New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5225821	69 (1.060)	4 (0.060)	4/254	NT	6.0%	coding (59/876 nt)	PP_4605	AraC family transcriptional regulator
	?	NC_002947	= 5225852	60 (0.960)					coding (90/876 nt)	PP_4605	AraC family transcriptional regulator

CTTGCACAAACTTGCGCTTTTCTTGCGCCGGTAGCTGTCACTCGATCCAGGGCGCAGTAGGATGGCAGGCAAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGC  >  NC_002947/5225679‑5225960                                                                                                                                               |                                                                                                                                            ctTGCACAAACTTGCGCTTTTCTTGCGCCGGTAGCTGTCACTCGATCCAGGGCGCAGTAGGATGGCAGGCAAGAGGACCCGCCCATGACGCCCATCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTg                                                                                                                                         >  8:383395/1‑147 (MQ=255)    gCACAAACTTGCGCTTTTCTTGCGCCGGTAGCTGTCACTCGATCCAGGGCGCAGTAGGATGGCAGGCAAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGc                                                                                                                                     <  5:164340/148‑1 (MQ=255)    gCACAAACTTGCGCTTTTATTGCGCCGGTAGCTGTCACTCGATCCAGGGCCCAGTAGGATGGCACGCAAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCt                                                                                                                                    >  8:279368/1‑149 (MQ=255)      acaAACTTGCGCTTTTCTTGCGCCGGTAGCTGTCACTCGCTCCAGGGCGCAGTAGGATGGCAGGCAAGAGGACCCGCCCATCACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCt                                                                                                                                    >  7:371134/1‑147 (MQ=255)      acaAACTTGCGCTTTTCTTGCGCCGGTAGCTGTCACTCGATCCAGGGCGCAGTAGGATGGCAGGCAAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCt                                                                                                                                    >  8:121892/1‑147 (MQ=255)               cgcTTTTCTTGCGCCGGTAGCTGTCACTCGATCCAGGGCGCAGTAGGATGGCAGGCAAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCAc                                                                                                                          <  7:292634/148‑1 (MQ=255)                gcTTTTCTTGCGCCGGTAGCTGTCACTCGATCCAGGGCGCAGTAGGATGGCAGGCAAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCt                                                                                                                        >  3:319948/1‑149 (MQ=255)                 cTTTTCTTGCGCCGTTAGCTGTCACTCGATCCAGGGCGCAGTAGGATGGCAGGCAAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTg                                                                                                                       <  7:383466/149‑1 (MQ=255)                    ttCTTGCGCCGGTAGCTGTCACTCGATCCAGGGCGCAGTAGGATGGCAGGCAAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGc                                                                                                                    >  3:98779/1‑149 (MQ=255)                       ttGCGCCGGTAGCTGTCACTCGATCCAGGGCGCAGTAGGATGGCAGGCAAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGAc                                                                                                                 <  4:98779/149‑1 (MQ=255)                          cgcCGGTAGCTGTCACTCGATCCAGGGCGCAGTAGGATGGCAGGCAAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGa                                                                                                              >  2:327471/1‑149 (MQ=255)                                   cTGTCACTCGATCCAGGGCGCAGTAGGATGGCAGGCAAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTggcggcg                                                                                                     <  2:67301/149‑1 (MQ=255)                                    tGTCACTCGATCCAGGGCGCAGTAGGATGGCAGGCAAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTggcggcgg                                                                                                    >  2:19083/1‑149 (MQ=255)                                      tCACTCGATCCAGGGCGCAGTAGGATGGCAGGCAAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCa                                                                                                                           >  2:285682/1‑124 (MQ=255)                                      tCACTCGATCCAGGGCGCAGTAGGATGGCAGGCAAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCa                                                                                                                           <  1:285682/124‑1 (MQ=255)                                        aCTCGATCCAGGGCGCAGTAGGATGGCAGGCAAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGtccgtcgcccaggtgcgcgctcagctccagcctgg                                                                                                          <  7:165623‑M1/139‑36 (MQ=255)                                        aCTCGATCCAGGGCGCAGTAGGATGGCAGGCAAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGtccgtcgcccaggtgcgcgctaagctccagcctgg                                                                                                          >  8:165623‑M1/1‑104 (MQ=255)                                        aCTCGATCCAGGGCGCAGTAGGATGGCAGGCAAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGtt                                                                                                >  8:179499/1‑149 (MQ=255)                                        aCTCGATCCAGGGCGCAGTAGGATGGCAGGCAAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGtt                                                                                                >  4:263558/1‑149 (MQ=255)                                        aCTCGATCCAGGGCGCAGTAGGATGGCAGGCAAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGtt                                                                                                >  6:184721/1‑149 (MQ=255)                                         cTCGATCCAGGGCGCAGTAGGATGGCAGGCAAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTgg                                                                                                                      <  4:37482/126‑1 (MQ=255)                                         cTCGATCCAGGGCGCAGTAGGATGGCAGGCAAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTgg                                                                                                                      >  3:37482/1‑126 (MQ=255)                                           cGATCCAGGGCGCAGTAGGATGGCAGGCAAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGtccgtcgcccaggtgcgcgctcagctccagcctggca                                                                                                        <  3:48246‑M1/138‑38 (MQ=255)                                           cGATCCAGGGCGCAGTAGGATGGCAGGCAAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGtccgtcgcccaggtgcgcgctcagctccagcctggca                                                                                                        >  4:48246‑M1/1‑101 (MQ=255)                                            gATCCAGGGCGCAGTAGGATGGCAGGCAAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTtgt                                                                                              <  1:68927/147‑1 (MQ=255)                                            gATCCAGGGCGCAGTAGGATGGCAGGCAAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTgg                                                                                            <  1:337776/149‑1 (MQ=255)                                             aTCCAGGGCGCAGTAGGATGGCAGGCAAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTTGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGa                                                                                           <  5:337264/149‑1 (MQ=255)                                             aTCCAGGGCGCAGTAGGATGGCAGGCAAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGa                                                                                           <  1:28352/149‑1 (MQ=255)                                                  gggCGCAGTAGGATGGCAGGCAAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAAc                                                                                      <  3:86824/149‑1 (MQ=255)                                                       cAGTAGGATGGCAGGCAAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGa                                                                                 <  3:263558/149‑1 (MQ=255)                                                       cAGTAGGATGGCAGGCAAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGa                                                                                 <  3:69643/149‑1 (MQ=255)                                                          tAGGATGGCAGGCAAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGa                                                                              <  7:121892/149‑1 (MQ=255)                                                            ggATGGCACGCAAGAGGACCCGACCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATg                                                                            <  8:148178/149‑1 (MQ=255)                                                                  caggcaAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATgcgc                                                                         <  7:239021/146‑1 (MQ=255)                                                                  caggcaAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATgcgc                                                                         >  8:239021/1‑146 (MQ=255)                                                                  caggcaAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGcgcgcg                                                                      >  4:120865/1‑149 (MQ=255)                                                                   aggcaAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTgg                                                                                            >  8:367728/1‑126 (MQ=255)                                                                   aggcaAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTgg                                                                                            <  7:367728/126‑1 (MQ=255)                                                                     gcaAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCAc                                                                                                                          <  1:255963/94‑1 (MQ=255)                                                                     gcaAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCAc                                                                                                                          >  2:255963/1‑94 (MQ=255)                                                                           ggACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTgg                                                                                                                      <  8:205896/92‑1 (MQ=255)                                                                           ggACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTgg                                                                                                                      >  7:205896/1‑92 (MQ=255)                                                                            gACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGGCCAATGCCAGGGTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTtgtg                                                                                             <  3:302319/116‑1 (MQ=255)                                                                            gACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGCAGCTGAGCGCGCACCTGCGCGACGCACTGGCGGCGGCGTagtg                                                                                             >  4:302319/1‑116 (MQ=255)                                                                               ccGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGcc                                                         <  3:386451/149‑1 (MQ=255)                                                                               ccGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCATCGCCCAATCCCAGGCAGGAGCTGCGCGCGCCCCTGGGCGACGGACTGGCGCCGGCGTTGTGGAGCACCCGTGACGATGCGCGCGACTACCAgccgcc                                                         >  1:191728/1‑149 (MQ=255)                                                                                cGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCt                                                        <  1:327471/149‑1 (MQ=255)                                                                                 gCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTa                                                       <  7:279368/149‑1 (MQ=255)                                                                                    cATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGcc                                                    <  8:65726/149‑1 (MQ=255)                                                                                    cATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGcc                                                    <  5:6836/149‑1 (MQ=255)                                                                                     aTGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCa                                                   >  4:138832/1‑149 (MQ=255)                                                                                          gCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTCCCAGGCGCCTAGCCATcaca                                              >  3:18047/1‑149 (MQ=255)                                                                                                 aCCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTc                                       >  4:176269/1‑149 (MQ=255)                                                                                                   ccAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGCCTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGt                                     >  8:277095/1‑149 (MQ=255)                                                                                                   ccAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTCCCAGGCGCCTAGCCATCACACCTTGTCGt                                     >  5:289522/1‑149 (MQ=255)                                                                                                   ccAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGt                                     >  8:72533/1‑149 (MQ=255)                                                                                                     aGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCGAGGCTGGAGCTGAGCGCGCACCTGTTCGACGGACTGGCGTGGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGc                                   <  8:371134/149‑1 (MQ=255)                                                                                                         gCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACa                               >  7:268193/1‑149 (MQ=255)                                                                                                           aaGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATc                             >  7:107659/1‑149 (MQ=255)                                                                                                                ttCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGa                        >  6:8358/1‑149 (MQ=255)                                                                                                                  cAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGAcg                      >  6:154223/1‑149 (MQ=255)                                                                                                                   aaCGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGAcgg                     >  2:18085/1‑149 (MQ=255)                                                                                                                   aaCGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGAcgg                     <  3:176269/149‑1 (MQ=255)                                                                                                                       ccATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTAc                                >  3:75133/1‑134 (MQ=255)                                                                                                                       ccATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTAc                                <  4:75133/134‑1 (MQ=255)                                                                                                                          tgcatgcCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGAcggcaccggc              <  3:120865/149‑1 (MQ=255)                                                                                                                             atgcCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACggcaccggcacc           >  8:229319/1‑149 (MQ=255)                                                                                                                             atgcCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACggcaccggcacc           <  5:340628/149‑1 (MQ=255)                                                                                                                             atgcCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACggcaccggcacc           <  7:179499/149‑1 (MQ=255)                                                                                                                              tgcCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCt          <  8:268193/149‑1 (MQ=255)                                                                                                                                ccTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTc        <  3:138832/149‑1 (MQ=255)                                                                                                                                 cTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTcc       >  5:3136/1‑149 (MQ=255)                                                                                                                                      ccAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCcgccgc  <  7:383395/149‑1 (MQ=255)                                                                                                                                       cAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGTGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCcgccgc  >  3:245129/1‑148 (MQ=255)                                                                                                                                          tGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGActggcattgggcgaggcatgcatggcgttgaacacttgcaactgggtgagtggcgtcatgggcgggtcctcttgcctgccatcctactgcgccctggatcg         >  4:48246‑M2/1‑37 (MQ=255)                                                                                                                                          tGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGActggcattgggcgaggcatgcatggcgttgaacacttgcaactgggtgagtggcgtcatgggcgggtcctcttgcctgccatcctactgcgccctggatcg         <  3:48246‑M2/138‑102 (MQ=255)                                                                                                                                            ccAGGCTGGAGCTTAGCGCGCACCTGGGCGACGGActggcattgggcgaggcatgcatggcgttgaacacttgcaactgggtgagtggcgtcatgggcgggtcctcttgcctgccatcctactgcgccctggatcgagt      >  8:165623‑M2/1‑35 (MQ=255)                                                                                                                                            ccAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGActggcattgggcgaggcatgcatggcgttgaacacttgcaactgggtgagtggcgtcatgggcgggtcctcttgcctgccatcctactgcgccctggatcgagt      <  7:165623‑M2/139‑105 (MQ=255)                                                                                                                                               |                                                                                                                                            CTTGCACAAACTTGCGCTTTTCTTGCGCCGGTAGCTGTCACTCGATCCAGGGCGCAGTAGGATGGCAGGCAAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGC  >  NC_002947/5225679‑5225960

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.