| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5537031 = | 23 (0.350) | 3 (0.060) | 4/210 | NT | 18.0% | intergenic (+8/+95) | nadE/PP_4870 | NH(3)‑dependent NAD(+) synthetase/azurin |
| ? | NC_002947 | 5537107 = | 9 (0.170) | intergenic (+84/+19) | nadE/PP_4870 | NH(3)‑dependent NAD(+) synthetase/azurin | |||||
ACGAGGCGTCACATGGCGTGACCTACGCGCAGATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCT‑GCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGT > NC_002947/5536884‑5537163 | aCGAGGCGTCACATGGCGTGACCTACGCGCAGATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGcc < 5:138868/149‑1 (MQ=255) gAGGCGTCACATGGCGTGACCTACGCGCAGATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCT‑g < 8:247754/149‑1 (MQ=255) cgcctgagaaagaaaccgaagtgaagttcgacacttccaagctggaagccggtggtgactacagcttcttgtgcaccttcccgggccacatctcgatgatgaaaggcaaggtcatcgtcaagtaatcaaaggctgacggcgaacCCT‑Gc > 6:34010‑M1/145‑149 (MQ=255) cgcctgagaaagaaaccgaagtgaagttcgacacttccaagctggaagccggtggtgactacagcttcttctgcaccttcccgggccacatctcgatgatgaaaggcaaggtcatcgtcaagtaatcaaaggctgacggcgaacCCT‑Gc > 8:356735‑M1/145‑149 (MQ=255) ggCGTCACATGGCGTGACCTACGCGCAGATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCT‑GCa < 5:289394/149‑1 (MQ=255) gagaaagaaaccgaagtgaagttcgacacttccaagctggaagccggtggtgactacagcttcttctgcaccttcccgggccacatctcgatgatgaaaggcaaggtcatcgtcaagtaatcaaaggctgacggcgaacCCT‑GCAGGAg < 1:121873‑M1/10‑1 (MQ=255) gagaaagaaaccgaagtgaagttcgacacttccaagctggaagccggtggtgactacagcttcttctgcaccttcccgggccacatctcgatgatgaaaggcaaggtcatcgtcaagtaatcaaaggctgacggcgaacCCT‑GCAGGAg < 1:64813‑M1/10‑1 (MQ=255) agaaagaaaccgaagtgaagttcgacacttccaagctggaagccggtggtgactacagcttcttctgcaccttcccgggccacatctcgatgatgaaaggcaaggtcatcgtcaagtaatcaaaggctgacggcgaacCCT‑GCAGGAg > 3:186873‑M1/139‑148 (MQ=255) agaaagaaaccgaagtgaagttcgacacttccaagctggaagccggtggtgactacagcttcttctgcaccttcccgggccacatctcgatgatgaaaggcaaggtcatcgtcaagtaatcaaaggctgacggcgaacCCT‑GCAGGAGc > 6:141132‑M1/139‑149 (MQ=255) gaaagaaaccgaagtgaagttcgacacttccaagctggaagccggtggtgactacagcttcttctgcaccttcccgggccacatctcgatgatgaaaggcaaggtcatcgtcaagtaatcaaaggctgacggcgaacCCT‑GCAGGAGCg < 6:401399‑M1/12‑1 (MQ=255) aaagaaaccgaagtgaagttcgacacttccaagctggaagccggtggtgactacagcttcttctgcaccttcccgggccacatctcgatgatgaaaggcaaggtcatcgtcaagtaatcaaaggctgacggcgaacCCT‑GCAGGAGCgg < 2:169647‑M1/13‑1 (MQ=255) aaagaaaccgaagtgaagttcgacacttccaagctggaagccggtggtgactacagcttcttctgcaccttcccgggccacatctcgatgatgaaaggcaaggtcatcgtcaagtaatcaaaggctgacggcgaacCCT‑GCAGGAGCgg < 2:401335‑M1/13‑1 (MQ=255) aagaaaccgaagtgaagttcgacacttccaagctggaagccggtggtgactacagcttcttctgcaccttcccgggccacatctcgatgatgaaaggcaaggtcatcgtcaagtaatcaaaggctgacggcgaacCCT‑GCAGGAGCggg > 1:401335‑M1/136‑149 (MQ=255) aagaaaccgaagtgaagttcgacacttccaagctggaagccggtggtgactacagcttcttctgcaccttcccgggccacatctcgatgatgaaaggcaaggtcatcgtcaagtaatcaaaggctgacggcgaacCCT‑GCAGGAGCgg > 2:64813‑M1/136‑148 (MQ=255) aTGGCGTGACCTACGCGCAGATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCT‑GCAGGAGCggg < 5:387246/149‑1 (MQ=255) gaaaccgaagtgaagttcgacacttccaagctggaagccggtggtgactacagcttcttctgcaccttcccgggccacatctcgatgatgaaaggcaaggtcatcgtcaagtaatcaaaggctgacggcgaacCCT‑GCAGGAGCGGGtt < 7:230964‑M1/16‑1 (MQ=255) gCGTGACCTACGCGCAGATCGATGCCTTCCTGCATGGGCAGCCGGTTCACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCT‑GCAGGAGCGGGtt < 8:199493/148‑1 (MQ=255) gACCTACGCGCAGATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTATCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCT‑GCAGGAGCGGGTTCAc > 8:276847/1‑147 (MQ=255) gACCTACGCGCAGATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTATCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCT‑GCAGGAGCGGGTTCAc < 7:276847/147‑1 (MQ=255) ccTACGCGCAGATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCT‑GCAGGAGCGGGTTCACCcgc < 6:69017/149‑1 (MQ=255) aagtgaagttcgacacttccaagctggaagccggtggtgactacagcttcttctgcaccttcccgggccacatctcgatgatgaaaggcaaggtcatcgtcaagtaatcaaaggctgacggcgaacCCT‑GCAGGAGCGGGTTCACCcgc < 7:143500‑M1/23‑1 (MQ=255) gcgcAGATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCT‑GCAGGAGCGGGTTCACCCTCGTAtt > 3:146800/1‑148 (MQ=255) cAGATCGATGCCTTCCTGCATGGGCATCCGGTTGACCAGTCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCT‑TCAGGAGCGGGTTCACCCGCGAATACGa < 4:203402/149‑1 (MQ=255) gATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCT‑GCAGGAGCGGGTTCACCCGCGAATACGAgg < 3:312142/149‑1 (MQ=255) gATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCT‑GCAGGAGCGGGTTCACCCGCGAATACGAgg < 6:268158/149‑1 (MQ=255) gATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCT‑GCAGGAGCGGGTTCACCCTCGTATTCGCGGGTGa < 4:146800/149‑1 (MQ=255) ttccaagctggaagccggtggtgactacagcttcttctgcaccttcccgggccacatctcgatgatgaaaggcaaggtcatcgtcaagtaatcaaaggctgacggcgaacCCT‑GCAGGAGCggg > 5:293717‑M1/111‑124 (MQ=255) ttccaagctggaagccggtggtgactacagcttcttctgcaccttcccgggccacatctcgatgatgaaaggcaaggtcatcgtcaagtaatcaaaggctgacggcgaacCCT‑GCAGGAGCggg < 6:293717‑M1/14‑1 (MQ=255) ttCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCT‑GCAGGAGCGGGTTCACCCGCGAATGCGTCGGTgggttcac > 2:105403/1‑142 (MQ=38) cttggaagccggtggtgactacagcttcttctgcaccttcccgggccacatctcgatgatgaaaggcaaggtcatcgtcaagtaatcaaaggctgacggcgaacCCT‑GCAGGAGCGGGTTCACCCGCGa > 7:76179‑M1/105‑129 (MQ=255) cttggaagccggtggtgactacagcttcttctgcaccttcccgggccacatctcgatgatgaaaggcaaggtcatcgtcaagtaatcaaaggctgacggcgaacCCT‑GCAGGAGCGGGTTCACCCGCGa < 8:76179‑M1/25‑1 (MQ=255) cATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCT‑g < 4:43000/104‑1 (MQ=255) cATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCT‑g > 3:43000/1‑104 (MQ=255) cAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCACGACCCCGCACAAGCGCGAACTGCCGGTCGCTCCTTGATAAGTGGCCT‑GCAGGAGCGGGTTCACCCGCGAATACGAGTGTGAACCCACCGACGCATTcgc < 1:238289/149‑1 (MQ=255) cAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCT‑GCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTcgc < 8:320690/149‑1 (MQ=255) aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCT‑GCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTcgcg > 7:344109/1‑149 (MQ=255) tggtgactacagcttcttctgcaccttcccgggccacatctcgatgatgaaaggcaaggtcatcgtcaagtaatcaaaggctgacggcgaacCCT‑GCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCgg > 8:230964‑M1/93‑149 (MQ=255) gCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCT‑GCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCgg < 3:457/149‑1 (MQ=255) ccGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTCGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCgg < 1:105403/149‑1 (MQ=25) cGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCT‑GCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGt < 6:161891/149‑1 (MQ=255) ttGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCTGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCT‑GCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGaa < 8:344109/149‑1 (MQ=255) cAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCT‑GCAGGAGCggg > 6:66986/1‑96 (MQ=255) cAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCT‑GCAGGAGCggg < 5:66986/96‑1 (MQ=255) cttcttctgcaccttcccgggccacatctcgatgatgaaaggcaaggtcatcgtcaagtaatcaaaggctgacggcgaacCCT‑GCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTcgc > 6:3988‑M1/81‑135 (MQ=255) cttcttctgcaccttcccgggccacatctcgatgatgaaaggcaaggtcatcgtcaagtaatcaaaggctgacggcgaacCCT‑GCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTcgc < 5:3988‑M1/55‑1 (MQ=255) tcgtcgCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCT‑GCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTc > 4:258612/1‑149 (MQ=255) gCTCCTTGATAAGTGGCCT‑GCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGAtgt < 3:258612/149‑1 (MQ=255) | ACGAGGCGTCACATGGCGTGACCTACGCGCAGATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCT‑GCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGT > NC_002947/5536884‑5537163 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |