New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5811876	69 (1.060)	4 (0.060)	4/250	NT	6.0%	coding (1204/2220 nt)	priA	primosome assembly protein
	?	NC_002947	= 5811907	59 (0.960)					coding (1235/2220 nt)	priA	primosome assembly protein

ATCCCGATCCTGCTCGGTTCCGCCACACCGTCGCTGGAAACCCTGCATAACGCCCTGACCGGCCGCTACCGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCCAACAAGTGCTGGTGTTCCTCAACCGCCGCGGCTTTGCCCCAACCTTGCTGTGCCACGATTGCGGCTGGCTGTCCGAATGCC  >  NC_002947/5811732‑5812020                                                                                                                                                 |                                                                                                                                                 aTCCCGATCCTGCTCGGTTCCGCCACACCGTAGCTGGAAACCCTGCATAACGCCCTGACCGGCCGCTACCGCCTGATGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACt                                                                                                                                              >  5:265869/1‑149 (MQ=255)  tCCCGATCCTGCTCGGTTCCGCCACACCGTCGCTGGAAACCCTGCATAACGCCCTGACCGGCCGCTACCGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTg                                                                                                                                             <  3:140107/149‑1 (MQ=255)   cccGATCCTGCTCGGTTCCGCCACACCGTCGCTGGAAACCCTGCATAACGCCCTGACCGGCCGCTACCGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTg                                                                                                                                             >  1:19595/1‑148 (MQ=255)     cGATCCTGCTCGGTTCCGCCACACCGTCGCTGGAAACCCTGCATAACGCCCTGACCGGCCGCTACCGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGa                                                                                                                                           >  3:179416/1‑148 (MQ=255)      gATCCTGCTCGGTTCCGCCACACCGTCGCTGGAAACCCTGCATAACGCCCTGACCGGCCGCTACCGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGa                                                                                                                                           >  2:184676/1‑147 (MQ=255)        tCCTGCTCGGTTCCGCCACACCGTCGCTGGAAACCCTGCATAACGCCCTGACCGGCCGCTACCGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGc                                                                                                                                       >  7:191558/1‑149 (MQ=255)                ggTTCCGCCACACCGTCGCTGGAAACCCTGCATAACGCCCTGACCGGCCGCTACCGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAg                                                                                                                               >  7:159907/1‑149 (MQ=255)                 gTTCCGCCACACCGTCGCTGGATACCCTGCATAACGCCCTGACCGGCCGCTACCGACTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGt                                                                                                                              >  6:240805/1‑149 (MQ=255)                 gTTCCGCCACACCGTCGCTGGAAACCCTGCATAACGCCCTGACCGGCCGCTACCGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGt                                                                                                                              <  8:191558/149‑1 (MQ=255)                 gTTCCGCCACACCGTCGCTGGAAACCCTGCATAACGCCCTGACCGGCCGCTACCGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGt                                                                                                                              <  4:291972/149‑1 (MQ=255)                   tCCGCCACACCGTCGCTGGAAACCCTGCATAACGCCCTGACCGGCCGCTACCGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAg                                                                                                                                        >  4:359932/1‑137 (MQ=255)                   tCCGCCACACCGTCGCTGGAAACCCTGCATAACGCCCTGACCGGCCGCTACCGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAg                                                                                                                                        <  3:359932/137‑1 (MQ=255)                    ccGCCACACCGTCGCTGGAAACCCTGCATAACGCCCTGACCGGCCGCTACCGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTgg                                                                                                                            <  3:304313/148‑1 (MQ=255)                        cacaCCGTCGCTGGAAACCCTGCATAACGCCCTGACCGGCCGCTACCGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGc                                                                                                                       >  6:371738/1‑149 (MQ=255)                        cacaCCGTCGCTGGAAACCCTGCATAACGCCCTGACCGGCCGCTACCGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGc                                                                                                                       <  5:399118/149‑1 (MQ=255)                           acCGTCGCTGGAAACCCTGCATAACGCCCTGACCGGCCGCTACCGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTgc                                                                                                                    <  5:371738/149‑1 (MQ=255)                           acCGTCGCTGGAAACCCTGCATAACGCCCTGACCGGCCGCTACCGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTg                                                                                                                     >  5:307741/1‑148 (MQ=255)                             