New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5167753 =	67 (1.030)	7 (0.110)	7/250	NT	10.3%	coding (127/3906 nt)	hrpA	ATP‑dependent helicase HrpA
	?	NC_002947	5167791 =	58 (0.940)					coding (89/3906 nt)	hrpA	ATP‑dependent helicase HrpA

CGATCACCAATACCTGGTTTTCGGCCAGGGCCTTCTTGATTTCGTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATGGCGTGGTCAGTCATGGGGCTTTTTAGTGATGCAGGT  >  NC_002947/5167606‑5167901                                                                                                                                                    |                                                                                                                                                       cgactttccgaatgccgatcatgaaaaagcaggctcacctgcatcactaaaaagccccatgactgaccacgccatcgacaaactgctgcaaaacctcgaccacgccatgattgccgaccgccattgcctgcgccggcaactgcacgaAc                                                                                                                                                       >  5:88375‑M1/148‑149 (MQ=255)  gactttccgaatgccgatcatgaaaaagcaggctcacctgcatcactaaaaagccccatgactgaccacgccatcgacaaactgctgcaaaacctcgaccacgccatgattgccgaccgccattgcctgcgccggcaactgcacgaACt                                                                                                                                                      >  7:121874‑M1/147‑149 (MQ=255)  gATCACCAATACCTGGTTTTCGGCCAGGGCCTTCTTGATTTCGTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACt                                                                                                                                                      >  3:233790/1‑149 (MQ=255)  gATCACCAATACCTGGTTTTCGGCCAGGGCCTTCTTGATTTCGTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACt                                                                                                                                                      >  2:327017/1‑149 (MQ=255)  gATCACCAATACCTGGTTTTCGGCCAGGGCCTTCTTGATTTCGTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACt                                                                                                                                                      >  2:2329/1‑149 (MQ=255)    ctttccgaatgccgatcatgaaaaagcaggctcacctgcatcactaaaaagccccatgactgaccacgccatcgacaaactgctgcaaaacctcgaccacgccatgattgccgaccgccattgcctgcgccggcaactgcacgaACTgc                                                                                                                                                    >  4:291384‑M1/145‑149 (MQ=255)      ttccgaatgccgatcatgaaaaagcaggctcacctgcatcactaaaaagccccatgactgaccacgccatcgacaaactgctgcaaaacctcgaccacgccatgattgccgaccgccattgcctgcgccggcaactgcacgaACTgcg                                                                                                                                                   <  5:11239‑M1/6‑1 (MQ=255)        cAATACCTGGTTTTCGGCCAGGGCCTTCTTGATTTCGTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTgcgc                                                                                                                                                  >  8:7003/1‑147 (MQ=255)        cAATACCTGGTTTTCGGCCAGGGCCTTCTTGATTTCGTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTgcgc                                                                                                                                                  >  7:108900/1‑147 (MQ=255)        cAATACCTGGTTTTCGGCCAGGGCCTTCTTGATTTCGTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCa                                                                                                                                                <  6:188082/149‑1 (MQ=255)             ccTGGTTTTCGGCCAGGGCCTTCTTGATTTCGTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTc                                                                                                                                           <  7:275124/149‑1 (MQ=255)             ccTGGTTTTCGGCCAGGGCCTTCTTGATTTCGTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTc                                                                                                                                           <  1:30294/149‑1 (MQ=255)             ccTGGTTTTCGGCCAGGGCCTTCTTGATTTCGTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCATACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTc                                                                                                                                           <  4:94956/149‑1 (MQ=255)              cTGGTTTTCGGCCAGGGCCTTCTTGATTTCGTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCg                                                                                                                                          >  6:163463/1‑149 (MQ=255)              cTGGTTTTCGGCCAGGGCCTTCTTGATTTCGTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCg                                                                                                                                          >  6:398861/1‑149 (MQ=255)                 gTTTTCGGCCAGGGCCTTCTTGATTTCGTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGcc                                                                                                                                        <  1:390027/148‑1 (MQ=255)                 gTTTTCGGCCAGGGCCTTCTTGATTTCGTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGc                                                                                                                                         <  7:42263/147‑1 (MQ=255)                       ggCCAGGGCCTTCTTGATTTCGTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCgg                                                                                                                                 >  8:174209/1‑149 (MQ=255)                         ccAGGGCCTTCTTGATTTCGTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCgggg                                                                                                                               >  2:191330/1‑149 (MQ=255)                          cAGGGCCTTCTTGATTTCGTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGgc                                                                                                                              <  4:170104/149‑1 (MQ=255)                                  tcttGATTTCGTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTgcg                                                                                                                       >  7:384695/1‑148 (MQ=255)                                   cttGATTTCGTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTgcg                                                                                                                       <  7:226241/147‑1 (MQ=255)                                     acctgcatcactaaaaagccccatgactgaccacgccatcgacaaactgctgcaaaacctcgaccacgccatgattgccgaccgccattgcctgcgccggcaactgcacgaACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAg                                                                                                                    >  5:239879‑M1/112‑148 (MQ=255)                                     acctgcatcactaaaaagccccatgactgaccacgccatcgacaaactgctgcaaaacctcgaccacgccatgattgccgaccgccattgcctgcgccggcaactgcacgaACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGt                                                                                                                   <  1:27736‑M1/38‑1 (MQ=255)                                      cctgcatcactaaaaagccccatgactgaccacgccatcgacaaactgctgcaaaacctcgaccacgccatgattgccgaccgccattgcctgcgccggcaactgcacgaACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGtt                                                                                                                  >  2:27736‑M1/111‑149 (MQ=255)                                        tttCGTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCg                                                                                                                <  1:403856/149‑1 (MQ=255)                                          tCGTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGt                                                                                                               >  8:213370/1‑148 (MQ=255)                                          tCGTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTg                                                                                                              >  7:196672/1‑149 (MQ=255)                                            gTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTg                                                                                                              >  3:110085/1‑147 (MQ=255)                                            gTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCa                                                                                                            <  5:398861/149‑1 (MQ=255)                                            gTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCa                                                                                                            <  4:72358/149‑1 (MQ=255)                                               aCGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGtt                                                                                                         <  1:191330/149‑1 (MQ=255)                                                     ggcggcGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCg                                                                                                     <  7:174209/147‑1 (MQ=255)                                                        ggcgATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCa                                                                                                <  1:185427/149‑1 (MQ=255)                                                        ggcgATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCa                                                                                                <  8:196672/149‑1 (MQ=255)                                                          cgATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAgg                                                                                              <  8:384695/149‑1 (MQ=255)                                                                gCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATgg                                                                                      <  5:163463/149‑1 (MQ=255)                                                                      tGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGCGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCC‑‑ATGGCGGTCg                                                                                >  6:316291/1‑149 (MQ=255)                                                                      tGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCg                                                                                                                >  4:48927/1‑119 (MQ=255)                                                                      tGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCg                                                                                                                <  3:48927/119‑1 (MQ=255)                                                                       gtcgtcGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCg                                                                                <  4:110085/148‑1 (MQ=255)                                                                        tcgtcgTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCgg                                                                               >  1:102629/1‑148 (MQ=255)                                                                          gtcgtAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCaa                                                                            >  2:317581/1‑149 (MQ=255)                                                                           tcgacaaactgctgcaaaacctcgaccacgccatgattgccgaccgccattgcctgcgccggcaactgcacgaACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGt                                                                                                               >  5:19002‑M1/74‑115 (MQ=255)                                                                           tcgacaaactgctgcaaaacctcgaccacgccatgattgccgaccgccattgcctgcgccggcaactgcacgaACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGt                                                                                                               <  6:19002‑M1/42‑1 (MQ=255)                                                                                 cGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCAATCATTGc                                                                     <  5:331973/149‑1 (MQ=255)                                                                                 cGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCAATCATGGc                                                                     <  8:108900/149‑1 (MQ=255)                                                                                   tACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCAATCATGGCGt                                                                   >  7:122374/1‑149 (MQ=255)                                                                                      ggTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCAATCATGGCGTGGt                                                                <  1:399437/149‑1 (MQ=255)                                                                                       tgcaaaacctcgaccacgccatgattgccgaccgccattgcctgcgccggcaactgcacgaACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTc                                                                                                                 >  5:314915‑M1/62‑101 (MQ=255)                                                                                       tgcaaaacctcgaccacgccatgattgccgaccgccattgcctgcgccggcaactgcacgaACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTc                                                                                                                 <  6:314915‑M1/40‑1 (MQ=255)                                                                                          ggCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCAATCATGGCGTGGTCGAg                                                            <  7:148174/149‑1 (MQ=255)                                                                                          ggCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCAATCATGGCGTGGTCGAg                                                            >  6:7707/1‑149 (MQ=255)                                                                                             aCGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCAATCATGGCGTGGTCGAGGtt                                                         >  6:11239/1‑149 (MQ=255)                                                                                             aCGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCAATCATGGCGTGGTCGAGGtt                                                         >  1:380313/1‑149 (MQ=255)                                                                                                ctctGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTg                                                      <  8:181560/149‑1 (MQ=255)                                                                                                   tgctgACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTgcag                                                   >  2:219516/1‑149 (MQ=255)                                                                                                   tgctgACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTgcag                                                   >  5:100828/1‑149 (MQ=255)                                                                                                   tgctgACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTgc                                                     <  1:317581/147‑1 (MQ=255)                                                                                                   tgctgACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCATCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTgcag                                                   >  7:357160/1‑149 (MQ=255)                                                                                                     ctgACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTgcagca                                                 <  2:102629/149‑1 (MQ=255)                                                                                                     ctgACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTgcagca                                                 <  6:100828/149‑1 (MQ=255)                                                                                                     ctgACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTgcag                                                   >  2:407877/1‑147 (MQ=255)                                                                                                     ctgACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTgcag                                                   >  6:100236/1‑147 (MQ=255)                                                                                                        aCGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGt                                               <  4:238597/148‑1 (MQ=255)                                                                                                                  aCCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATGGc                                    <  7:7003/149‑1 (MQ=255)                                                                                                                    cTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATGGCGt                                  >  5:48354/1‑149 (MQ=255)                                                                                                                      gAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGAAGCAGTTTGTCGATGGCGTgg                                >  6:95899/1‑149 (MQ=255)                                                                                                                         cgcAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATGGCGTGgtca                             <  7:213370/149‑1 (MQ=255)                                                                                                                         cgcAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATGGCGTGgt                               >  4:21830/1‑147 (MQ=255)                                                                                                                              gaggCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATGGCGTGGTCAGTCAt                        <  6:48354/149‑1 (MQ=255)                                                                                                                              gaggCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATGGCGTGGTCAGTCAt                        <  5:100236/149‑1 (MQ=255)                                                                                                                               aggCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATGGCGTGGTCAGTCATg                       <  8:122374/149‑1 (MQ=255)                                                                                                                                 gCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATGGCGTGGTCAGTCATggg                     >  2:310564/1‑149 (MQ=255)                                                                                                                                   cTGGCCCTTCTCCACCCACTGCGCCAGCTTCGACTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATTGCGGTCGTCACTCATGTCGGGGTCGAGGTTGTGGATCAGATTGTCGCTGGCGTGGTCAGTCATGTGGc                   >  4:54747/1‑149 (MQ=255)                                                                                                                                   cTGGACCTTCTCCACCCACTCCGCCAGCTTCGCCTCGTCGCGGCGGTTGCGCAGTTACAGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCAAACATGGCGTCGTCGACGTTTTGCACGAATATGTCGAAGGCGTGGTCAGACAAgggg                    >  4:49458/1‑148 (MQ=255)                                                                                                                                    tGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATGGCGTGGTCAGTCATGGGGCt                  >  5:182503/1‑149 (MQ=255)                                                                                                                                      gACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATGGCGTGGTCAGTCATGGGGCttt                >  1:244868/1‑149 (MQ=255)                                                                                                                                        ccTTCTCCACCCACTGCGCCAGCTTCGCCTCGTAGGGGCGCTTGCGCACTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGCTCGGCAAACATGTCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATCGCGTGGTCAGTCATGGGACattt               >  4:59069/1‑148 (MQ=255)                                                                                                                                          ttCTCCACCCAGTGCGCCAGCTTCGCGTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGGCGGCGCAGGCA‑‑ATGGCGGTCGGCAATCATGGCGTGGTGGAGGTTTTGCAGGAGTTTGTCGATGGCGTGGTCAGTCATGGGGCTTTTTAg            <  8:357160/149‑1 (MQ=255)                                                                                                                                            ctcCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATGGCGTGGTCAGTCATGGGGCTTTTTAGt           <  2:380313/148‑1 (MQ=255)                                                                                                                                               cacccacTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATGGCGTGGTCAGTCATGGGGCTTTTTAGTg          <  5:7707/146‑1 (MQ=255)                                                                                                                                               cacccacTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATGGCGTGGTCAGTCATGGGGCTTTTTAGTGAt        <  1:219516/148‑1 (MQ=255)                                                                                                                                                acccacTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATGGCGTGGTCAGTCATGGGGCTTTTTAGTGATGc      <  4:233790/149‑1 (MQ=255)                                                                                                                                                  ccacTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGGCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATGGCGTGGTCAGTCATGGGGCGTTTTAGTGATGCAg    >  3:23859/1‑149 (MQ=255)                                                                                                                                                    ACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCAGTATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATGGCGTGGTCAGTCATGGGGCTTTTTAGTgatgaag    <  1:320185‑M1/149‑4 (MQ=255)                                                                                                                                                    ACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATGGCGTGGTCAGTCATGGGGCTTTTTAGTGATGCAGGt  <  6:234616‑M1/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                       CGATCACCAATACCTGGTTTTCGGCCAGGGCCTTCTTGATTTCGTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCA‑‑ATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATGGCGTGGTCAGTCATGGGGCTTTTTAGTGATGCAGGT  >  NC_002947/5167606‑5167901

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.