New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5698727 =	56 (0.860)	4 (0.070)	4/230	NT	9.8%	intergenic (+17/‑150)	hslU/PP_5002	protease HslVU ATPase subunit/hypothetical protein
	?	NC_002947	5698810 =	25 (0.440)					intergenic (+100/‑67)	hslU/PP_5002	protease HslVU ATPase subunit/hypothetical protein

TGTCGTTCAGTGCGGGCGACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCT‑‑‑CCTGCA‑CGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATT  >  NC_002947/5698583‑5698870                                                                                                                                                 |                                                                                                                                                    tgtCGTTCAGTGCGGGCGACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTATAAGACCGGTTTCGACAGTTTcgc                                                                                                                                                 <  4:270342/149‑1 (MQ=255)   ttgTTCAGTGCGGGCGACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTcgcg                                                                                                                                                <  4:126002/146‑1 (MQ=255)   tCGTTCAGTGCGGGCGACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTcgcg                                                                                                                                                <  8:200453/148‑1 (MQ=255)   tCGTTCAGTGCGGGCGACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCgg                                                                                                                                               <  6:160076/149‑1 (MQ=255)   tCGTTCAGTGCGGGCGACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCgg                                                                                                                                               <  6:228148/149‑1 (MQ=255)    tcgccgggtgcgtaggtgaggctgagggtcttggaggctttgtgcaggttgatggcggtaggcaggcgggccatgggcagaatctctcgggagctgatgaagcacagcttccagcttatgggggagggattcaagggcctcTTCGCggg                                                                                                                                              <  3:67730‑M1/8‑1 (MQ=255)     cgccgggtgcgtaggtgaggctgagggtcttggaggctttgtgcaggttgatggcggtaggcaggcgggccatgggcagaatctctcgggagctgatgaagcacagcttccagcttatgggggagggattcaagggcctcTTCGCggg                                                                                                                                              <  7:121249‑M1/8‑1 (MQ=255)      ttCAGTGCGGGCGACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGc                                                                                                                                             >  6:356062/1‑148 (MQ=255)         aGTGCGGGCGACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGc                                                                                                                                         <  6:165350/149‑1 (MQ=255)         aGTGCGGGCGACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGc                                                                                                                                         <  1:274618/149‑1 (MQ=255)             cGGGCGACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGc                                                                                                                                     <  3:235489/149‑1 (MQ=255)                     cTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCT‑‑‑c                                                                                                                                <  1:297530/143‑1 (MQ=255)                     cTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCT‑‑‑c                                                                                                                                >  2:297530/1‑143 (MQ=255)                     cTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCT‑‑‑CCTGCA‑c                                                                                                                         <  5:203642/149‑1 (MQ=255)                        gCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCT‑‑‑CCTGCA‑cgc                                                                                                                       <  4:305675/148‑1 (MQ=255)                                ccATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCCAGCCCGCG‑‑‑ACAGCA‑CGCCCccccac                                                                                                               >  7:149611/1‑148 (MQ=255)                                ccATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCT‑‑‑CCTGCA‑CGCGCcaccac                                                                                                               >  7:291843/1‑148 (MQ=255)                                ccATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCT‑‑‑CCTGCA‑CGCGCcaccac                                                                                                               >  4:317821/1‑148 (MQ=255)                                  aTGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCT‑‑‑TCTGCA‑CGCGCCACCACAAc                                                                                                            >  6:398707/1‑149 (MQ=255)                                   tGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTcgcg                                                                                                                                                <  8:269511/116‑1 (MQ=255)                                   tGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTcgcg                                                                                                                                                >  7:269511/1‑116 (MQ=255)                                    gACGAAGCGCCGATCCAGATAGACGCGGCCAATCTGAACAGCCACCTGGCTGATCTGTCACAGAACGAACACCTCACGCGTTACATTCTGTAAGACAGGTTTAGACACTTACGCCGCCAATCCCCCT‑‑‑CCATCA‑CGCGCCACCACAAcc                                                                                                           >  1:201693/1‑148 (MQ=255)                                       gccgcgtCGATCTGGATCGGCGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCT‑‑‑CCTGCA‑CGCGCCACCACAACCCTTg                                                                                                       >  2:5703/4‑149 (MQ=255)                                       gAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCTGGCAAGCCCGCT‑‑‑CCTGCA‑Cgcgc                                                                                                                     <  5:159646/135‑1 (MQ=255)                                       gAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCT‑‑‑CCTGCA‑Cgcgc                                                                                                                     >  6:159646/1‑135 (MQ=255)                                       gAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCT‑‑‑CCTGCA‑CGCGCCACCACAACCCTTg                                                                                                       <  3:111739/149‑1 (MQ=255)                                        aaGCGCCGATCCAGATCGACGCTGCGTATGTCATCTGCCTCCTGGGTGAGCTTGCACAGAACGAAGACCTGGCGCGGTACATTCTGTAAGACCGGCTTCGACAGTTTCTCGGGCAAGCCCGCT‑‑‑CCTGCA‑CGCGCCAACACAACCCTggg                                                                                                      <  8:14726/149‑1 (MQ=255)                                        aaGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCT‑‑‑TCTGCA‑CGCGCCACCACAACCCTTgg                                                                                                      <  5:398707/149‑1 (MQ=255)                                        aaGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCT‑‑‑CCTGCA‑CGCGCCACCACAACCCTTgg                                                                                                      <  2:84964/149‑1 (MQ=255)                                        aaGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCT‑‑‑CCTGCA‑CGCGCCACCACAACCCTTgg                                                                                                      <  8:237155/149‑1 (MQ=255)                                            gcCGATCCAGATCGACGCTGCGTATGTGAAGAGCCACCTGTGTGATATGTCACAGAACGATGACCTGTCGCGTTACATTCTGTAAGACCGTTTTCGACAGTTTCGCGGGCAAGCCAGCT‑‑‑CCTGCA‑CGCGCCACAACAACCCTTGGGCCt                                                                                                  <  2:201693/149‑1 (MQ=255)                                             ccGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCGAACCCCCG‑‑‑CCAGCC‑CCCCCCACCCCACCCCATTGGccgg                                                                                                 >  2:310578/1‑147 (MQ=255)                                             ccGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCT‑‑‑CCTGc                                                                                                                            <  3:57368/123‑1 (MQ=255)                                             ccGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCT‑‑‑CCTGc                                                                                                                            >  4:57368/1‑123 (MQ=255)                                             ccGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCT‑‑‑CCTGCA‑CGCGCCACCACAACCCTTGGGCCtg                                                                                                 >  1:96205/1‑149 (MQ=255)                                               gATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCT‑‑‑CCTGCA‑CGCGCCACCACAACCCTTGGGCCtgtg                                                                                               <  8:291843/149‑1 (MQ=255)                                               gATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCT‑‑‑CCTGCA‑CGCGCCACCACAACCCTTGGGCCtgtg                                                                                               <  1:284104/149‑1 (MQ=255)                                                aTCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCT‑‑‑CCTGCA‑CGCGCCACCACAACCCTTGGGCCTgtgg                                                                                              <  3:317821/149‑1 (MQ=255)                                                 tCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCT‑‑‑CCTGCA‑CGCGCCACCACAACCCTTGGGCCTgtggt                                                                                             <  2:96205/149‑1 (MQ=255)                                                  ccAGATCGGCGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCT‑‑‑CCTGCA‑CGCGCCACCACAACCCTTGGGCCTgtggt                                                                                             >  6:230487/1‑148 (MQ=255)                                                   cAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCT‑‑‑CCTGCA‑CGCGCCACCACAACCCTTGGGCCTgtggtg                                                                                            <  1:50427/148‑1 (MQ=255)                                                     gATCGGCGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCT‑‑‑CCTGCACCGCGCCACCACAACCCTTGGGCCtgtg                                                                                               <  1:5703/144‑1 (MQ=255)                                                            gcggcgTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCT‑‑‑CCTGCA‑CGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCgg                                                                                  <  2:266803/149‑1 (MQ=255)                                                                ggcaggcgggccatgggcagaatctctcgggagctgatgaagcacagcttccagcttatgggggagggattcaagggcctcTTCGCGGGCAAGCCCGCT‑‑‑CCTGCA‑CGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGgggc                                                                              >  1:169951‑M1/82‑149 (MQ=255)                                                                 caggcgggccatgggcagaatctctcgggagctgtatgaagcacagcttccagcttatgggggagggattcaagggccgcTTCGCGGGCAAGCCCGCT‑‑‑CCTGCA‑CCCGCCACCACAACCCTTGGGCCGGTGGTGATCCGt                                                                                      <  1:60377‑M1/60‑1 (MQ=255)                                                                  tATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCT‑‑‑CCTGCA‑CGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGgggcgg                                                                            <  5:230487/149‑1 (MQ=255)                                                                  caggcgggccatgggcagaatctctcgggagctgatgaagcacagcttccagcttatgggggagggattcaagggcctcTTCGCGGGCAAGCCCGCT‑‑‑CCTGCA‑CGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGt                                                                                      >  2:60377‑M1/80‑139 (MQ=255)                                                                   aggcgggccatgggcagaatctctcgggagctgatgaagcacagcttccagcttatgggggagggattcaagggcctcTTCGCGGGCAAGCCCGCT‑‑‑CCTGCA‑CGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGgggcggg                                                                           >  8:27775‑M1/79‑149 (MQ=255)                                                                       gAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCT‑‑‑CCTGCA‑CGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGt                                                                                      >  1:28315/1‑134 (MQ=255)                                                                       gAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCT‑‑‑CCTGCA‑CGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGt                                                                                      <  2:28315/134‑1 (MQ=255)                                                                            ccccccTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCT‑‑‑CCTGCA‑CGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCcgc                                                                  <  3:96157/145‑1 (MQ=255)                                                                                 cTGGGTCAGCTGGCAAATAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGCCAAGCCCGCT‑‑‑CCTGCA‑CGCGCCACCAAAACCCTTGGGCGTGTGGTTATCCGGGGGGGGGCGGGCTTGCCCGCGAaga                                                             <  6:7036/149‑1 (MQ=255)                                                                                        aGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCT‑‑‑CCTGCA‑CGCGCCACCACAACCCTTGGGCCTGTGGTTATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCtt                                                      <  2:298977/149‑1 (MQ=255)                                                                                          cTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCCAGCCCGCG‑‑‑CCAGCA‑CCCGCCCCCCCAACCCATTGGGCAGTGGGGATACGTGAGGGGGGCGGGGTGCCCGCCAAGAAGcccatt                                                     >  8:121249/1‑145 (MQ=255)                                                                                           tGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCCAGCCCCCA‑‑‑CCAGCA‑CCCGCCACCCCAACCCATGGGGCGGTGGTGTTACGGGGGGGGGCGGGGGTTGCCGCGGAGAGGgccgtta                                                    >  6:80463/1‑144 (MQ=255)                                                                                               acaGAAAGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCCAGCCCCCG‑‑‑CCAGCA‑CACCCCCCCCCAAACCAATGGCCAGTGGGGCAACGGGGCGGGGCCGGCATGGCCCCGCACAGGCCCATGaaaca                                                >  6:317700/1‑145 (MQ=255)                                                                                                         gACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCT‑‑‑CCTGCA‑CGCGCCACCACAACCCTTGGGCCTGTGGTTCTCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATaa                                     <  1:310578/149‑1 (MQ=255)                                                                                                                 gcgTTACATTCTGTAAGACCGTTTTCGACAGTTTCGCGGGCAAGCCCGCT‑‑‑CCTGCA‑CGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGaa                              <  5:180213/148‑1 (MQ=255)                                                                                                                  cgTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCT‑‑‑CCTGCA‑CGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGc                                                                      <  2:118707/107‑1 (MQ=255)                                                                                                                       cATTCTTTAAGACCGGTTTCTACAGTTTCGCGGGCAAGCCCGCT‑‑‑CCTGCA‑CGCGCCACCAAAACCCTTGGGCCTGTGGTGATCCGGGGGGGGGGGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGc                       <  7:56109/149‑1 (MQ=255)                                                                                                                        aTTCTGTAAGACCGGTTTCGCCATTTTCGCGGGCAAGCCCGCTCTCCCTGCC‑CGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAaga                                                             <  1:121180/113‑1 (MQ=37)                                                                                                                              tAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCT‑‑‑CCTGCA‑CGCGCCACCACAACCCTTGGGCCTGTGGTTATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTtca                   <  5:356062/146‑1 (MQ=255)                                                                                                                                  aCCGGTTTCGACAGTTTCGCGGGCAAGCCCGCT‑‑‑CCTGCA‑CGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTc            <  7:102536/149‑1 (MQ=255)                                                                                                                                            aCAGTTTCGCGGGCAAGCCCGCT‑‑‑CCTGCA‑CGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGAtt  <  5:80463/149‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                    TGTCGTTCAGTGCGGGCGACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCT‑‑‑CCTGCA‑CGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATT  >  NC_002947/5698583‑5698870

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.