New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4374410 =	55 (0.850)	5 (0.080)	5/254	NT	8.9%	coding (1424/1971 nt)	PP_3849	hemolysin‑type calcium‑binding protein
	?	NC_002947	4374445 =	49 (0.780)					coding (1459/1971 nt)	PP_3849	hemolysin‑type calcium‑binding protein

AATGTGCTGAACGGCGGTGCCGGTGCTGACACGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCTTGATAATACCTTGACCGGCAATGGTGCAGATAACCTTCTCAATGGTGGAGCGGGAAACGACACTCTGGTAGGCG  >  NC_002947/4374301‑4374589                                                                                                                                                 |                                                                                                                                                 gaaggttatctgcaccattgccggtcaaggtattatcaagactgtttcctgtgccgtagttagctttggtgccagttaataccaggttttcttgatggtcacccaaagtGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACtt                                                                                                                                               >  3:66531‑M1/110‑148 (MQ=255)       cTGACCGGCGGTGCCGGTGCTGACACGCTGATCGGCGGACTATTAAATGACACCTACTACGTACACTTGCTAAATTAAACAGTCATCTATACCTCAGCTATTCGCTCCTGCGATATCTTTATCTCCAGTGTCAGCCGCACTTTgg                                                                                                                                            <  6:309428/145‑1 (MQ=255)          aaCGGCGGTGCCGGTGCTGACACGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGAcc                                                                                                                                      >  6:270350/1‑148 (MQ=255)             ggcggTGCCGGTGCTGACACGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGAACTTTAGGTGACCATc                                                                                                                                   >  8:177318/1‑148 (MQ=255)              gcggTGCCGGTGCTGACACGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCaa                                                                                                                                 <  5:54971/149‑1 (MQ=255)                    ccggtgcTGACACGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGaaaa                                                                                                                            <  6:278435/148‑1 (MQ=255)                    ccggtgcTGACACGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGaaaa                                                                                                                            <  8:241293/148‑1 (MQ=255)                    ccggtgcTGACACGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAAc                                                                                                                           <  6:39498/149‑1 (MQ=255)                     cggtgcTGACACGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAAcc                                                                                                                          >  2:20679/1‑149 (MQ=255)                       gtgcTTACACGAAGAACGGCGGCCTACGAAATGACACCTACTACCTTGACTGGGGTAATGTCAAACTCATCCAGACCTCAGCGAATCGAGGCATCGACACCGTTATCTCCAGTGGCAGCCGCACTTTTGGTGACCATCAAGAAAACCTg                                                                                                                        <  4:108482/149‑1 (MQ=255)                             acacGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTAtt                                                                                                                   <  5:261527/148‑1 (MQ=255)                             acacGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTAtt                                                                                                                   >  6:408204/1‑148 (MQ=255)                             acacGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGGTATCTCCAGTGTCAGCCGCACTATGGGTGACCATCAAGAAAACCTGGTAtt                                                                                                                   >  5:337179/1‑148 (MQ=255)                              cacGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACAGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTa                                                                                                                  >  6:99105/1‑148 (MQ=255)                                 gatgatCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACttt                                                                                                                                              <  6:40203/117‑1 (MQ=255)                                 gatgatCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACttt                                                                                                                                              >  5:40203/1‑117 (MQ=255)                                 gatgatCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTg                                                                                                              >  7:107876/1‑149 (MQ=255)                                  atgatCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTgg                                                                                                             <  6:61788/149‑1 (MQ=255)                                        ggcggcCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCa                                                                                                        >  7:47952/1‑148 (MQ=255)                                         gcggcCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCaaa                                                                                                      <  1:20679/149‑1 (MQ=255)                                         gcggcCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCaaa                                                                                                      <  5:137545/149‑1 (MQ=255)                                         gcggcCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCaaa                                                                                                      <  5:215897/149‑1 (MQ=255)                                          cggcCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAg                                                                                                     <  3:99174/149‑1 (MQ=255)                                          cggcCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAg                                                                                                     <  3:258461/149‑1 (MQ=255)                                           ggcCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGc                                                                                                    <  5:408204/149‑1 (MQ=255)                                             tttcctgtgccgtagttagctttggtgccagttaataccaggttttcttgatggtcacccaaagtGCGGCATCGACTCCGTTATCTCCAGTGTCAGCCGCACTTTgg                                                                                                                                            <  1:22124‑M1/42‑1 (MQ=255)                                             tttcctgtgccgtagttagctttggtgccagttaataccaggttttcttgatggtcacccaaagtGCGGCATCGACTCCGTTATCTCCAGTGTCAGCCGCACTTTgg                                                                                                                                            >  2:22124‑M1/66‑107 (MQ=255)                                                               ctacGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACa                                                                                <  5:270350/149‑1 (MQ=255)                                                                   gTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTg                                                                                                              >  4:323176/1‑115 (MQ=255)                                                                   gTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTg                                                                                                              <  3:323176/115‑1 (MQ=255)                                                                   gTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCt                                                                            >  4:229997/1‑149 (MQ=255)                                                                       aCTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCTTGa                                                                         <  7:328376/148‑1 (MQ=255)                                                                           gggTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTGTTGataa                                                                      <  8:47952/147‑1 (MQ=255)                                                                           gggTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCTTGataa                                                                      <  1:168305/147‑1 (MQ=255)                                                                                 tGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCTTGATAATACCTTGa                                                              >  6:118801/1‑149 (MQ=255)                                                                                     aaaGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCTTGATAATACCTTGACCgg                                                          >  5:130522/1‑149 (MQ=255)                                                                                             cGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCTTGATAATACCTTGACCGGCAATGGTg                                                  >  8:32672/1‑149 (MQ=255)                                                                                              gagaCCTCAGCGAATGGAGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCTTGATAATACCTTGACCGGCAATGGTGc                                                 <  7:177318/149‑1 (MQ=255)                                                                                               agaCCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACAGGCACCAAAGCTAACTACGGCCAAGGAAACAGTCTTGATAAAACCTTGACCGGCAATGGTGCa                                                >  6:18261/1‑149 (MQ=255)                                                                                                    tCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTAc                                                                                             >  6:91782/1‑99 (MQ=255)                                                                                                    tCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTAc                                                                                             <  5:91782/99‑1 (MQ=255)                                                                                                      aGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCTTGATAATACCTTGACCGGCAATGGTGCAGATAAcc                                         >  1:190116/1‑149 (MQ=255)                                                                                                      aGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCTTGATAATACCTTGACCGGCAATGGTGCAGATAAcc                                         >  2:196296/1‑149 (MQ=255)                                                                                                       gCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCTTGATAATACCTTGACCGGCAATGGTGCAGATAACCt                                        <  3:229997/149‑1 (MQ=255)                                                                                                       ccaaagtgcggctgacactggagataacggagtcgatgccgcACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGaaa                                                                                  <  1:22124‑M2/65‑1 (MQ=255)                                                                                                       ccaaagtgcggctgacactggagataacggagtcgatgccgcACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGaaa                                                                                  >  2:22124‑M2/43‑107 (MQ=255)                                                                                                        cGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCTTGa                                                                         >  5:260893/1‑115 (MQ=255)                                                                                                        cGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCTTGa                                                                         <  6:260893/115‑1 (MQ=255)                                                                                                          aagtgcggctgacactggagataacggtgtcgatgccgcACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCTTGATAATACCTTGACCGGCAATGGTGCAGATAACCTtc                                      >  3:66531‑M2/40‑148 (MQ=255)                                                                                                               CGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCTTGATAATACCTTGACCGGCAATGGTGCGGATAACCTTCTCAAtg                                <  8:69386‑M1/149‑1 (MQ=255)                                                                                                                    ctgacactggagataacggtgtcagccgcACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCTTGATAATACCTTGACCGGCAATGGTGCAGATAACCTTCTCAAtggt                              >  4:230187‑M2/30‑146 (MQ=255)                                                                                                                    ctgacactggagataacggtgtcagccgcACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCTTGATAATACCTTGACCGGCAATGGTGCAGATAACCTTCTCAAtggt                              <  3:230187‑M2/117‑1 (MQ=255)                                                                                                                           cGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCTTGATAATACCTTGACCGGCAATGGTGCAGATAACCTTCTCAATGGTGGAGCGGGa                     >  7:17558/1‑148 (MQ=255)                                                                                                                               aTCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCTTGATAATACCTTGACCGGCAATGGTGCAGATAACCTTCTCAATGGTGGAGCGGGAAACg                 <  5:118801/148‑1 (MQ=255)                                                                                                                                tctcCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCTTGATAATACCTTGACCGGCAATGGTGCAGATAACCTTCTCAATGGTGGAGCGGGAAACGa                <  8:17558/148‑1 (MQ=255)                                                                                                                                tctcCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCTTGATAATACCTTGACCGGCAATGGTGCAGATAACCTTCTCAATGGTGGAGCGGGAAACGa                <  6:130522/148‑1 (MQ=255)                                                                                                                                  tcCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCTTGATAATACCTTGACCGGCAATGGTGCAGATAACCTTCTCAATGGTGGAGCg                        <  3:72598/138‑1 (MQ=255)                                                                                                                                  tcCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCTTGATAATACCTTGACCGGCAATGGTGCAGATAACCTTCTCAATGGTGGAGCg                        >  4:72598/1‑138 (MQ=255)                                                                                                                                  tcCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCTTGATAATACCTTGACCGGCAATGGTGCAGATAACCTTCTCAATGGTGGAGCGGGAAACGacac             >  1:8010/1‑149 (MQ=255)                                                                                                                                     aGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGGCTTGTTAATACCTTGACCGGCAATGGTGCAGATAACCTTCTCAATGGTGGAGCGGGAAACGACActct          <  6:337179/149‑1 (MQ=255)                                                                                                                                             ccgcACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTAGGGCACAGGAAACAGTCTTGATAATACCTTGACCGGCAATGGTGCAGATAACCTTCTCAATGGTGGAGCGGGAAACGACACTCTGGTAGGCg  <  5:99105‑M2/145‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                 AATGTGCTGAACGGCGGTGCCGGTGCTGACACGATGATCGGCGGCCTAGGAAATGACACCTACTACGTTGACTGGGGTAATGACAAAGTCATCGAGACCTCAGCGAATGGCGGCATCGACACCGTTATCTCCAGTGTCAGCCGCACTTTGGGTGACCATCAAGAAAACCTGGTATTAACTGGCACCAAAGCTAACTACGGCACAGGAAACAGTCTTGATAATACCTTGACCGGCAATGGTGCAGATAACCTTCTCAATGGTGGAGCGGGAAACGACACTCTGGTAGGCG  >  NC_002947/4374301‑4374589

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.