                                                                                                                                    <  1:159924/110‑1 (MQ=255)
                                                         tCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGaaa                                                                                                                                    >  2:159924/1‑110 (MQ=255)
                                                         tCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCg                                                                                             >  5:70936/1‑149 (MQ=255)
                                                           aTGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCg                                                                                             >  5:55572/1‑147 (MQ=255)
                                                               tttCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCg                                                                                       <  6:70936/149‑1 (MQ=255)
                                                               tttCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCg                                                                                       <  4:359843/149‑1 (MQ=255)
                                                                     gcCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTCAACCATCGTTGACGAACAAGGTTTCACCCGGCGACCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGCTGTTGATGCTGTCGTAGCCGCCCAGc                                                                                 >  3:183703/1‑149 (MQ=255)
                                                                      ccAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAgta                                                                                >  5:116129/1‑147 (MQ=255)
                                                                            gCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCg                                                                          >  2:357303/1‑149 (MQ=255)
                                                                            gCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCg                                                                          <  5:103710/149‑1 (MQ=255)
                                                                             ccACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCgg                                                                         >  1:8098/1‑149 (MQ=255)
                                                                                 gAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAg                                                                     <  1:357303/149‑1 (MQ=255)
                                                                                 gAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAg                                                                     <  5:45608/149‑1 (MQ=255)
                                                                                   aTCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGGACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCg                                                                   >  1:55427/1‑149 (MQ=255)
                                                                                       tacgactaccgctggccggtgcagctggccggctacgacaccatcaacacccgtgcccaggACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTgg                                                                                                                  <  1:246045‑M1/37‑1 (MQ=255)
                                                                                       tacgactaccgctggccggtgcagctggccggctacgacaccatcaacacccgtgcccaggACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTgg                                                                                                                  >  2:246045‑M1/62‑98 (MQ=255)
                                                                                        gATGCTGCCTTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGt                                                                 <  7:306311/146‑1 (MQ=255)
                                                                                        gATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAg                                                               <  1:251241/148‑1 (MQ=255)
                                                                                          tgctgcCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACACGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCg                                                            >  4:59304/1‑149 (MQ=255)
                                                                                            ctgcCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCg                                                            >  5:32358/1‑147 (MQ=255)
                                                                                              gcCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCgtag                                                         >  3:179360/1‑148 (MQ=255)
                                                                                               ccGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCgtag                                                         <  5:359252/147‑1 (MQ=255)
                                                                                                cGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGTAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTAc                                                      <  7:60726/149‑1 (MQ=255)
                                                                                                     tcGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTgg                                                   >  3:191941/1‑147 (MQ=255)
                                                                                                       gCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGGCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCgg                                               >  5:386421/1‑149 (MQ=255)
                                                                                                       gCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCgg                                               >  4:397284/1‑149 (MQ=255)
                                                                                                       gCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCgg                                               >  6:363907/1‑149 (MQ=255)
                                                                                                            ttttCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGgaag                                          <  6:55572/149‑1 (MQ=255)
                                                                                                              ttCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGGACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGgaaga                                         <  2:55427/148‑1 (MQ=255)
                                                                                                               tCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGgaagaa                                        <  8:215200/148‑1 (MQ=255)
                                                                                                                     ccGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCgggg                                             <  1:327887/137‑1 (MQ=255)
                                                                                                                     ccGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCgggg                                             >  2:327887/1‑137 (MQ=255)
                                                                                                                        gTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTg                              <  8:310876/149‑1 (MQ=255)
                                                                                                                              cATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGgaag                                          >  4:202128/1‑131 (MQ=255)
                                                                                                                              cATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGgaag                                          <  3:202128/131‑1 (MQ=255)
                                                                                                                                   ttGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTGGCAAAGCCGTc                   <  6:32358/149‑1 (MQ=255)
                                                                                                                                    tGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATg                                                                                                   >  8:99950/1‑68 (MQ=255)
                                                                                                                                          aCAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTGGCAAAGCCGTCGCTTTCg            >  1:21581/1‑149 (MQ=255)
                                                                                                                                           cAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTGGCaaa                         <  3:73680/135‑1 (MQ=255)
                                                                                                                                           cAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTGGCaaa                         >  4:73680/1‑135 (MQ=255)
                                                                                                                                            aaGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTg                              >  3:328008/1‑129 (MQ=255)
                                                                                                                                            aaGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTg                              <  4:328008/129‑1 (MQ=255)
                                                                                                                                              ggTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTGGCAAAGCCGTCGCTTTCGGCCg        >  6:34900/1‑149 (MQ=255)
                                                                                                                                                    ACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCAAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTGGCAACGCCGTCGCTTTCGGCCGCGGAGt  <  8:64759‑M1/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
CTTTGTAGACGTTCTGCGCCGTGAAATCCATCATGTGGTCGTGGAACCAGTGGGTACTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCACGCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTGGCAAAGCCGTCGCTTTCGGCCGGGGAGT  >  NC_002947/3612333‑3612629

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.