cGTCGCTGGAAACCCTGCATAACGCCCTGACCGGCCGCTACCGCCTGCTGCGTATGAACCTACGGGCCGGAGGGGCTCGCCCGCCGCGCATGCTGCGCGTTGATGTGAAGAGCCTGCCACTg                                                                                                                                             <  5:318119/122‑1 (MQ=255)                             cGTCGCTGGAAACCCTGCATAACGCCCTGACCCGCCGCAACCGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCCCATGCTGAGCCTTGATGTGAAGCGCCTGCCACTg                                                                                                                                             >  6:318119/1‑122 (MQ=255)                                 gCTGGAAACCCTGCATAACGCCCTGACCGGCCGCTACCGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAgcag                                                                                                               >  8:45606‑M2/1‑144 (MQ=255)                                  cTGGAAACCCTGCATAACGCCCTGACCGGCCGCTACCGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAgcaggc                                                                                                             <  7:205288‑M2/149‑7 (MQ=255)                                   tGGAAACCCTGCATAACGCCCTGACCGGCCGCTACCGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAgcaggc                                                                                                             <  2:403428‑M2/148‑7 (MQ=255)                                   tGGAAACCCTGCATAACGCCCTGACCGGCCGCTACCGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAgcaggc                                                                                                             <  5:256549‑M2/148‑7 (MQ=255)                                    ggAAACCCTGCATAACGCCCTGACCGGCCGCTACCGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCtgcagcgggccactgatgccgctgtccagtggcaggctc                                                                                                           <  8:178283‑M1/149‑40 (MQ=255)                                     gAAACCCTGCATAACGCCCTGACCGGCCGCTACCGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTAt                                                                                                          <  5:108993/149‑1 (MQ=255)                                      aaaCCCTGCATAACGCCCTGACCGGCCGCTACCGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCtgcagcgggccactgatgccgctgtccagtggcaggctctt                                                                                                         <  8:314853‑M1/149‑42 (MQ=255)                                          ccTGCATAACGCCCTGACCGGCCGCTACCGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGa                                                                                                      >  3:381067/1‑148 (MQ=255)                                          ccTGCATAACGCCCTGACCGGCCGCTACCGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGAc                                                                                                     <  6:307741/149‑1 (MQ=255)                                           cTGCATAACGCCCTGACCGGCCGCTACCGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCtgcagcgggccactgatgccgctgtccagtggcaggctcttc                                                                                                        <  6:31134‑M1/145‑43 (MQ=255)                                           cTGCATAACGCCCTGACCGGCCGCTACCGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCtgcagcgggccactgatgccgctgtccagtggcaggctcttc                                                                                                        >  5:31134‑M1/1‑103 (MQ=255)                                                    gCCCTGACCTGCCGCTACCGCCTGCTTCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGCTCCTGCCACTGGACAGCGGCATCATTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGa                                                                                           <  6:265869/149‑1 (MQ=255)                                                    gCCCTGACCGGCCGCTACCGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTg                                                                                             >  6:277738/1‑147 (MQ=255)                                                        tgcccGGCCGCTACCGCCTGCTGCGTATGAACCCACGCGCCCGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACACCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCt                                                                                       >  3:91199/4‑149 (MQ=255)                                                         gACCGGCCGCTACCGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTg                                                                                      >  6:417265/1‑149 (MQ=255)                                                           ccGGCCGCTACCGCCCGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGc                                                                                    <  2:129029/149‑1 (MQ=255)                                                            cGGCCGCTACCGCCTGCTGCGTATGAACCAACGCGCCGGAGGGTCACGCCCGCCTCTCATGCTGCGCCTTTATGTGAAGATCCTGCCACTGGACAGCGGCATAAGTGTCCCGCTGCATCAGTCTATCCGACAGACCCTGGAGGCTgg                                                                                     <  5:93444/147‑1 (MQ=255)                                                            cGGCCGCTACCGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGcc                                                                                   <  6:120391/149‑1 (MQ=255)                                                            