New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5366891 =82 (1.260)4 (0.060) 3/250 NT 5.3% coding (486/624 nt) rlmE ribosomal RNA large subunit methyltransferase E
?NC_002947 5366942 = 66 (1.070)coding (435/624 nt) rlmE ribosomal RNA large subunit methyltransferase E

CACCTTTCATTACCCTTTGAAGCCCCTGCCCAACAGGTATTGCTCCCGGGAACGGTCCCGTGACGACGACGGCTTGCGCATTTGCACCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCACCGCGGGCGTACCACTCATATTGGGGGCCATGTCGGAAATCACAAGGTCTACATGCGAA  >  NC_002947/5366744‑5367038
                                                                                                                                                   |                                                                                                                                                   
cacCTTTCATTACCCTTTGAAGCCCCTGCACAACAGGTATTGCTCCCGGGAACGGTCCCGTGACGACGACGGCTTGCGCATTTGCACCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCt                                                                                                                                                    <  7:112769/149‑1 (MQ=255)
 acCTTTCATTACCCTTTGAAGCCCCTGCCCAACAGGTATTGCTCCCGGGAACGGTCCCGTGACGACGACGGCTTGCGCATTTGCACCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCtt                                                                                                                                                   <  1:190609/149‑1 (MQ=255)
 acCTTTCATTACCCTTTGAAGCCCCTGCCCAACAGGTATTGCTCCCGGGAACGGTCCCGTGACGACGACGGCTTGCGCATTTGCACCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCtt                                                                                                                                                   >  6:406174/1‑149 (MQ=255)
  ccTTTCATTTCCCTTTGAAGCCCCTGCCCAACAGGTATTGCTCCCGGGAACGGTCCCGTGACGACGACGGCTTGCGCATTTGCACCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTg                                                                                                                                                  <  7:367620/149‑1 (MQ=255)
    tttCATTACCCTTTGAAGCCCCTGCCCAACAGGTATTGCTCCCGGGAACGGTCCCGTGACGACGACGGCTTGCGCATTTGCACCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGAt                                                                                                                                                >  3:221430/1‑149 (MQ=255)
      tCATTACCCTTTGAAGCCCCTGCCCAACAGGTATTGCTCCCGGGAACGGTCCCGTGACGACGACGGCTTGCGCATTTGCACCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGAt                                                                                                                                                <  6:16345/147‑1 (MQ=255)
            ccatttGAAGCCCCTGCCCAACAGGTATTGCTCCCGGGAACGGTCGCGTGACGAGGACGGGTTGCGCTTTTGCAGCTTGTCGAACTTGCTGCGGACGTCCTTCAGGTACACGTCAAAACCTTCGGCCTGGAAAATCTTGATGAGGAAGt                                                                                                                                        <  2:356272/146‑1 (MQ=255)
             ccTTTGAAGCCCCTGCCCAACAGGTATTGCTCCCGGGAACGGTCCCGTGACGACGACGGCTTGCGCATTTGCACCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTc                                                                                                                                       >  2:314427/1‑149 (MQ=255)
             ccTTTGAAGCCCCTGCCCAACAGGTATTGCTCCCGGGAACGGTCCCGTGACGACGACGGCTTGCGCATTTGCACCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTc                                                                                                                                       <  5:154384/149‑1 (MQ=255)
             cagttGAAGCCCATGCCCAACAGGTATTGCTCACGGTAACGGTCCCGTGACGACGACGGCTTGCGCATTTGCACCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTc                                                                                                                                       <  6:285649/146‑1 (MQ=255)
                   aaGCCCCTGCCCAACAGGTATTGCTCCCGGGAACGGTCCCGTGACGACGACGGCTTGCGCATTTGCACCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGccccc                                                                                                                                 >  2:334150/1‑149 (MQ=255)
                       cccTGCCCAACAGGTATTGCTCCCGGGAACGGTCCCGTGACGACGACGGCTTGCGCATTTGCACCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGc                                                                                                                             >  1:58545/1‑149 (MQ=255)
                       cccTGCCCAACAGGTATTGCTCCCGGGAACGGTCCCGTGACGACGACGGCTTGCGCATTTGCACCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGc                                                                                                                             <  5:406174/149‑1 (MQ=255)
                       cccTGCCCAACAGGTATTGCTCCCGGGAACGGTCCCGTGACGACGACGGCTTGCGCATTTGCACCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGc                                                                                                                             >  1:18710/1‑149 (MQ=255)
                       cccTGCCCAACAGGTATTGCTCCCGGGAACGGTCCCGTGACGACGACGGCTTGCGCATTTGCACCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGGCGCCCCCGGGc                                                                                                                             <  7:11933/149‑1 (MQ=255)
                        ccTGCCCAACAGGTATTGCTCCAGGGAACGGTCCCGTGACGACGACGGCTTGCGCATTTGCACCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCt                                                                                                                            >  2:273856/1‑149 (MQ=255)
                         cTGCCCACCAGGGATTGCTCCCGGGAACGGTCCCGTGACGACGCCGGCTTGCGCACTTGCACCTTGGCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCtt                                                                                                                           <  8:262947/149‑1 (MQ=255)
                           gCCCAACAGGTATTGCTCCCGGGAACGGTCGCGTGACGACGACGGCTTCCGCATTTGCACCTTGTCGAACTTGCTGCGCAAGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCtt                                                                                                                           >  1:32574/1‑147 (MQ=255)
                            cccAACAGGTATTGCTCCCGGGAACGGTCCCGTGACGACGACGGCTTGCGCATTTGCACCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGa                                                                                                                         <  4:221430/148‑1 (MQ=255)
                            cccAACAGGTATTGCTCCCGGGAACGGTCCCGTGACGACGACGGCTTGCGCATTTGCACCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGa                                                                                                                         <  1:16580/148‑1 (MQ=255)
