New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5540637 =	68 (1.040)	4 (0.060)	3/256	NT	5.8%	coding (349/2355 nt)	PP_4872	hypothetical protein
	?	NC_002947	5540669 =	63 (1.000)					coding (317/2355 nt)	PP_4872	hypothetical protein

CTTGTAGGCCTCCTTGCAGCGCTGGCTATACACCAGGCTGGCACGGTCCGGACGGCTGCCGGCCAGGCCACCAGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTGGGCGATGATGCCCACGCGGAAGCCTTGGGCTTCCAGCAGACGGCCAATGATGGCCATGCCGAACGACGGATGGT  >  NC_002947/5540491‑5540780                                                                                                                                                   |                                                                                                                                                 cTTGTAGGCCTCCTTGCAGCGCTGGCTATACACCAGGCTGGCACGGTCCGGACGGCTGCCGGCCAGGCCACCAGGGGTGTAGGCATCGGCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCcggcgg                                                                                                                                                <  3:395113/149‑1 (MQ=255)  ttGTAGGCCTCCTTGCAGCGCTGGCTATACACCAGGCTGGCACGGTCCGGACGGCTGCCGGCCAGGCCACCAGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCggcggc                                                                                                                                               >  2:181261/1‑149 (MQ=255)  ttGTAGGCCTCCTTGCAGCGCTGGCTATACACCAGGCTGGCACGGTCCGGACGGCTGCCGGCCAGGCCACCAGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCggcggc                                                                                                                                               >  2:210197/1‑149 (MQ=255)    gTAGGCCTCCTTGCAGCGCTGGCTATACACCAGGCTGGCACGGTCCGGACGGCTGCCGGCCAGGCCACCAGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCggcggc                                                                                                                                               <  4:281502/147‑1 (MQ=255)    gTAGGCCTCCTTGCAGCGCTGGCTATACACCAGGCTGGCACGGTCCGGACGGCTGCCGGCCAGGCCACCAGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCca                                                                                                                                             >  2:235175/1‑149 (MQ=255)      aGGCCTCCTTGCAGCGCTGGCTATACACCAGGCTGGCACGGTCCGGACGGCTGCCGGCCAGGCCACCAGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCcaca                                                                                                                                           >  1:154467/1‑149 (MQ=255)       ggCCTCCTTGCAGCGCTGGCTATACACCAGGCTGGCACGGTCCGGACGGCTGCCGGCCAGGCCACCAGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCacac                                                                                                                                          <  8:49709/149‑1 (MQ=255)               gaccggtgatgcctacgtcgaccatccgtcgttcggcatggccatcattggccgtctgctggaagcccaaggcttccgcgtgggcatcatcgcccagccgaactggcagtcgaaagacgacttcatgaagctCgg                                                                                                                                                <  8:202905‑M1/3‑1 (MQ=255)               gaccggtgatgcctacgtcgaccatccgtcgttcggcatggccatcattggccgtctgctggaagcccaaggcttccgcgtgggcatcatcgcccagccgaactggcagtcgaaagacgacttcatgaagctCgg                                                                                                                                                >  7:202905‑M1/133‑135 (MQ=255)                gCAGCGCTGGCTATACACCAGGCTGGCACGGTCCGGACGGCTGCCGGCCAGGCCACCAGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAAc                                                                                                                                  <  5:83355/148‑1 (MQ=255)                  aGCGCTGGCTATACACCAGGCTGGCACGGTCCGGACGGCTGCCGGCCAGGCCACCAGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCAACACCGAAGAACA‑gg                                                                                                                              >  5:253631/1‑149 (MQ=255)                     gcTGGCTATACACCAGGCTGGCACGGTCCGGACGGCTGCCGGCCAGGCCACCAGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑ggttc                                                                                                                           <  6:5726/149‑1 (MQ=255)                         gCTATACACCAGGCTGGCACGGTCCGGACGGCTGCCGGCCAGGCCACCAGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑ggttcggtt                                                                                                                       >  1:403373/1‑149 (MQ=255)                         gCTATACACCAGGCTGGCACGGTCCGGACGGCTGCCGGCCAGGCCACCAGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑ggttcggt                                                                                                                        <  1:181261/148‑1 (MQ=255)                           tataCACCAGGCTGGCACGGTCCGGACGGCTGCCGGCCAGGCCACCAGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑Ggttcggttcg                                                                                                                     >  4:240164/1‑149 (MQ=255)                             taCACCAGGCTGGCACGGTCCGGACGGCTGCCGGCCAGGCCACCAGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑Ggttcggttcg                                                                                                                     <  1:235175/147‑1 (MQ=255)                             taCACCAGGCTGGCACGGTCCGGACGGCTGCCGGCCAGGCCACCAGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGc                                                                                                                    <  6:308886/148‑1 (MQ=255)                               