New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 604002994 (1.440)6 (0.100) 5/250 NT 6.2% coding (34/780 nt) PP_5292 catabolite repression control protein
?NC_002947 = 6040072 92 (1.490)coding (77/780 nt) PP_5292 catabolite repression control protein

Only 100 of 125 total aligned reads displayed.

AAAACGGATAAAGTCGCGCTGATACGGCTGCATGAATAGTCCCGGACACCACGGATTTAGCTAAATGGGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCCTTTGAACTCGACGACCCAGCTTTCCAGCTCGATGGCTATTTCCTTTATGCCTGCGACGCG  >  NC_002947/6039883‑6040175
                                                                                                                                                  |                                                                                                                                                  
 aaaCGGATAAAGTCGCGCTGATACGGCTGCATGAATAGTCCCGGACACCACGGATTTAGCTAAATGGGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAgg                                                                                                                                                 >  6:368987/1‑149 (MQ=255)
  aaaggATAAACTCGCCCTCATACGGCTGCATGAATAGTCCCGGACACCACCCATTAAGCTAAATGGGTTGAGCTCGGGTATCATCCACGAACTAGAATTATGGCGCCAATAAAGCGGATCATCAGTCTGAGCGTAAATCCCATTCAgc                                                                                                                                                 >  4:55439/4‑147 (MQ=255)
     ggATAAAGTCGCGCTGATACGGCTGCATGAATAGTCCCGGACACCACGGATTTAGCTAAATGGGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGc                                                                                                                                             <  5:368987/149‑1 (MQ=255)
           aGTCGCGCTGATACGGCTGCATGAATAGTCCCGGACACCACGGATTTAGCTAAATGGGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGcc                                                                                                                                         >  5:294975/1‑147 (MQ=255)
               gcgcTGATACGGCTGCGTGAATAGTCCCGGACACCACGGATTTAGCTAAATGGGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGt                                                                                                                                   >  2:92374/1‑149 (MQ=255)
               gcgcTGATACGGCTGCATGAATAGTCCCGGACACCACGGATTTAGCTAAATGGGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGt                                                                                                                                   >  6:134197/1‑149 (MQ=255)
                     aTACGGCTGCATGAATAGTCCCGGACACCACGGATTTAGCTAAATGGGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTg                                                                                                                             <  3:167424/149‑1 (MQ=255)
                         ggCTGCATGAATAGTCCCGGACACCACGGATTTAGCTAAATGGGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGc                                                                                                                                     <  4:126921/137‑1 (MQ=255)
                         ggCTGCATGAATAGTCCCGGACACCACGGATTTAGCTAAATGGGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGc                                                                                                                                     >  3:126921/1‑137 (MQ=255)
                           cTGCATGAATAGTCCCGGACACCACGGATTTAGCTAAATGGGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCtgggcttgcagccagctgagcaaaccacg                                                                                                                       >  4:176416‑M1/1‑120 (MQ=255)
                           cTGCATGAATAGTCCCGGACACCACGGATTTAGCTAAATGGCTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTg                                                                                                                                  <  1:30797/138‑1 (MQ=255)
                           cTGCATGAATAGTCCCGGACACCACGGATTTAGCTAAATGGATTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTg                                                                                                                                  >  2:30797/1‑138 (MQ=255)
                              cATGAATAGTCCCGGACACCACGGATTTAGCTAAATGGGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGt                                                                                                                                <  8:132748/137‑1 (MQ=255)
                               aTGAATAGTGCCGCACACCACGGATTTAGCTATATGGGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAgctggc                                                                                                                   <  4:135481/149‑1 (MQ=255)
                               aTGAATAGTCCCGGACACCACGGATTTAGCTAAATGGGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAgctggc                                                                                                                   >  6:43948/1‑149 (MQ=255)
                                tGAATAGTCCCGGACACCACGGATTTAGCTAAATGGGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAgctggct                                                                                                                  >  3:227310/1‑149 (MQ=255)
                                tGAATAGTCCCGGACACCACGGATTTAGCTAAATGAGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAgctggct                                                                                                                  >  1:61427/1‑149 (MQ=255)
                                 gAATAGTCCCGGACACCACGGATTTAGCTAAATGGGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAgctggctg                                                                                                                 >  3:358507/1‑149 (MQ=255)
                                 gAATAGTCCCGGACACCACGGATTTAGCTAAATGGGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAgctggctg                                                                                                                 >  2:131705/1‑149 (MQ=255)
                                       tCCCGGACACCACGGATTTAGCTAAATGGGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGtt                                                                                                                               >  7:91912/1‑129 (MQ=255)
                                         ccGGACACCACGGATTTAGCTAAATGGGTTGAGCTCGGGAATCATACACGCACGAGATTTATGGGGCCATTTATGCGGAGCATCAGTGTGAACGTAAATGGCATTCtgggcttgcagccagctgagcaaaccacgctcggccgcagcct                                                                                                         <  7:378234‑M1/149‑44 (MQ=255)
                                            gACACCACGGATTTAGCTAAATGGGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAgaa                                                                                                      >  5:43948‑M2/1‑146 (MQ=255)
                                               accacGGATTTAGCTAAATGGGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCtgggcttgcagccagctgagcaaaccacgctcggccgcagcctgaatgc                                                                                                   >  2:390918‑M1/1‑100 (MQ=255)
                                               accacGGATTTAGCTAAATGGGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAgaatgc                                                                                                   >  1:92374‑M2/1‑143 (MQ=255)
                                               accacGGATTTAGCTAAATGGGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAgaatgc                                                                                                   <  5:225632‑M2/149‑7 (MQ=255)
                                                 cacGGATTTAGCTAAATGGGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCg                                                                                                 >  8:343791/1‑149 (MQ=255)
                                                 cacGGATTTAGCTAAATGGGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCACTGTGAACGAAAATGTCAATCAGACTGCGGCCGCGCGTCGTTTGCTCAGCTCGCTGCAAGCCCAgaatgcc                                                                                                  <  4:35818‑M2/148‑8 (MQ=255)
                                                  acGGATTTAGCTAAATGGGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTc                                                                                                                          >  2:280524/1‑123 (MQ=255)
                                                  acGGATTTAGCTAAATGGGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTc                                                                                                                          <  1:280524/123‑1 (MQ=255)
                                                  acGGAGTTAGCTAAATGGGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGa                                                                                                <  4:300196/149‑1 (MQ=255)
                                                   cGGATTTAGCTAAATGGGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCtgggcttgcagccagctgagcaaaccacgctcggccgcagcctgaatgccatt                                                                                               <  1:390918‑M1/149‑54 (MQ=255)
                                                   cGGATTTAGCTAAATGGGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGAc                                                                                               <  6:225632/149‑1 (MQ=255)
                                                          aGCTAAATGGGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAgctggctg                                                                                                                 <  1:351782/124‑1 (MQ=255)
                                                          aGCTAAATGGGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCt                                                                                        >  8:288786/1‑149 (MQ=255)
                                                           gCTAAATGGGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAgaatgcc                                                                                                  <  1:165803‑M2/138‑8 (MQ=255)
                                                           gCTAAATGGGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAgaatgcc                                                                                                  >  2:165803‑M2/1‑131 (MQ=255)
                                                           gCTAAATGGGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCt                                                                                        <  1:131705/148‑1 (MQ=255)
                                                             tAAATGGGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGcc                                                                                     >  6:400216/1‑149 (MQ=255)
                                                              aaaTGGGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCt                                                                                    >  7:144890/1‑149 (MQ=255)
                                                              aaaTGGGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCt                                                                                    >  5:312948/1‑149 (MQ=255)
                                                                 tGGGTGGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCa                                                                                 <  2:118067/149‑1 (MQ=255)
                                                                   ggTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAg                                                                                <  3:55439/148‑1 (MQ=255)
                                                                    gTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGa                                                                              >  8:267622/1‑149 (MQ=255)
                                                                     ttGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGAt                                                                             <  6:312948/149‑1 (MQ=255)
                                                                          cTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCcg                                                                        >  5:39241/1‑149 (MQ=255)
                                                                           tCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGAGCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGCATGCCGACGTCATCTGCCTTCAGGATACCcgc                                                                       >  7:100859/1‑149 (MQ=255)
                                                                                  tCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAAGATACCCGCGCCTCgg                                                                <  3:352203/149‑1 (MQ=255)
                                                                                    aTACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGcc                                                              >  3:43746/1‑149 (MQ=255)
                                                                                       cacgcactAGATTTATGGGGCCATTTATGGGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGTTCGTGGTTTGCTCAGCTGTCTGCAAGCCCAGAATGCCTACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCCttt                                                           <  1:54780/149‑1 (MQ=255)
                                                                                       cacgcacgATATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCCttt                                                           <  4:65689/149‑1 (MQ=255)
                                                                                       cacgcacgAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCCttt                                                           <  2:39499/149‑1 (MQ=255)
                                                                                       cacgcacgAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCCttt                                                           <  7:343791/149‑1 (MQ=255)
                                                                                       cacgcacgAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCCttt                                                           <  2:147036/149‑1 (MQ=255)
                                                                                        acgcacgAGATTTATGGGGCCATTTATGCTTATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCCttt                                                           >  5:354885/1‑148 (MQ=255)
                                                                                        acgcacgAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCCttt                                                           >  1:36345/1‑148 (MQ=255)
                                                                                          gcacgAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCCTTTGaa                                                        >  4:163178/1‑149 (MQ=255)
                                                                                          gcacgAGATTTATGGGGACATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTAAGGATACCCGCGCCTCGGCCTTTGaa                                                        >  3:373584/1‑149 (MQ=255)
                                                                                             cgAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCCTTTGAACTc                                                     <  2:36345/149‑1 (MQ=255)
                                                                                               agaTTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCCTTTGAACTcga                                                   <  1:197113/149‑1 (MQ=255)
                                                                                               agaTTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCCTTTGAACTcga                                                   >  6:53567/1‑149 (MQ=255)
                                                                                                          gCCATTTATGCGGATCCTCAGTGTGCACGTAAATGGCCTTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGACTGCCGACGTCATCTGCCTTCATGATACCCGCGCCTCGGCCTTTGAACTCGACGACCCAGCtt                                        <  4:79649/149‑1 (MQ=255)
                                                                                                          gCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGGTACCCGCGCCTCg                                                                 >  3:63032/1‑124 (MQ=255)
                                                                                                          gCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGGTACCCGCGCCTCg                                                                 <  4:63032/124‑1 (MQ=255)
                                                                                                          gCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCCTTTGAACTCGACGACCCAGCtt                                        >  5:301423/1‑149 (MQ=255)
                                                                                                            cATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCCTTTGAACTCGACGACCCAGCTTTc                                      <  2:273926/149‑1 (MQ=255)
                                                                                                             aTTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCCTTTGAACTCGACGACCCAGCTTTcc                                     <  4:358507/149‑1 (MQ=255)
                                                                                                              tttATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCCTTTGAACTCGACGACCCAGCTTTCCa                                    <  4:227310/149‑1 (MQ=255)
                                                                                                                 aTGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCACGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCGTTTGATCTCGACGCCCCAGCTGTCCAGcg                                 >  2:321933/1‑148 (MQ=255)
                                                                                                                 aTGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCCTTTGAACTCGACGACCCAGCTTTCCAGCt                                 >  3:243585/1‑149 (MQ=255)
                                                                                                                     ggATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCCTTTGAACTCGACGACCCAGCTTTCCAGCTCGAt                             <  6:39241/149‑1 (MQ=255)
                                                                                                                     ggATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCCTTTGAACTCGACGACCCAGCTTTCCAGCTCGAt                             <  5:53567/149‑1 (MQ=255)
                                                                                                                          atcaGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCCTTTGAACTCGACGACCCAGCTTTCCAGCTCGATGGCTa                        >  1:83155/1‑149 (MQ=255)
                                                                                                                          atcaGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCCTTTGAACTCGACGACCCAGCTTTCCAGCTCGATGGCTa                        >  8:13062/1‑149 (MQ=255)
                                                                                                                           tcaGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCCTTTGAACTCGACGACCCAGCTTTCCAGCTCGATGGCTAt                       >  7:340951/1‑149 (MQ=255)
                                                                                                                              gtgtGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCCTTTGAACTCGACGACCCAGCTTTCCAGCTCGATGGCTATTTc                    <  4:279571/149‑1 (MQ=255)
                                                                                                                                gtgAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCCTTTGAACTCGACGACCCAGCTTTCCAGCTCGATGGCTATTTCCt                  >  7:135195/1‑149 (MQ=255)
                                                                                                                                 tgAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCCTTTGAACTCGACGACCCAGCTTTCCAGCTCGATGGCTATTTCCtt                 <  7:288786/149‑1 (MQ=255)
                                                                                                                                 tgAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCCTTTGAACTCGACGACCCAGCTTTCCAGCTCGATGGCTATTTCCt                  <  7:13062/148‑1 (MQ=255)
                                                                                                                                  gAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCCTTTGAACTCGACGACCCAGCTTTCCAGCTCGATGGc                          <  8:140642/139‑1 (MQ=255)
                                                                                                                                  gAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCCTTTGAACTCGACGACCCAGCTTTCCAGCTCGATGGc                          >  7:140642/1‑139 (MQ=255)
                                                                                                                                   aaCGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCGGCCTTCAGGATACCCGCGCCTCGGCCTTTGAACTCGACGACCCAGCTGTCCAGCTCGATGGCTATTTCCTTTa               >  3:266990/1‑149 (MQ=255)
                                                                                                                                    aCGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGATGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCCTTTGAACTCGACGACCCAGCTTTCCAGCTCGATGGCTATTTCCTTTAt              >  3:316977/1‑149 (MQ=255)
                                                                                                                                       tgaatgGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAgaatgccatttacgttcacactgatgatccgcataaatggccccataaatctcgtgcgtgtatgatacccgagctcaacccatttagctaaatc           <  3:176416‑M2/147‑95 (MQ=255)
                                                                                                                                         aaTGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAgaatgccatttacgttcacactgatgatccgcataaatggccccataaatctcgtgcgtgtatgatacccgagctcaacccatttagctaaatccg         <  1:390918‑M2/149‑97 (MQ=255)
                                                                                                                                         aaTGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCCTTTGAACTCGACGACCCAGCTTTCCAGCTCGATGGCTATTTCCTTTATGCCTg         >  1:71051/1‑149 (MQ=255)
                                                                                                                                         aaTGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAACCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCCTTTGAACTCGACGACCCAGCTTTCCAGCTCGATGGCTATTTCCTTTATGCCTg         >  1:299804/1‑149 (MQ=255)
                                                                                                                                           tGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAgaatgccatttacgttcacactgatgatccgcataaatggccccataaatctcgtgcgtgtatgatacccgagctcaacccatttagctaaatccgtg       <  3:39464‑M2/149‑99 (MQ=255)
                                                                                                                                            ggCATTCtgggcttgcagcgagctgagcaaacgacgcgcggccgcagtctgattgacattttcgttcacagtgatgatccgcataaatggccccataaatctcgtgcgtgtatgatacccgagctcaacccatttagctaaatccgtg       <  4:35818‑M1/148‑142 (MQ=255)
                                                                                                                                            ggCATTCtgggcttgcagccagctgagcaaaccacgctcggccgcagcctgaatgccatttacgttcacactgatgatccgcataaatggccccataaatctcgtgcgtgtatgatacccgagctcaacccatttagctaaatccgtg       <  1:342551‑M1/148‑142 (MQ=255)
                                                                                                                                            ggCATTCtgggcttgcagccagctgagcaaaccacgctcggccgcagcctgaatgccatttacgttcacactgatgatccgcataaatggccccataaatctcgtgcgtgtatgatacccgagctcaacccatttagc                 >  2:165803‑M1/1‑7 (MQ=255)
                                                                                                                                            ggCATTCtgggcttgcagccagctgagcaaaccacgctcggccgcagcctgaatgccatttacgttcacactgatgatccgcataaatggccccataaatctcgtgcgtgtatgatacccgagctcaacccatttagc                 <  1:165803‑M1/138‑132 (MQ=255)
                                                                                                                                             gCATTCtgggcttgcagccagctgagcaaaccacgctcggccgcagcctgaatgccatttacgttcacactgatgatccgcataaatggccccataaatctcgtgcgtgtatgatacccgagctcaacccatttagctaaatccgtggt     <  5:225632‑M1/149‑144 (MQ=255)
                                                                                                                                             gCATTCtgggcttgcagccagctgagcaaaccacgctcggccgcagcctgaatgccatttacgttcacactgatgatccgcataaatggccccataaatctcgtgcgtgtatgatacccgagctcaacccatttagctaaatccgtggt     >  1:92374‑M1/1‑6 (MQ=255)
                                                                                                                                             gCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAgaatgccatttacgttcacactgatgatccgcataaatggccccataaatctcgtgcgtgtatgatacccgagctcaacccatttagctaaatccgtggt     >  2:390918‑M2/1‑49 (MQ=255)
                                                                                                                                             gCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCCTTTGAACTCGACGACCCAGCTTTCCAGCTCGATGGCTATTTCCTTTATGCCTGCGAc     >  4:250973/1‑149 (MQ=255)
                                                                                                                                               aTTCAGGCTGCGGACGAGCGTTGTTTGGTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCCTTTGAACTCGACGACCCAGCTTTCCAGCTCGATGGCTATTTCCTTTATGCCTGCGAcgc   <  4:43746/149‑1 (MQ=255)
                                                                                                                                                ttCtgggcttgcagccagctgagcaaaccacgctcggccgcagcctgaatgccatttacgttcacactgatgatccgcataaatggccccataaatctcgtgcgtgtatgatacccgagctcaacccatttagctaaatccgtggtgtc  >  5:43948‑M1/1‑3 (MQ=255)
                                                                                                                                                ttCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCCTTTGAACTCGACGACCCAGCTTTCCAGCTCGATGGCTATTTCCTTTATGCCTGCGAcgcg  <  8:340951/149‑1 (MQ=255)
                                                                                                                                                 tCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCCTTTGAACTCGACGACCCAGCTTTCCAGCt                                 >  1:9237/1‑117 (MQ=255)
                                                                                                                                                 tCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCCTTTGAACTCGACGACCCAGCTTTCCAGCt                                 <  2:9237/117‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                  
AAAACGGATAAAGTCGCGCTGATACGGCTGCATGAATAGTCCCGGACACCACGGATTTAGCTAAATGGGTTGAGCTCGGGTATCATACACGCACGAGATTTATGGGGCCATTTATGCGGATCATCAGTGTGAACGTAAATGGCATTCAGGCTGCGGCCGAGCGTGGTTTGCTCAGCTGGCTGCAAGCCCAGAATGCCGACGTCATCTGCCTTCAGGATACCCGCGCCTCGGCCTTTGAACTCGACGACCCAGCTTTCCAGCTCGATGGCTATTTCCTTTATGCCTGCGACGCG  >  NC_002947/6039883‑6040175

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.