cGGCCGCTACCGCCTGCTGAGTATGAACCAACGCGCCGGAGGGGCACGCCAGCCGAGAATGATGCGCATTGATTTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCTCTGCAGCAGGCTATCCGACAGACACTGGAGGCTgg                                                                                     >  6:93444/1‑147 (MQ=255)                                                              gCCGCTACCGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCcaa                                                                                 <  1:403428/149‑1 (MQ=255)                                                               ccGCTACCGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCcaac                                                                                <  5:417265/149‑1 (MQ=255)                                                               ccGCTACCGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCcaac                                                                                <  2:19595/149‑1 (MQ=255)                                                                   tagcGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCCAACAAGt                                                                            <  2:349494/146‑1 (MQ=255)                                                                   tACCGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCCAACAAGt                                                                            >  3:99349/1‑149 (MQ=255)                                                                     ccGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTg                                                                                                                     >  7:247431/1‑106 (MQ=255)                                                                     ccGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTg                                                                                                                     <  8:247431/106‑1 (MQ=255)                                                                     ccGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCCAACAAGTGc                                                                          <  7:197009/149‑1 (MQ=255)                                                                     ccGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCCAACAAGTGc                                                                          >  7:140480/1‑149 (MQ=255)                                                                      cGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAgcagg                                                                                                              >  1:369249‑M2/1‑107 (MQ=255)                                                                      cGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAgcagg                                                                                                              <  2:369249‑M2/112‑6 (MQ=255)                                                                      cGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCCAACAAGTGCt                                                                         >  5:107614/1‑149 (MQ=255)                                                                         ctgctgCGTATGAACCAACGCGCCGGAGTGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCCAACAAGTGCTGgt                                                                      <  5:240805/149‑1 (MQ=255)                                                                              gcGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCCAACAAGTGCTGGTGTTcc                                                                 >  3:176898/1‑149 (MQ=255)                                                                               cGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCCAACAAGTGCTGGTGTTc                                                                  <  6:107614/147‑1 (MQ=255)                                                                                gTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCCAACAAGTGCTGGTGTTCCt                                                                >  4:117939/1‑148 (MQ=255)                                                                                  aTGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCcaacaa                                                                              <  3:400074/132‑1 (MQ=255)                                                                                  aTGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCcaacaa                                                                              >  4:400074/1‑132 (MQ=255)                                                                                        cAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCCAACAAGTGCTGGTGTTCCTCAAccgccg                                                       >  2:256155/1‑149 (MQ=255)                                                                                           cgcgCCGGAGGGGCATGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACt                                                                                                                                              >  4:63467/1‑59 (MQ=255)                                                                                           cgcgCCGGAGGGGCATGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACt                                                                                                                                              <  3:63467/59‑1 (MQ=255)                                                                                           cgcgCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATGCGACAGACCCTGGAGGCTGGCCAACAAGTGCTGGTGTTc                                                                  >  1:331426/1‑135 (MQ=255)                                                                                           cgcgCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCCAACAAGTGCTGGTGTTc                                                                  <  2:331426/135‑1 (MQ=255)                                                                                           cgcgCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCCAACAAGTGCTGGTGTTCCTCAACCGCCGCgg                                                    >  6:26238/1‑149 (MQ=255)                                                                                                cGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCCAACAAGTGCTGGTGTTCCTCAACCGCCGCGGCTTTg                                               >  4:125322/1‑149 (MQ=255)                                                                                                 ggAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCCAACAAGTGCTGGTGTTCCTCAACCGCCGCGGCTTTGc                                              <  1:184676/149‑1 (MQ=255)                                                                                                 ggAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCCAACAAGTGCTGGTGTTCCTCAACCGCCGCGGCTTTGc                                              <  6:256549/149‑1 (MQ=255)                                                                                                 ggAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCCAACAAGTGCTGGTGTTCCTCAACCGCCGCGGCTTTGc                                              <  8:205288/149‑1 (MQ=255)                                                                                                 ggAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCCAACAAGTGCTGGTGTTCCTCAACCGCCGCGGCTTTGc                                              <  4:381067/149‑1 (MQ=255)                                                                                                  gAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCCAACAAGTGCt                                                                         >  3:271035/1‑121 (MQ=255)                                                                                                  gAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCCAACAAGTGCt                                                                         <  4:271035/121‑1 (MQ=255)                                                                                                       gCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCCAACAAGTGCTGGTGTTCCTCAACCGCCGCGGCTTTGCCCCAAc                                        >  3:386618/1‑149 (MQ=255)                                                                                                           gcccgccGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCCAACAAGTGCTGGTGTTCCTCAACCGCCGCGGCTTTGCCCCAACCTTg                                    <  4:386618/149‑1 (MQ=255)                                                                                                              cgccgcGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCCAACAAGTGCTGGTGTTCCTCAACCGCCGCGGCTTTGCCCCAACCTTGCtg                                 >  5:131400/1‑149 (MQ=255)                                                                                                               gccgcGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCCAACAAGTGCTGGTGTTCCTCAACCGCCGCGGCTTTGCCCCAACCTTGCtgt                                <  6:131400/149‑1 (MQ=255)                                                                                                                 cgcgCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCCAACAAGTGCTGGTGTTCCTCAACCGCCGCGGCTTTGCCCCAACCTTGCTGTGc                              <  5:26238/149‑1 (MQ=255)                                                                                                                   cgcATGCGGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCCAACAAGTGCTGGTGTTCCTCAACCGCCGCGGCTTTGCCCCAACCTTGCTGTGCCa                            <  2:122093/149‑1 (MQ=255)                                                                                                                    gcATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCCAACAAGTGCTGGTGTTCCTCAACCGCCGCGGCTTTGCCCCAACCTTGCTGTGCCAc                           <  4:99349/149‑1 (MQ=255)                                                                                                                         ctgcGCCTTGATGTGAAGCGCCTGCCCCTGGACAGCGGTATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTCGAGGCTGGCCAACAAGTGCTGGTGTTCCTCAACCGCCGCGGCTTTGCCCCAACCTTGCTGTGCCACGATTg                      <  6:28914/149‑1 (MQ=255)                                                                                                                         ctgcGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCCAACAAGTGCTGGTGTTCCTCAACCGCCGCGGCTTTGCCCCAACCTTGCTGTGCCACGAtt                       <  5:277738/148‑1 (MQ=255)                                                                                                                          tgcGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCCAACAAGTGCTGGTGTTCCTCAACCGCCGCGGCTTTGCCCCAGCCTTGCTGTGCCACGATTGc                     >  8:266025/1‑149 (MQ=255)                                                                                                                            cgcCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCCAACAAGTGCTGGTGTTCCTCAACCGCCGCGGCTTTGCCCCAACCTTGCTGTGCCACGATTGCgg                   <  8:140480/149‑1 (MQ=255)                                                                                                                            cgcCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCCAACAAGTGCTGGTGTTCCTCAACCGCCGCGGCTTTGCCCCAACCTTGCTGTGCCACGATTGCgg                   <  8:159907/149‑1 (MQ=255)                                                                                                                              ccTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGAc                                                                                                     >  7:327522/1‑65 (MQ=255)                                                                                                                              ccTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGAc                                                                                                     <  8:327522/65‑1 (MQ=255)                                                                                                                                  gATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCCAACAAGTGCTGGTGTTCCTCAACCGCCGCGGCTTTGCCCCAACCTTGCTGTGCCACGATTGCggctgg               <  1:256155/147‑1 (MQ=255)                                                                                                                                   aTGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCCAACAAGTGCTGGTGTTCCTCAACCGCCGCGGCTTTGCCCCAACCTTGCTGTGCCACGATTGCGgctggctg            >  6:25679/1‑149 (MQ=255)                                                                                                                                      tgAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCCAACAAGTGCTGGTGTTCCTCAACCGCCGCGGCTTTGCCCCAACCTTGCTGTGCCACGATTGCGGCTGGCTGTcc         <  5:25679/149‑1 (MQ=255)                                                                                                                                       gAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAgcaggctcttcacatcaaggcgcagcatgcgcggcgggcgtgcccctccggcgcgttggttcatacgcagcaggcggtagcggccggtcagggcgttatgcag            >  5:31134‑M2/1‑42 (MQ=255)                                                                                                                                       gAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAgcaggctcttcacatcaaggcgcagcatgcgcggcgggcgtgcccctccggcgcgttggttcatacgcagcaggcggtagcggccggtcagggcgttatgcag            <  6:31134‑M2/145‑104 (MQ=255)                                                                                                                                        aaGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAgcaggctcttcacatcaaggcgcagcatgcgcggcgggcgtgcccctccggcgcgttggttcatacgcagcaggcggtagcggccggtcagggcgttatgcagggttt       <  8:314853‑M2/149‑109 (MQ=255)                                                                                                                                          gagCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAgcaggctcttcacatcaaggcgcagcatgcgcggcgggcgtgcccctccggcgcgttggttcatacgcagcaggcggtagcggccggtcagggcgttatgcagggtttcc     <  8:178283‑M2/149‑111 (MQ=255)                                                                                                                                            gCCTGCtgcagcgggccactgatgccgctgtccagtggcaggctcttcacatcaaggcgcagcatgcgcggcgggcgtgcccctccggcgcgttggttcatacgcagcaggcggtagcggccggtcagggcgttatgcagggtttccag   <  7:205288‑M1/149‑144 (MQ=255)                                                                                                                                            gCCTGCtgcagcgggccactgatgccgctgtccagtggcaggctcttcacatcaaggcgcagcatgcgcggcgggcgtgcccctccggcgcgttggttcatacgcagcaggcggtagcggccggtcagggcgttatgcagggtttcca    <  5:256549‑M1/148‑143 (MQ=255)                                                                                                                                            gCCTGCtgcagcgggccactgatgccgctgtccagtggcaggctcttcacatcaaggcgcagcatgcgcggcgggcgtgcccctccggcgcgttggttcatacgcagcaggcggtagcggccggtcagggcgttatgcagggtttcca    <  2:403428‑M1/148‑143 (MQ=255)                                                                                                                                             ccTGCtgcagcgggccactgatgccgctgtccagtggcaggctcttcacatcaaggcgcagcatgcgcggcgggcgtgcccctccggcgcgttggttcatacgcagcaggcg                                       <  2:369249‑M1/112‑108 (MQ=255)                                                                                                                                             ccTGCtgcagcgggccactgatgccgctgtccagtggcaggctcttcacatcaaggcgcagcatgcgcggcgggcgtgcccctccggcgcgttggttcatacgcagcaggcg                                       >  1:369249‑M1/1‑5 (MQ=255)                                                                                                                                              ctgctgcagcgggccactgatgccgctgtccagtggcaggctcttcacatcaaggcgcagcatgcgcggcgggcgtgcccctccggcgcgttggttcatacgcagcaggcggtagcggccggtcagggcgttatgcagggtttccagc  >  8:45606‑M1/1‑4 (MQ=255)                                                                                                                                                 |                                                                                                                                                 ATCCCGATCCTGCTCGGTTCCGCCACACCGTCGCTGGAAACCCTGCATAACGCCCTGACCGGCCGCTACCGCCTGCTGCGTATGAACCAACGCGCCGGAGGGGCACGCCCGCCGCGCATGCTGCGCCTTGATGTGAAGAGCCTGCCACTGGACAGCGGCATCAGTGGCCCGCTGCAGCAGGCTATCCGACAGACCCTGGAGGCTGGCCAACAAGTGCTGGTGTTCCTCAACCGCCGCGGCTTTGCCCCAACCTTGCTGTGCCACGATTGCGGCTGGCTGTCCGAATGCC  >  NC_002947/5811732‑5812020

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.