ttcgaccatccgtcgttcggcatggccatcattggccgtctgctggaagcccaaggcttccgcgtgggcatcatcgcccagccgaactggcagtcgaaagacgacttcatgaagctCGGCCACACCGAAGAACA‑GGTTCGGTTCGcc                                                                                                                   <  2:336784‑M1/31‑1 (MQ=255)                                acCAGGCTGGCACGGTCCGGACGGCTGCCGGCCAGGCCACCAGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAg                                                                                                                >  8:94230/1‑149 (MQ=255)                                  cAGGCTGGCACGGTCCGGACGGCTGCCGGCCAGGCCACCAGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCt                                                                                                              <  8:25700/149‑1 (MQ=255)                                  cAGGCTGGCACGGTCCGGACGGCTGCCGGCCAGGCCACCAGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCt                                                                                                              >  5:397378/1‑149 (MQ=255)                                    ccatccgtcgttcggcatggccatcattggccgtctgctggaagcccaaggcttccgcgtgggcatcatcgcccagccgaactggcagtcgaaagacgacttcatgaagctCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTc                                                                                                            >  5:178912‑M1/112‑149 (MQ=255)                                     catccgtcgttcggcatggccatcattggccgtctgctggaagcccaaggcttccgcgtgggcatcatcgcccagccgaactggcagtcgaaagacgacttcatgaagctCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCa                                                                                                           >  1:336784‑M1/111‑149 (MQ=255)                                       tGGCACGGTCCGGACGGCTGCCGGCCAGGCCACCAGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCAt                                                                                                          >  1:263011/1‑148 (MQ=255)                                       tGGCACGGTCCGGACGGCTGCCGGCCAGGCCACCAGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCAt                                                                                                          >  4:310389/1‑148 (MQ=255)                                         gCACGGTCCGGACGGCTGCCGGCCAGGCCACCAGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATg                                                                                                         >  5:72597/1‑147 (MQ=255)                                         gCACGGTCCGGACGGCTGCCGGCCAGGCCACCAGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGaa                                                                                                       >  4:88084/1‑149 (MQ=255)                                         gCACGGTCCGGACGGCTGCCGGCCAGGCCACCAGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACAGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGaa                                                                                                       >  8:142248/1‑149 (MQ=255)                                         cgtcgttcggcatggccatcattggccgtctgctggaagcccaaggcttccgcgtgggcatcatcgcccagccgaactggcagtcgaaagacgacttcatgaagctCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGaa                                                                                                       >  2:234580‑M1/107‑149 (MQ=255)                                          cACGGTCCGGACGGCTGCCGGCCAGGCCACCAGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAg                                                                                                      <  5:300649/149‑1 (MQ=255)                                             ggTCCGGACGGCTGCCGGCCAGGCCACCAGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACAGGGTTCGGTTCGCCGAGCTTCATGAAgtc                                                                                                    <  1:210197/149‑1 (MQ=255)                                              gTCCGGACGGCTGCCGGCCAGGCCACCAGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAgtcgt                                                                                                  >  7:191293/1‑149 (MQ=255)                                                  ggACGGCTGCCGGCCAGGCCACCAGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCttt                                                                                              <  3:310389/149‑1 (MQ=255)                                                   gACGGCTGCCGGCCAGGCCACCAGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTc                                                                                             <  7:98690/149‑1 (MQ=255)                                                      ggCTGCCGGCCAGGCCACCAGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGAc                                                                                          <  6:72597/149‑1 (MQ=255)                                                      ggCTGCCGGCCAGGCCACCAGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGAc                                                                                          >  1:97734/1‑149 (MQ=255)                                                      ggCTGCCGGCCAGGCCACCAGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGAc                                                                                          <  3:240164/149‑1 (MQ=255)                                                           ccGGCCAGGCCACCAGGTGTGTAGTAATCGTAGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATAGAGTCCATGTTGCATGCGGACAAACCAAACAAAC‑TGTTCGTTACGCACAGCTTCATGAAGTCTTCTATCGAATGcaa                                                                                     >  8:146131/1‑147 (MQ=255)                                                           ccGGCCAGGCCACCAGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGc                                                                                       <  2:22576/147‑1 (MQ=255)                                                              gccaggccaCCAGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGtt                                                                                  >  5:145553/1‑149 (MQ=255)                                                               ccaggccaCCAGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTc                                                                                 <  8:191293/149‑1 (MQ=255)                                                                      accaGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTggg                                                                          >  2:3545/1‑149 (MQ=255)                                                                      accaGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTggg                                                                          <  2:97734/149‑1 (MQ=255)                                                                         gcggaagccttgggcttccgcgtgggcatcatcgcccagccgaactggcagtcgaaagacgacttcatgaagctCg                                                                                                                                                 >  4:308577‑M1/75‑76 (MQ=255)                                                                         gcggaagccttgggcttccgcgtgggcatcatcgcccagccgaactggcagtcgaaagacgacttcatgaagctCg                                                                                                                                                 <  3:308577‑M1/2‑1 (MQ=255)                                                                         aGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGCCTGGGCga                                                                       >  8:209623/1‑149 (MQ=255)                                                                           gggTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTGGGCgatg                                                                     <  2:154467/149‑1 (MQ=255)                                                                                  ggCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTGGGCGATGATGCCCa                                                              >  3:364928/1‑149 (MQ=255)                                                                                               cGGATCTTCTTGTCCGCTGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTGGGCGATGATGCCCACGCGGAAGCCTTg                                                 <  6:145553/149‑1 (MQ=255)                                                                                               cGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTGGGCGATGATGCCCACGCGGAAGCCTTg                                                 <  6:397378/149‑1 (MQ=255)                                                                                               cGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTGGGCGATGATGCCCACGCGGAAGCCTTg                                                 <  2:263011/149‑1 (MQ=255)                                                                                                ggATCTTCTTGTCCGGGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTGGGCGATGATGCCCACGCGGAAGCCTTgg                                                <  7:146131/149‑1 (MQ=255)                                                                                                ggATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTGGGCGATGATGCCCACGCGGAAGCCTTgg                                                >  5:320106/1‑149 (MQ=255)                                                                                                ggATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTGGGCGATGATGCCCACGCGGAAGCCTTgg                                                <  3:310534/149‑1 (MQ=255)                                                                                                  ctcttctTGTCCGCGGGGTCGCGGTTGATCATCGAGTCCCTTTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTGGGCGATGCTGCCCACGCGGAAGCCTTGGGc                                              <  7:61596/148‑1 (MQ=255)                                                                                                   tcttctTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTGGGCGATGATGCCCACGCGGAAGCCTTGGGCt                                             >  5:182411/1‑149 (MQ=255)                                                                                                      tcttGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTGGGCGATGATGCCCACGCGGAAGCCTTGGGCTTc                                           >  7:117232/1‑148 (MQ=255)                                                                                                       cttGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTGGGCGATGATGCCCACGCGGAAGCCTTGGGc                                              <  2:381568/144‑1 (MQ=255)                                                                                                       cttGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTGGGCGATGATGCCCACGCGGAAGCCTTGGGCTTc                                           <  6:253631/147‑1 (MQ=255)                                                                                                       cttGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCAGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTGGGCGATGATGCCCACGCGGAAGCCTTGGGCTTcc                                          <  2:403373/148‑1 (MQ=255)                                                                                                          gTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTGGGCGATGATGCCCACGCGGAAGCCTTGGGCTTCca                                         <  7:94230/146‑1 (MQ=255)                                                                                                           tCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTGGGCGATGATGCCCACGCGGAAGCCTTGGGCTTCcag                                        >  8:195364/1‑146 (MQ=255)                                                                                                           tCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTGGGCGATGATGCCCACGCGGAAGCCTTGGGCTTCca                                         <  6:164654/145‑1 (MQ=255)                                                                                                           tCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTGGGCGATGATGCCCACGCGGAAGCCTTGGGCTTCca                                         >  5:164654/1‑145 (MQ=255)                                                                                                                ggTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTGGGCGATGATGCCCACGCGGAAGCCTTGGGCTTCCAGCAGACGGc                                <  1:3545/149‑1 (MQ=255)                                                                                                                   gtAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTGGGCGATGATGCCCACGCGGAAGCCTTGGGCTTCCAGCAGACGGCCaa                             >  7:380025/1‑149 (MQ=255)                                                                                                                    tAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTGGGCGATGATGCCCACGCGGAAGCCTTGGGCTTCCAGCAGACGGCCaa                             <  8:380025/148‑1 (MQ=255)                                                                                                                    tAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTGGGCGATGATGCCCACGCGGAAGCCTTGGGCTTCCAGCAGACGGCCAat                            >  7:20712/1‑149 (MQ=255)                                                                                                                     aGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTGGGCGATGATGc                                                                 <  7:240608/111‑1 (MQ=255)                                                                                                                     aGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTGGGCGATGATGc                                                                 >  8:240608/1‑111 (MQ=255)                                                                                                                       gggTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTGGGCGATGATTCCCACGCGGAAGCATTGGGCTTCCAGCAGACGGCCAatgat                         <  7:209623/148‑1 (MQ=255)                                                                                                                         gTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTGGGCGATGATGCCCACGCGGAAGCCTTGGGCTTCCAGCAGACGGCCAATGATgg                       <  7:195364/149‑1 (MQ=255)                                                                                                                                 tcGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTGGGCGATGATGCCCACGCGGAAGCCTTGGGCTTCca                                         <  5:47601/123‑1 (MQ=255)                                                                                                                                 tcGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTGGGCGATGATGCCCACGCGGAAGCCTTGGGCTTCca                                         >  6:47601/1‑123 (MQ=255)                                                                                                                                 tcGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTGGGCGATGATGCCCACGCGGAAGCCTTGGGCTTCCAGCAGACGGCCAATGATGGCCATGcc                >  3:374499/1‑148 (MQ=255)                                                                                                                                 tcGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTGGGCGATGATGCCCACGCGGAAGCCTTGGGCTTCCAGCAGACGGCCAATGATGGCCATGcc                >  3:246507/1‑148 (MQ=255)                                                                                                                                     gTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTGGGCGATGATGCCCACGCGGAAGCCTTGGGCTTCCAGCAGACGGCCAATGATGGCCATGCCGAac            >  5:115012/1‑148 (MQ=255)                                                                                                                                        cATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTGGGCGATGATGCCCACGCGGAAGCCTTGGGCTTCCAGCAGACGGCCAATGATGGCCATGCCGAacgacg        >  1:250760/1‑149 (MQ=255)                                                                                                                                        cATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTGGGCGATGATGCCCACGCGGAAGCCTTGGGCTTCCAGCAGACGGCCAATGATGGCCATGCCGAacgac         <  6:115012/148‑1 (MQ=255)                                                                                                                                            ttGCCGGCGGCCACACCGAAGAACA‑GGTTCGGATCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTGGGCGATGATGCCCACGCGGAAGCCTTGGGCTTCCAGCAGACGGCCAATGATGGCCATGCCGAACGACGGAt     <  3:282037/148‑1 (MQ=255)                                                                                                                                               ccGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTTCCAGTTCGGCTGGGCGATGATGCCCACGCGGAAGCCTTTGGCTTCCAGCAGACGGCCAATGATGGCCATGCCGAACGACGGATGGt  <  8:20712/148‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                 CTTGTAGGCCTCCTTGCAGCGCTGGCTATACACCAGGCTGGCACGGTCCGGACGGCTGCCGGCCAGGCCACCAGGGGTGTAGGCATCGTCGGAACGGATCTTCTTGTCCGCGGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCGGCCACACCGAAGAACA‑GGTTCGGTTCGCCGAGCTTCATGAAGTCGTCTTTCGACTGCCAGTTCGGCTGGGCGATGATGCCCACGCGGAAGCCTTGGGCTTCCAGCAGACGGCCAATGATGGCCATGCCGAACGACGGATGGT  >  NC_002947/5540491‑5540780

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.