New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 540434460 (0.920)5 (0.090) 5/232 NT 7.5% intergenic (‑642/+75) PP_4746/PP_4748 transposase/amino acid ABC transporter substrate‑binding protein
?NC_002947 = 5404374 71 (1.240)intergenic (‑672/+45) PP_4746/PP_4748 transposase/amino acid ABC transporter substrate‑binding protein

GCAGAGCTGGCGCGCGAAGGTGGTGGCATCGGCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTCGCGGTCCAGGCCAAACGAGGCGAGGATTTCTGCGA  >  NC_002947/5404198‑5404492
                                                                                                                                                   |                                                                                                                                                      
gCAGAGCTGGCGCGCGAAGGTGGTGGCATCGGCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGAt                                                                                                                                                      <  3:16879/149‑1 (MQ=255)
    agCTGGCGCGCGAAGGTGGTGGCATCGGCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGAACCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAAc                                                                                                                                                   >  1:116368/1‑149 (MQ=255)
     gCTGGCGCGCGAAGGTGGTGGCATCGGCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGTATGAACGATAACGc                                                                                                                                                 <  7:156126/149‑1 (MQ=255)
       tGGCGCGCGAAGGTGGTGGCATCGGCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGAtgttcggc                                                                                                                                               >  7:302103/1‑142 (MQ=255)
          cgcgcgTAGGTGTTGGCATGGTCCAGCGACAGGGGCTTTTCGTGTTTGTCGTCGTCGATTGTGTCTTCGGTGCTCTCGGGTTGAAGTTGTGCCGCAGCCAGCGTACCTGCAAGGTAGGCGGTAGCCGCGAATTAACGATAACGCCTCa                                                                                                                                             <  1:84291/148‑1 (MQ=255)
             gcgAAGGTGGTGGCATCGGCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTcc                                                                                                                                         >  7:290054/1‑149 (MQ=255)
               gatggtggtGGCATCGGCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCt                                                                                                                                        >  6:354858/4‑148 (MQ=255)
                aaGGTGGTGGCATCGGCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGa                                                                                                                                      <  3:106674/149‑1 (MQ=255)
                  ggtggtGGCATCGGCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGaaa                                                                                                                                    <  7:82540/149‑1 (MQ=255)
                      gtggCATCGGCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTc                                                                                                                                >  4:120993/1‑149 (MQ=255)
                         gCATCGGCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGcgcgcg                                                                                                                             >  4:304853/1‑149 (MQ=255)
                           aTCGGCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGcaccgcgagctttcaggaatgaggcgtta                                                                                                                           >  5:182529‑M1/1‑120 (MQ=255)
                           aTCGGCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGcaccgcgagctttcaggaatgaggcgtta                                                                                                                           <  1:220208‑M1/149‑30 (MQ=255)
                              ggCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAATCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGcg                                                                                                                        >  1:372767‑M2/1‑147 (MQ=255)
                              ggCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGc                                                                                                                         >  1:244192‑M2/1‑147 (MQ=255)
                              ggCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCGTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGc                                                                                                                         >  4:167445‑M2/1‑147 (MQ=255)
                                   gCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGcgttcat                                                                                                                   <  3:12833‑M2/149‑8 (MQ=255)
                                     gACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGcaccgcgagctttcaggaatgaggcgttatcgttcattc                                                                                                                 <  6:182529‑M1/149‑40 (MQ=255)
                                       cAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGcgttcattcgc                                                                                                               >  6:256376‑M2/1‑138 (MQ=255)
                                          gcgcTTTTCGGGTGTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGACGGTGTGCCGCCGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGcgttcattcgcggc                                                                                                            >  4:206018‑M2/1‑135 (MQ=255)
                                            gcTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGcgttcattcgcggct                                                                                                           <  4:221744‑M2/148‑16 (MQ=255)
                                                 tCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGc                                                                                                     <  6:186353/148‑1 (MQ=255)
                                                    ggTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGcaccgcgagctttcaggaatgaggcgttatcgttcattcg                                                                                                                >  2:79520‑M1/1‑95 (MQ=255)
                                                    ggTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGcaccgcgagctttcaggaatgaggcgttatcgttcattcg                                                                                                                <  1:79520‑M1/135‑41 (MQ=255)
                                                            gtcgtcCATGGGGGCGTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACgg                                                                                         <  2:139336/148‑1 (MQ=255)
                                                               gtcCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGAtt                                                                                     <  5:354858/149‑1 (MQ=255)
                                                               gtcCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGAtt                                                                                     <  2:30991/149‑1 (MQ=255)
                                                                 tcCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGAttt                                                                                    <  3:221744/149‑1 (MQ=255)
                                                                   cATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTg                                                                                   <  2:116368/148‑1 (MQ=255)
                                                                   cATGGGGGCTTCGGTGCTCTCGAGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGa                                                                                  >  7:59402/1‑149 (MQ=255)
                                                                     tGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAATGCCGCGCCTACGGGATTTGAtt                                                                                <  7:257322/149‑1 (MQ=255)
                                                                     tGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGAtt                                                                                <  2:172009/149‑1 (MQ=255)
                                                                     tGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGAtt                                                                                <  1:196936/149‑1 (MQ=255)
                                                                     tGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGAtt                                                                                <  2:289175/149‑1 (MQ=255)
                                                                              cGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTa                                                                         <  3:120993/147‑1 (MQ=255)
                                                                               ggTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACt                                                                       >  2:318354/1‑148 (MQ=255)
                                                                               ggTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACt                                                                       >  3:74605/1‑148 (MQ=255)
                                                                                         ggTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAatc                                                                  >  4:217285/1‑143 (MQ=255)
                                                                                         ggTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAatc                                                                  <  3:217285/143‑1 (MQ=255)
                                                                                          gTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCg                                                           >  8:1814/1‑149 (MQ=255)
                                                                                           ttGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCgg                                                          >  7:329177/1‑149 (MQ=255)
                                                                                            tGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCtt                                                                           <  3:270576/131‑1 (MQ=255)
                                                                                            tGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCtt                                                                           >  4:270576/1‑131 (MQ=255)
                                                                                             gAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCt                                                        >  7:160465/1‑149 (MQ=255)
                                                                                               aGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTcc                                                      >  4:6683/1‑149 (MQ=255)
                                                                                               aGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTcc                                                      >  5:108519/1‑149 (MQ=255)
                                                                                                ggTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGa                                                                                  <  5:64488/120‑1 (MQ=255)
                                                                                                ggTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGa                                                                                  >  6:64488/1‑120 (MQ=255)
                                                                                                ggTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTccc                                                     <  3:304853/149‑1 (MQ=255)
                                                                                                 gtgtGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTcccc                                                    >  5:12217/1‑149 (MQ=255)
                                                                                                  tgtgCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGcgttcattcgcggc                                                                                                            >  2:176391‑M2/1‑80 (MQ=255)
                                                                                                  tgtgCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGcgttcattcgcggc                                                                                                            <  1:176391‑M2/94‑15 (MQ=255)
                                                                                                  tgtgCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTccccc                                                   <  6:12217/149‑1 (MQ=255)
                                                                                                      ccGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCt                                                                                              <  2:49654/103‑1 (MQ=255)
                                                                                                      ccGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCt                                                                                              >  1:49654/1‑103 (MQ=255)
                                                                                                       cGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTc                                                                             >  4:17395/1‑118 (MQ=255)
                                                                                                       cGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTc                                                                             <  3:17395/118‑1 (MQ=255)
                                                                                                        gCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACtttt                                             <  8:329177/149‑1 (MQ=255)
                                                                                                          agccagcGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTg                                            >  7:259063/1‑148 (MQ=255)
                                                                                                          agccagcGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGc                                           <  8:116633/149‑1 (MQ=255)
                                                                                                            ccagcGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAg                                         <  4:12833/149‑1 (MQ=255)
                                                                                                                cGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTc                                     <  2:353296/149‑1 (MQ=255)
                                                                                                                 gAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACtttt                                             >  4:298379/1‑140 (MQ=255)
                                                                                                                 gAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACtttt                                             <  3:298379/140‑1 (MQ=255)
                                                                                                                 gAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTcg                                    >  2:167350/1‑149 (MQ=255)
                                                                                                                   aCCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTcgcg                                  <  3:171357/149‑1 (MQ=255)
                                                                                                                    ccTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTCGCgg                                 <  3:6683/149‑1 (MQ=255)
                                                                                                                      tGCAAGGTATGCTGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACCGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACtttt                                             <  1:293783/136‑1 (MQ=255)
                                                                                                                      tGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGCCTAAAGCCGCGACTACGGGATTTGATTCTCTTTACTCAATCATCCTCGGCTCCCCCACtttt                                             >  2:293783/1‑135 (MQ=255)
                                                                                                                          aGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTCGCGGTCCAgg                           <  6:108519/149‑1 (MQ=255)
                                                                                                                             gAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTCGCGGTCCAGGcc                         >  4:145933/1‑148 (MQ=255)
                                                                                                                              aGGCGGTAGCCGCGAATGAACGATAACGCCTCAGTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGAGCCTACGGGATTTGATTGTCTTTACGGAATCATCCTCGGCGCCCCCACTTTTGCAGCCTCGCGGTCCAGGcaa                        >  8:200009/1‑146 (MQ=255)
                                                                                                                                     aGCCGCGAATGAACGcaccgcgagctttcaggaatgaggcgttatcgttcattcgcggctaccgcctcccttgcaggttcgctggctgcggcacaccttcaacccgagagcaccgaagcccccatggacgacgacaaacccgaaaagc                   <  4:221744‑M1/148‑134 (MQ=255)
                                                                                                                                      gCCGCGAATGAACGcaccgcgagctttcaggaatgaggcgttatcgttcattcgcggctaccgcctcccttgcaggttcgctggctgcggcaca                                                                        <  1:176391‑M1/94‑81 (MQ=255)
                                                                                                                                      gCCGCGAATGAACGcaccgcgagctttcaggaatgaggcgttatcgttcattcgcggctaccgcctcccttgcaggttcgctggctgcggcaca                                                                        >  2:176391‑M1/1‑14 (MQ=255)
                                                                                                                                      gCCGCGAATGAACGcaccgcgagctttcaggaatgaggcgttatcgttcattcgcggctaccgcctcccttgcaggttcgctggcggcggcacaccgtcaacccgagagcaccgaagcccccatggacgacgacacacccgaaaagcgc                 >  4:206018‑M1/1‑14 (MQ=255)
                                                                                                                                      gCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTCGCGGTCCAGGCCAAAcgaggc                <  1:318354/148‑1 (MQ=255)
                                                                                                                                       ccGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTCGCGGTCCAGGCCAAAcgaggcga              <  8:259063/149‑1 (MQ=255)
                                                                                                                                         gcgAATGAACGcaccgcgagctttcaggaatgaggcgttatcgttcattcgcggctaccgcctcccttgcaggttcgctggctgcggcacaccttcaacccgagagcaccgaagcccccatggacgacgacaaacccgaaaagcgcctg              >  6:256376‑M1/1‑11 (MQ=255)
                                                                                                                                          cgAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGcgttcattcgcggctaccgcctcccttgcaggttcgctggctgcggcacaccttcaacccgagagcaccgaagcccccatggacgacgacaaacc                           <  1:79520‑M2/135‑96 (MQ=255)
                                                                                                                                          cgAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGcgttcattcgcggctaccgcctcccttgcaggttcgctggctgcggcacaccttcaacccgagagcaccgaagcccccatggacgacgacaaacc                           >  2:79520‑M2/1‑40 (MQ=255)
                                                                                                                                           gAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGcgttcattcgcggctaccgcctcccttgcaggttcgctggctgcggcacaccttcaacccgagagcaccgaagcccccatggacgacgacaaacccgaaaagcgcctgtc            <  6:182529‑M2/149‑111 (MQ=255)
                                                                                                                                             aTGAACGcaccgcgagctttcaggaatgaggcgttatcgttcattcgcggctaccgcctcccttgcaggttcgctggctgcggcacaccttcaacccgagagcaccgaagcccccatggacgacgacaaacccgaaaagcgcctgtcgc          <  3:12833‑M1/149‑143 (MQ=255)
                                                                                                                                              tGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCa                                          >  5:305938/1‑114 (MQ=255)
                                                                                                                                              tGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCa                                          <  6:305938/114‑1 (MQ=255)
                                                                                                                                              tGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTCGCGGTCCAGGCCAAACGAGGCGAGGATTTc       >  5:110995/1‑149 (MQ=255)
                                                                                                                                               gAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCATCGGCTCCCCCACTTTTGCAGCATCGCGGTCCAGGCCAAACGAGGCGAGGAtttg       >  1:310004/1‑148 (MQ=255)
                                                                                                                                                aaCGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTCGCGGTCCAGGCCAAACGAGGCGAGGATTTCt      <  8:160465/148‑1 (MQ=255)
                                                                                                                                                aaCGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTCGCGGTCCAGGCCAAACGAGGCGAGGATTTCTg     >  8:180762/1‑149 (MQ=255)
                                                                                                                                                 aCGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTCGCGGTCCAGGCCAAACGAGGCGAGGATTTCTGc    >  8:114674/1‑149 (MQ=255)
                                                                                                                                                 aCGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTCGCGGTCCAGGCCAAACGAGGCGAGGATTTCTGc    <  6:110995/149‑1 (MQ=255)
                                                                                                                                                 aCGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTCGCGGTCCAGGCCAAACGAGGCGAGGATTTCTGc    >  1:231815/1‑149 (MQ=255)
                                                                                                                                                  cGcaccgcgagctttcaggaatgaggcgttatcgttcattcgcggctaccgcctcccttgcagattcgctggctgcggcacaccttcaacccgagagcaccgaagcccccatggacgacgacaaacccgaaaagcgcctgtcgctggcc     >  1:372767‑M1/1‑2 (MQ=255)
                                                                                                                                                   gcaccgcgagctttcaggaatgaggcgttatcgttcattcgcggctaccgcctcccttgcaggttcgctggctgcggcacaccttcaacccgagagcaccgacgcccccatggacgacgacaaacccgaaaagcgcctgtcgctggcc     >  4:167445‑M1/1‑1 (MQ=255)
                                                                                                                                                   gcaccgcgagctttcaggaatgaggcgttatcgttcattcgcggctaccgcctcccttgcaggttcgctggctgcggcacaccttcaacccgagagcaccgaagcccccatggacgacgacaaacccgaaaagcgcctgtcgctggcc     >  1:244192‑M1/1‑1 (MQ=255)
                                                                                                                                                   gATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTCGCGGTCCAGGCCAAACGAGGCGAGGATTTCTGCGa  <  8:290054/149‑1 (MQ=255)
                                                                                                                                                   gATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTCGCGGTCCAGGCCAAACGAGGAGAGGATTTCTGCGa  >  5:297277/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                      
GCAGAGCTGGCGCGCGAAGGTGGTGGCATCGGCCAGCGACAGGCGCTTTTCGGGTTTGTCGTCGTCCATGGGGGCTTCGGTGCTCTCGGGTTGAAGGTGTGCCGCAGCCAGCGAACCTGCAAGGGAGGCGGTAGCCGCGAATGAACGATAACGCCTCATTCCTGAAAGCTCGCGGTGCGTTCATTCGCGGCTAAAGCCGCGCCTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTCGCGGTCCAGGCCAAACGAGGCGAGGATTTCTGCGA  >  NC_002947/5404198‑5404492

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.