                            cccAACAGGTATTGCTCCCGGGAACGGTCCCGTGACGACGACGGCTTGCGCATTTGCACCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGa                                                                                                                         <  1:314427/148‑1 (MQ=255)
                            cccAACAGGTATTGCTCCCGGGAACGGTCCCGTGACGACGACGGCTTGCGCATTTGCACCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAg                                                                                                                        <  3:393298/149‑1 (MQ=255)
                                aCAGGTATTGCTCCCGGGAACGGTCCCGTGACGACGACGGCTTGCGCATTTGCACCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTAcg                                                                                                                    >  5:168933/1‑149 (MQ=255)
                                 cAGGTATTGCTCCCGGGAACGGTCCCGTGACGACGACGGCTTGCGCATTTGCACCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTAcgc                                                                                                                   <  2:18710/149‑1 (MQ=255)
                                   ggTATTGCTCCCGGGAACGGTCCCGTGACGACGACGGCTTGCGCATTTGCATCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCgg                                                                                                                 <  1:334150/149‑1 (MQ=255)
                                     tATTGCTCCCGGGAACGGTCCCGTGACGACGACGGCTTGCGCATTTGCACCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGt                                                                                                               >  8:343750/1‑149 (MQ=255)
                                              cGGGAACGGTCCCGTGACGACGACGGCTTGCGCATTTGCACCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATc                                                                                                      <  2:89314/149‑1 (MQ=255)
                                               cgattcgcatgtagaccttgtgatttccgacatggcccccaatatgagtggtacgcccgcggtggacattccgcgtgccatgttcctctgcgagctggccCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATc                                                                                                      <  7:179455‑M1/48‑1 (MQ=255)
                                                ggAACGGTCCCGTGACGACGACGGCTTGCGCATTTGCACCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCtt                                                                                                                           <  3:170115/126‑1 (MQ=255)
                                                ggAACGGTCCCGTGACGACGACGGCTTGCGCATTTGCACCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCtt                                                                                                                           >  4:170115/1‑126 (MQ=255)
                                                 gAACGGTCCCGTGACGACGACGGCTTGCGCATTTGCACCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTTATCAGTAAGTCGCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAgg                                                                                                  <  7:57624/149‑1 (MQ=255)
                                                 gAACGGTCCCGTGACGACGACGGCTTGCGCATTTGCACCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAg                                                                                                   >  1:218009/1‑149 (MQ=255)
                                                 attcgcatgtagaccttgtgatttccgacatggcccccaatatgagtggtacgcccgcggtggacattccgcgtgccatgttcctctgcgagctggccCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAg                                                                                                   >  8:374291‑M1/99‑149 (MQ=255)
                                                  aaCGGTCCCGTGACGACGACGGCTTGCGCATTTGCACCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAgg                                                                                                  <  2:58545/149‑1 (MQ=255)
                                                   tcgcatgtagaccttgtgatttccgacatggcccccaatatgagtggtacgcccgcggtggacattccgcgtgccatgttcctctgcgagctgtccCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAgg                                                                                                  >  8:330498‑M1/97‑148 (MQ=255)
                                                   tcgcatgtagaccttgtgatttccgacatggcccccaatatgagtggtacgcccgcggtggacattccgcgtgccatgttcctctgcgagctggccCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAgg                                                                                                  >  8:179455‑M1/97‑148 (MQ=255)
                                                           gTGACGACGACGGCTTGCGCATTTGCACCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCg                                                                                         <  4:41513/149‑1 (MQ=255)
                                                                   gacgGCTTGCGCATTTGCACCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGaa                                                                                 <  7:179296/149‑1 (MQ=255)
                                                                             gcATTTGCACCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTa                                                                                                                      >  3:118050/1‑102 (MQ=255)
                                                                             gcATTTGCACCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTa                                                                                                                      <  4:118050/102‑1 (MQ=255)
                                                                               aTTTGCACCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCACCGGGCTTGAGTACGCGGGTCGCCAGAACAAGGGCCAGCTCGCAGAGGAACATGGAAagcg                                                                      >  8:311165/1‑148 (MQ=255)
                                                                                   gCACCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTAAGCGGGTCTCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAAt                                                                  >  6:98473/1‑148 (MQ=255)
                                                                                    cACCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGt                                                                <  1:273856/149‑1 (MQ=255)
                                                                                       cTTGTCGAACTTGCTGCGCACGTCCTTCAGTTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGTCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCa                                                             <  7:311165/149‑1 (MQ=255)
                                                                                       cTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCACGGGc                                                                                                >  6:224993/1‑114 (MQ=255)
                                                                                       cTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGc                                                                                                <  5:224993/114‑1 (MQ=255)
                                                                                          gTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCAc                                                            <  6:168933/147‑1 (MQ=255)
                                                                                           tCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCACcgc                                                         >  5:274093/1‑149 (MQ=255)
                                                                                            cGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCACcgcg                                                        >  3:392680/1‑149 (MQ=255)
                                                                                              aaCTTGCTGCGCACGTCCTTCAGGTACACGTCAAATCCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCACCGCgg                                                       <  5:286955/148‑1 (MQ=255)
                                                                                              aaCTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCACCGCgg                                                       >  6:286955/1‑148 (MQ=255)
                                                                                                    ctgcGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCACCGCGGGCGTAc                                                 <  2:218009/148‑1 (MQ=255)
                                                                                                     tgcGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCACCGCGGGCGTACCa                                               >  3:263971/1‑149 (MQ=255)
                                                                                                     tgcGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCACCGCGGGCGTACCa                                               >  6:300044/1‑149 (MQ=255)
                                                                                                     tgcGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAACTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATCTCCACCGCGGGCGTAcc                                                >  2:190687/1‑148 (MQ=255)
                                                                                                      gcgcACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCg                                                                                         >  2:258146/1‑106 (MQ=255)
                                                                                                      gcgcACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCg                                                                                         <  1:258146/106‑1 (MQ=255)
                                                                                                        gcACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCACCGCGGGCGTACCACt                                             >  2:106994/1‑148 (MQ=255)
                                                                                                        gcACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCACCGCGGGCGTACCACt                                             >  2:99181/1‑148 (MQ=255)
                                                                                                         cACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCACCGCGGGCGTACCACTCa                                           <  5:384855/149‑1 (MQ=255)
                                                                                                          aCGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCACCGCGGGCGTACCACTCat                                          <  7:343750/149‑1 (MQ=255)
                                                                                                              ccTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCACCGCGGGCGTACCACTCATATTg                                      >  3:374703/1‑149 (MQ=255)
                                                                                                              ccTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCACCGCGGGCGTACCACTCATATTg                                      >  3:368621/1‑149 (MQ=255)
                                                                                                              ccTCCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCACCGCGGGCGTACCACTCATATTg                                      >  2:296339/1‑149 (MQ=255)
                                                                                                                ttCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCACCGCGGGCGTACCACTCATATTggg                                    >  6:342995/1‑149 (MQ=255)
                                                                                                                 tCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCCCAGAGGAACATGGCACGCGGAATGTCCACCGCGGGCGTACCACTCATATTgggg                                   >  6:401492/1‑149 (MQ=255)
                                                                                                                    ggaacacCTCAAAACCATCGCCCTGGAAAATCTTGATCAGGAACTCGCCCCCCGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCACCGCGGGCGTACCACTCATATTGGGGGcc                                <  6:411292/146‑1 (MQ=255)
                                                                                                                    ggTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCtt                                                                                                                           <  8:156527/58‑1 (MQ=255)
                                                                                                                    ggTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCtt                                                                                                                           >  7:156527/1‑58 (MQ=255)
                                                                                                                     gTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCACCGCGGGCGTACCACTCATATTGGGGGCCa                               >  5:393312/1‑149 (MQ=255)
                                                                                                                        cacGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCACCGCGGGCGTACCACTCATATTGGGGGCCATGt                            >  6:305244/1‑149 (MQ=255)
                                                                                                                         acGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCACCGCGGGCGTACCACTCATATTGGGGGCCATGTc                           >  2:202292/1‑149 (MQ=255)
                                                                                                                            tCAAAAGCTTCGCCCTGGATAATCTTGATCATGAAGTCGGCCCCGGGCGTGAGTACGCGGGTCGCCATATCAAGGGCCTGGTCGAAGAGGAAGATGGCACGCGGAATGTCGACCGCGGGCGTTGCACTCATATTGGGGGCCATGTCGGa                        <  5:98473/149‑1 (MQ=255)
                                                                                                                            acAAACCCTACCCCCCGTAAAATCTTCACCCGCCAGCCCCCCCCGGGCTTGCGCCCGCGGGCCCCCACATCACGGGCCAGCCCGCACAGCAACATGCCACGCGGAAGCCCCACCGCGGGCGAACCACTCATATTGGGGGCCATGCCgca                        <  6:274093/148‑3 (MQ=255)
                                                                                                                              aaaaCCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCACCGCGGGCGTACCACTCATATTGGGGGCCATGTCGGaa                       <  6:393312/148‑1 (MQ=255)
                                                                                                                               aaaCCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCACCGCGGGCGTACCACTCATATTGGGGGCCATGTCGGAAAt                     >  6:406061/1‑149 (MQ=255)
                                                                                                                                aaCCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCACCGCGGGCGTACCACTCATATTGGGGGCCATGTCGGAAATc                    <  5:342995/149‑1 (MQ=255)
                                                                                                                                 aCCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCACCGCGGGCGTACCACTCATATTGGGGGCCATGTCGGAAATca                   >  6:152852/1‑149 (MQ=255)
                                                                                                                                   cTTCGCCCTGGAAAATCTTGATCAGGCAGTCGCCCCCGGGCGTGAGTACGCGGGTCGCAAGATCACGGGCCAGCGCGCAGAGGAACATGCCACGCGGCAAGGGCAGCGGGGGCGGAGCACACAGCGTGGGGGACCGGTCGGagggcact                 >  4:299636/1‑142 (MQ=255)
                                                                                                                                   cTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCACCGCGGGCGTACCACTCATATTGGGGGCCATGTCGGAAATcac                  >  7:11804/1‑148 (MQ=255)
                                                                                                                                    ttCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCACCGCGGGCGTACCACTCATATTGGGGGCCATGTCGGAAATcac                  >  4:376221/1‑147 (MQ=255)
                                                                                                                                      cGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAACCGCCAGCTCGCAGAGGAACATGGGACGCGGAATGTCCACCGCGGGCGCACCACTCATAATGGCCGCCATGTCGGAAATCACaa                <  2:32574/147‑1 (MQ=255)
                                                                                                                                       gCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCACCGCGGGCGTACCACTCATATTGGGGGCCATGTCGGAAATCACAAGGt             <  1:106994/149‑1 (MQ=255)
                                                                                                                                        cccTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCACCGCGGGCGTACCACTCATATTGGGGGCCATGTCGGAAATCACAAGGTc            >  5:59439/1‑149 (MQ=255)
                                                                                                                                         ccTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCACCGCGGGCGTACCACTCATATTGGGGGCCATGTCGGAAATCACAAGGTc            >  7:248380/1‑148 (MQ=255)
                                                                                                                                         ccTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCACCGCGGGCGTACCACTCATATTGGGGGCCATGTCGGAAATCACAAGGTCt           <  4:374703/149‑1 (MQ=255)
                                                                                                                                         ccTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCACCGCGGGCGTACCACTCATATTGGGGGCCATGTCGGAAATCACAAGGTCt           <  4:368621/149‑1 (MQ=255)
                                                                                                                                          cTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCACCGCGGGCGTACCACTCATATTGGGGGCCATGTCGGAAATCACAAGGTCTa          >  1:211487/1‑149 (MQ=255)
                                                                                                                                           tGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCACCGCGGGCGTACCACTCATATTGGGGGCCATGTCGGAAATCACAAGGTCTa          >  3:42094/1‑148 (MQ=255)
                                                                                                                                             gAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCACCGCGGGCGTACCACTCATATTGGGGGCCATGTCGGAAATCACAAGGTCTACa        <  5:401492/148‑1 (MQ=255)
                                                                                                                                                  tCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCACCGCGGGCGTACCACTCATATTGGGGGCCATGTCGGAAATCACAAGGTCTACATGCGaa  >  3:368100/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
CACCTTTCATTACCCTTTGAAGCCCCTGCCCAACAGGTATTGCTCCCGGGAACGGTCCCGTGACGACGACGGCTTGCGCATTTGCACCTTGTCGAACTTGCTGCGCACGTCCTTCAGGTACACGTCAAAACCTTCGCCCTGGAAAATCTTGATCAGGAAGTCGCCCCCGGGCTTGAGTACGCGGGTCGCCAGATCAAGGGCCAGCTCGCAGAGGAACATGGCACGCGGAATGTCCACCGCGGGCGTACCACTCATATTGGGGGCCATGTCGGAAATCACAAGGTCTACATGCGAA  >  NC_002947/5366744‑5367038

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.