| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 6066931 | 62 (0.950) | 3 (0.050) | 3/246 | NT | 4.5% | coding (1055/1308 nt) | phoR | two‑component system sensor histidine kinase |
| ? | NC_002947 | = 6066963 | 69 (1.140) | coding (1087/1308 nt) | phoR | two‑component system sensor histidine kinase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 103 total aligned reads displayed.
AGCGCATCAACCTGGAAGCGGCGCCTGGCGTCAAGCTGAAGGGCAGCGAGTCGGAATTGCGCAGTGCCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTG > NC_002947/6066784‑6067079 | cccccATCAACCTGGAACGGGGGGCTGGCGGAAACCTTAAGGGCAGGCTTGCGGAATTGCCCAGGGCCTTTTCCAATCCCTGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCa < 1:329706/145‑1 (MQ=255) gcATCAACCTGGAAGCGGCGCCTGGCGTCAAGCTGAAGGGCAGCGAGTCGGAATTGCGCAGTGCCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGgc > 1:206932/1‑149 (MQ=255) cATCAACCTGGAAGCGGCGCCTGGCGTCAAGCTGAAGGGCAGCGAGTCGGAATTGCGCAGTGCCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGTAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGgcg > 7:91932/1‑149 (MQ=255) cATCAACCTGGAAGCGGCGCCTGGCGTCAAGCTGAAGGGCAGCGAGTCGGAATTGCGCAGTGCCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGgcg > 8:333685/1‑149 (MQ=255) aTCAACCTGGAAGCGGCGCCTGGCGTCAAGCTGAAGGGCAGCGAGTCGGAATTGCGCAGTGCCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAACGGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAg < 1:271569/145‑1 (MQ=255) aTCAACCTGGAAGCGGCGCCTGGCGTCAAGCTGAAGGGCAGCGAGTCGGAATTGCGCAGTGCCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAg > 2:271569/1‑144 (MQ=255) cAACCTGGAAGCGGCGCCTGGCGTCAAGCTGAAGGGCAGCGAGTCGGAATTGCGCAGTGCCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGca > 8:20966/1‑148 (MQ=255) gAAGCGGCGCCTGGCGTCAAGCTGAAGGGCAGCGAGTCGGAATTGCGCAGTGCCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGt < 8:111198/148‑1 (MQ=255) gcgcCTGGCGTCAAGCTGAAGGGCAGCGAGTCGGAATTGCGCAGTGCCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTg > 8:377524/1‑147 (MQ=255) gcgcCTGGCGTCAAGCTGAAGGGCAGCGAGTCGGAATTGCGCAGTGCCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTg < 7:377524/147‑1 (MQ=255) gcgcCTGGCGTCAAGCTGAAGGGCAGCGAGTCGGAATTGCGCAGTGCCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCa < 3:105091/149‑1 (MQ=255) cgcCTGGCGTCAAGGTGAAGGGCAGCGAGTCGGAATTTCGCAGTGGCTTTTCCATT‑CTGGTGTTCAATGGAGTCAAGTAGA‑CGCTGGTCGAA‑GGCAGCATCCGCATCCGCTGGTGGGCGGATGCCCAGGGCGCACACCTGTCGGTGCAg < 7:4061/149‑1 (MQ=255) gTCAAGCTGAAGGGCAGCGAGTCGGAATTGCGCAGTGCCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAcccccgagtcctgcaccgacaggtgtgcgc > 4:107791‑M1/1‑119 (MQ=255) cAAGCTGAAGGGCAGCGAGTCGGAATTGCGCAGTGCCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCggggg > 5:86169/1‑149 (MQ=255) gCTGAAGGGCAGCGAGTCGGAATTGCGCAGTGCCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGtgg > 1:388077‑M2/1‑146 (MQ=255) gCTGAAGGGCAGCGAGTCGGAATTGCGCAGTGCCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGtgg > 5:212905‑M2/1‑146 (MQ=255) cTGAAGGGCAGCGAGTCGGAATTGCGCAGTGCCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGtggg > 6:155196‑M2/1‑145 (MQ=255) tGAAGGGCAGCGAGTCGGAATTGCGCAGTGCCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGtggg < 8:254098‑M2/148‑5 (MQ=255) tGAAGGGCAGCGAGTCGGAATTGCGCAGTGCCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGtggg < 1:298055‑M2/148‑5 (MQ=255) tGAAGGGCAGCGAGTCGGAATTGCGCAGTGCCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GCCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCGGTCGGTGCAGGACACGGGGGtggg < 8:254100‑M2/148‑5 (MQ=255) gAAGGGCAGCGAGTCGGAATTGCGCAGTGCCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGtgggca < 6:367‑M2/149‑7 (MQ=255) aaGGGCAGCGAGTCGGAATTGCGCAGTGCCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGc > 4:1847/1‑130 (MQ=255) aaGGGCAGCGAGTCGGAATTGCGCAGTGCCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGc < 3:1847/130‑1 (MQ=255) aGGGCAGCGAGTCGGAATTGCGCAGTGCCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAcccccgagtcctgcaccgacaggtgtgcgccctgggcatc < 2:46142‑M1/149‑41 (MQ=255) gggCAGCGAGTCGGAATTGCGCAGTGCCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAcccccgagtcctgcaccgacaggtgtgcgccctgggcatcg < 3:107791‑M1/149‑42 (MQ=255) gggCAGCGAGTCGGAATTGCGCAGTGCCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGtgggcatc < 4:287253‑M2/148‑9 (MQ=255) ggCAGCGAGTCGGAATTGCGCAGTGCCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGa > 6:374894/1‑149 (MQ=255) ggCAGCGAGTCGGAATTGCGCAGTGCCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGa < 3:318303/149‑1 (MQ=255) cAGCGAGTCGGAATTGCGCAGTGCCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATg > 5:173947/1‑149 (MQ=255) gCGAGTCGGAATTGCGCAGTGCCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCCGTCGGTGCAGGACTCGGGGGTGGGCATCGATGcc < 3:185285/149‑1 (MQ=255) aGTCGGAATTGCGCAGTGCCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAg < 7:333685/149‑1 (MQ=255) tCGGAATTGCGCAGTACCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCa > 6:193645/1‑149 (MQ=255) ggAATTGCGCAGTGCCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACAGCCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCAt > 1:99650/1‑149 (MQ=255) gAATTGCGCCGTGCCTTTTCCAAT‑CTGGTGTTCATTGCATTCAAGTACA‑CCCAGGACGAA‑GGCAGAATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCAttt < 1:317056/149‑1 (MQ=255) gAATTGCGCAGTGCCTTTTCCTTT‑CTGGTGTTCAATGCAGTCAAGTACT‑CCCAGGACGAA‑GGCAGCATCCGCATGCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCAttt < 3:294814/149‑1 (MQ=255) gAATTGCGCAGTGCCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGTTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCAttt < 8:26621/149‑1 (MQ=255) aaTTGCGCAGTGCCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTg < 6:86169/149‑1 (MQ=255) ttGCGCAGTGCCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAg > 2:83493/1‑114 (MQ=255) ttGCGCAGTGCCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAg < 1:83493/114‑1 (MQ=255) gcAGTGCCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGtgg > 3:296938‑M2/1‑120 (MQ=255) ttttCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCAttt < 4:215050/134‑1 (MQ=255) ttttCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCAttt > 3:215050/1‑134 (MQ=255) cAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCt > 3:363636/1‑149 (MQ=255) aT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTc < 2:99650/149‑1 (MQ=255) aT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTc < 5:193645/149‑1 (MQ=255) t‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCGTc > 4:117226/1‑148 (MQ=255) gtgtTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCt < 1:118954/145‑1 (MQ=255) tgtTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACcgc > 8:59713/1‑149 (MQ=255) tgtTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACcgc < 2:298055/149‑1 (MQ=255) gtTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACcgcg > 5:190331/1‑149 (MQ=255) ttCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGt < 6:173947/149‑1 (MQ=255) aTGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGAc > 3:110685/1‑149 (MQ=255) tGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCAtt < 1:378784/113‑1 (MQ=255) tGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCAtt > 2:378784/1‑113 (MQ=255) tGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTACAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACt > 3:69469/1‑149 (MQ=255) gTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAg > 1:10554/1‑149 (MQ=255) aaGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGcc < 7:20966/148‑1 (MQ=255) aGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTACAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGt < 4:69469/149‑1 (MQ=255) gTACA‑CCCAGTACTAC‑GGCAGCATCCGCATCCGCTGGTGGGCCTATGCCCAGGGCGCACACGTGTCGGTGCAGGACTCGGGGGTGGGCATGGAt < 6:362322/94‑1 (MQ=255) a‑cCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACCCCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCAAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATc > 4:253757/1‑149 (MQ=255) a‑cCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCTCGTAGACTCCAGCCGTGCATc > 7:350799/1‑149 (MQ=255) ccAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGtgg > 7:135928‑M2/1‑77 (MQ=255) ccAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGtgg < 8:135928‑M2/80‑4 (MQ=255) ccAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCg > 7:293608/1‑148 (MQ=255) gaGGACGAT‑GGCAGCATCCGCATCCGCTGGTTGGCCGATGCCCAGTGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGaa < 3:2041/148‑1 (MQ=255) gACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATAc > 7:321430/1‑149 (MQ=255) gACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATAc > 7:122195/1‑149 (MQ=255) aa‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTTCAGCCGTGCATCGAATACcggc < 7:59713/149‑1 (MQ=255) ggCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACcggcgg > 3:287993/1‑149 (MQ=255) ggCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACcggcgg > 6:113915/1‑149 (MQ=255) catccgcTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTgg < 6:190331/149‑1 (MQ=255) atccgcTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTggg < 8:293608/149‑1 (MQ=255) agccgcTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTggg < 3:350278/147‑1 (MQ=255) gggCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATc < 8:321430/149‑1 (MQ=255) ggCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATc < 5:392588/148‑1 (MQ=255) gCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGt < 4:363636/149‑1 (MQ=255) ccGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGt < 4:319073/148‑1 (MQ=255) ccGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGt > 3:319073/1‑148 (MQ=255) cGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGtgggcatcggcccaccagcggatgcggatgctgccttcgtcctgggtgtacttgactgcattgaacaccagattggaaaaggcactgcgcaattccgactcgctgccc < 3:107791‑M2/149‑109 (MQ=255) gATGCCCAcccccgagtcctgcaccgacaggtgtgcgccctgggcatcggcccaccagcggatgcggatgctgccttcgtcctgggtgtacttgactgcattgaacaccagattggaaaaggcactgcgcaattccgactcgctgccc < 4:287253‑M1/148‑141 (MQ=255) gATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGtgggcatcggcccaccagcggatgcggatgctgccttcgtcctgggtgtacttgactgcattgaacaccagattggaaaaggcactgcgcaattccgactcgctgccct < 2:46142‑M2/149‑110 (MQ=255) gATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCaa < 8:122195/149‑1 (MQ=255) tGCCCAcccccgagtcctgcaccgacaggtgtgcgccctgggcatcggcccaccagcggatgcggatgctgccttcgtcctgggtgtacttgactgcattgaacaccagattggaaaaggcactgcgcaattccgactcgctgcccttc < 6:367‑M1/149‑144 (MQ=255) cccAcccccgtgtcctgcaccgaccggtgtgcgccctgggcatcggcccaccagcggatgcggatgctggcttcgtcctgggtgtacttgactgcattgaacaccagattggaaaaggcactgcgcaattccgactcgctgcccttca < 8:254100‑M1/148‑145 (MQ=255) cccAcccccgagtcctgcaccgacaggtgtgcgccctgggcatcggcccaccagcggatgcggatgctgccttcgtcctgggtgtacttgactgcattgaacaccagattggaaaaggcactgcgcaattccgactcgctgcccttcag > 6:155196‑M1/1‑4 (MQ=255) cccAcccccgagtcctgcaccgacaggtgtgcgccctgggcatcggcccaccagcggatgcggatgctgccttcgtcctgggtgtacttgactgcattgaacaccagattggaaaaggcactgcgcaattccgactcgctgcccttca < 8:254098‑M1/148‑145 (MQ=255) cccAcccccgagtcctgcaccgacaggtgtgcgccctgggcatcggcccaccagcggatgcggatgctgccttcgtcctgggtgtacttgactgcattgaacaccagattggaaaaggcactgcgcaattccgactcgctgcccttca < 1:298055‑M1/148‑145 (MQ=255) ccAcccccgagtcctgcaccgacaggtgtgcgccctgggcatcggcccaccagcggatgcggatgctgccttcgtcctgggtgtacttgactgcattgaacaccagattggaaaaggcactgcgcaattccgactcgctgcccttcagc > 5:212905‑M1/1‑3 (MQ=255) ccAcccccgagtcctgcaccgacaggtgtgcgccctgggcatcggcccaccagcggatgcggatgctgccttcgtcctgggtgtacttgactgcattgaacaccagattggaaaaggcactgcgcaattccgactcgctgcccttcagc > 1:388077‑M1/1‑3 (MQ=255) ccAcccccgagtcctgcaccgacaggtgtgcgccctgggcatcggcccaccagcggatgcggatgctgccttcgtcctgggtgtacttgactgcattgaacaccagattggaaaaggcactgc > 3:296938‑M1/1‑3 (MQ=255) ccAcccccgagtcctgcaccgacaggtgtgcgccctgggcatcggcccaccagcggatgcggatgctgccttcgtcctgg > 7:135928‑M1/1‑3 (MQ=255) ccAcccccgagtcctgcaccgacaggtgtgcgccctgggcatcggcccaccagcggatgcggatgctgccttcgtcctgg < 8:135928‑M1/80‑78 (MQ=255) ccAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCa > 7:349995/1‑143 (MQ=255) ccAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCa < 8:349995/143‑1 (MQ=255) ccAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCAtg > 1:156491/1‑149 (MQ=255) ccAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCAtg > 8:127447/1‑149 (MQ=255) ccAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCGGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCAtg > 6:412099/1‑149 (MQ=255) cAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCAtgt < 4:287993/149‑1 (MQ=255) cAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCAtgt > 2:24033/1‑149 (MQ=255) aGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCAtgtg < 7:127447/149‑1 (MQ=255) | AGCGCATCAACCTGGAAGCGGCGCCTGGCGTCAAGCTGAAGGGCAGCGAGTCGGAATTGCGCAGTGCCTTTTCCAAT‑CTGGTGTTCAATGCAGTCAAGTACA‑CCCAGGACGAA‑GGCAGCATCCGCATCCGCTGGTGGGCCGATGCCCAGGGCGCACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTG > NC_002947/6066784‑6067079 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |