New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4374410 =	55 (0.850)	5 (0.080)	5/254	NT	8.9%	coding (1424/1971 nt)	PP_3849	hemolysin‑type calcium‑binding protein
	?	NC_002947	4374445 =	49 (0.780)					coding (1459/1971 nt)	PP_3849	hemolysin‑type calcium‑binding protein

AATTTAGCTAACACGCTTACGGGTAACAACGGTGACAATGTGCTGAACGGCGGTGCCGGTGCTGACACGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCTTGATAATACCTTGACCGGCAATGGTGCAGATAACCT  >  NC_002947/4374265‑4374551                                                                                                                                                  |                                                                                                                                              cgcctaccagagtgtcgtttcccgctccaccattgagaaggttatctgcaccattgccggtcaaggtattatcaagactgtttcctgtgccctagttagctttggtgccagttaataccaggttttcttgatggtcacccaaagtGCgg                                                                                                                                            <  5:99105‑M1/4‑1 (MQ=255)    ttAGCTAACACGCTTACGGGTAACAACGGTGACAATGTGCTGAACGGCGGTGCCGGTGCTGACACGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCAt                                                                                                                                         >  5:39498/1‑149 (MQ=255)       gCTAACACGCTTACGGGTAACAACGGTGACAATGTGCTGAACGGCGGTGCCGGTGCTGACACGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGCCCTCAGCGAATGGCGGCATCGa                                                                                                                                      >  1:397222/1‑149 (MQ=255)         tAACACGCTTACGGGTAACAACGGTGACAATGTGTTGAACGGCGGTGCCGGTGCTGACACGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGaca                                                                                                                                    >  4:289081/1‑149 (MQ=255)         tAACACGCTTACGGGTAACAACGGTGACAATGTGCTGAACGGCGGTGCCGGTGCTGACACGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGaca                                                                                                                                    >  7:241293/1‑149 (MQ=255)          aaCACGCTTACGGGTAACAACGGTGACAATGTGCTGAACGGCGGTGCCGGTGCTGACACGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGacac                                                                                                                                   >  6:54971/1‑149 (MQ=255)          aaCACGCTTACGGGTAACAACGGTGACAATGTGCTGAACGGCGGTGCCGGTGCTGACACGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGacac                                                                                                                                   >  6:215897/1‑149 (MQ=255)          aaCACGCTTACGGGTAACAACGGTGACAATGTGCTGAACGGCGGTGCCGGTGCTGACACGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGacac                                                                                                                                   >  4:99174/1‑149 (MQ=255)                    cGGGTAACAACGGTGACAATGTGTTGAACGGCGGTGCCGGTGCTGACACGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTAtctc                                                                                                                          <  3:289081/148‑1 (MQ=255)                    cGGGTAACAACGGTGACAATGTGCTGAACGGCGGTGCCGGTGCTGACACGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTAtctc                                                                                                                          <  4:155512/148‑1 (MQ=255)                     gggTAACAACGGTGACAATGTGCTGAACGGCGGTGCCGGTGCTGACACGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCa                                                                                                                        <  5:404651/149‑1 (MQ=255)                          acaacGGTGACAATGTGCTGAACGGCGGTGCCGGTGCTGACACGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTc                                                                                                                   <  8:263299/149‑1 (MQ=255)                             accattgagaaggttatctgcaccattgccggtcaaggtattatcaagactgtttcctgtgccgtagttagctttggtgccagttaataccaggttttcttgatggtcacccaaagtGCGGC‑T‑GACACCGTTATCTCCAGTGTCAg                                                                                                                 <  3:230187‑M1/29‑1 (MQ=255)                             accattgagaaggttatctgcaccattgccggtcaaggtattatcaagactgtttcctgtgccgtagttagctttggtgccagttaataccaggttttcttgatggtcacccaaagtGCGGC‑T‑GACACCGTTATCTCCAGTGTCAg                                                                                                                 >  4:230187‑M1/118‑146 (MQ=255)                               ggTGACAATGTGCTGAACGGCGGTGCCGGTGCTGACACGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCg                                                                                                              >  8:328376/1‑149 (MQ=255)                                     gaaggttatctgcaccattgccggtcaaggtattatcaagactgtttcctgtgccgtagttagctttggtgccagttaataccaggttttcttgatggtcacccaaagtGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACtt                                                                                                         >  3:66531‑M1/110‑148 (MQ=255)                                           cTGACCGGCGGTGCCGGTGCTGACACGCTGATCGGCGGACTATTAAATGACACCTACTACGTACACTTGCTAAATTAAACAGTCATCTATACCTCAGCTATTCGCTCCTGCGATATCTTTATCTCCAGTGTCAGCCGCACTTTgg                                                                                                      <  6:309428/145‑1 (MQ=255)                                              aaCGGCGGTGCCGGTGCTGACACGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGAcc                                                                                                >  6:270350/1‑148 (MQ=255)                                                 ggcggTGCCGGTGCTGACACGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGAACTTTAGGTGACCATc                                                                                             >  8:177318/1‑148 (MQ=255)                                                  gcggTGCCGGTGCTGACACGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCaa                                                                                           <  5:54971/149‑1 (MQ=255)                                                        ccggtgcTGACACGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGaaaa                                                                                      <  6:278435/148‑1 (MQ=255)                                                        ccggtgcTGACACGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGaaaa                                                                                      <  8:241293/148‑1 (MQ=255)                                                        ccggtgcTGACACGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAAc                                                                                     <  6:39498/149‑1 (MQ=255)                                                         cggtgcTGACACGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAAcc                                                                                    >  2:20679/1‑149 (MQ=255)                                                           gtgcTTACACGAAGAACGGCGGCCTACGAAATGACACCTACTACCTTGACTGGGGTAATGTCAAACTCATCCAGACCTCAGCGAATCGAGGCATCGACACCGTTATCTCCAGTGGCAGCCGCACTTTTGGTGACCATCAAGAAAACCTg                                                                                  <  4:108482/149‑1 (MQ=255)                                                                 acacGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTAtt                                                                             <  5:261527/148‑1 (MQ=255)                                                                 acacGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTAtt                                                                             >  6:408204/1‑148 (MQ=255)                                                                 acacGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGGTATCTCCAGTGTCAGCCGCACTATGGGTGACCATCAAGAAAACCTGGTAtt                                                                             >  5:337179/1‑148 (MQ=255)                                                                  cacGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACAGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTa                                                                            >  6:99105/1‑148 (MQ=255)                                                                     gatgatCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACttt                                                                                                        <  6:40203/117‑1 (MQ=255)                                                                     gatgatCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACttt                                                                                                        >  5:40203/1‑117 (MQ=255)                                                                     gatgatCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTg                                                                        >  7:107876/1‑149 (MQ=255)                                                                      atgatCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTgg                                                                       <  6:61788/149‑1 (MQ=255)                                                                            ggcggcCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCa                                                                  >  7:47952/1‑148 (MQ=255)                                                                             gcggcCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCaaa                                                                <  5:215897/149‑1 (MQ=255)                                                                             gcggcCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCaaa                                                                <  5:137545/149‑1 (MQ=255)                                                                             gcggcCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCaaa                                                                <  1:20679/149‑1 (MQ=255)                                                                              cggcCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAg                                                               <  3:99174/149‑1 (MQ=255)                                                                              cggcCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAg                                                               <  3:258461/149‑1 (MQ=255)                                                                               ggcCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGc                                                              <  5:408204/149‑1 (MQ=255)                                                                                 tttcctgtgccgtagttagctttggtgccagttaataccaggttttcttgatggtcacccaaagtGCGGCATCGACTCCGTTATCTCCAGTGTCAGCCGCACTTTgg                                                                                                      >  2:22124‑M1/66‑107 (MQ=255)                                                                                 tttcctgtgccgtagttagctttggtgccagttaataccaggttttcttgatggtcacccaaagtGCGGCATCGACTCCGTTATCTCCAGTGTCAGCCGCACTTTgg                                                                                                      <  1:22124‑M1/42‑1 (MQ=255)                                                                                                   ctacGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACa                                          <  5:270350/149‑1 (MQ=255)                                                                                                       gTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTg                                                                        >  4:323176/1‑115 (MQ=255)                                                                                                       gTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTg                                                                        <  3:323176/115‑1 (MQ=255)                                                                                                       gTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCt                                      >  4:229997/1‑149 (MQ=255)                                                                                                           aCTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCTTGa                                   <  7:328376/148‑1 (MQ=255)                                                                                                               gggTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTGTTGataa                                <  8:47952/147‑1 (MQ=255)                                                                                                               gggTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCTTGataa                                <  1:168305/147‑1 (MQ=255)                                                                                                                     tGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCTTGATAATACCTTGa                        >  6:118801/1‑149 (MQ=255)                                                                                                                         aaaGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCTTGATAATACCTTGACCgg                    >  5:130522/1‑149 (MQ=255)                                                                                                                                 cGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCTTGATAATACCTTGACCGGCAATGGTg            >  8:32672/1‑149 (MQ=255)                                                                                                                                  gagaCCTCAGCGAATGGAGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCTTGATAATACCTTGACCGGCAATGGTGc           <  7:177318/149‑1 (MQ=255)                                                                                                                                   agaCCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACAGGCACCAAAGCTAACTACGGCCAAGGAAACAGTCTTGATAAAACCTTGACCGGCAATGGTGCa          >  6:18261/1‑149 (MQ=255)                                                                                                                                        tCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTAc                                                       >  6:91782/1‑99 (MQ=255)                                                                                                                                        tCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTAc                                                       <  5:91782/99‑1 (MQ=255)                                                                                                                                          aGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCTTGATAATACCTTGACCGGCAATGGTGCAGATAAcc   >  2:196296/1‑149 (MQ=255)                                                                                                                                          aGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCTTGATAATACCTTGACCGGCAATGGTGCAGATAAcc   >  1:190116/1‑149 (MQ=255)                                                                                                                                           gCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCTTGATAATACCTTGACCGGCAATGGTGCAGATAACCt  <  3:229997/149‑1 (MQ=255)                                                                                                                                            cGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCTTGa                                   <  6:260893/115‑1 (MQ=255)                                                                                                                                            cGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCTTGa                                   >  5:260893/1‑115 (MQ=255)                                                                                                                                                  |                                                                                                                                              AATTTAGCTAACACGCTTACGGGTAACAACGGTGACAATGTGCTGAACGGCGGTGCCGGTGCTGACACGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCTTGATAATACCTTGACCGGCAATGGTGCAGATAACCT  >  NC_002947/4374265‑4374551

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.