New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 609645581 (1.240)3 (0.050) 3/248 NT 4.1% coding (243/1416 nt) pycA pyruvate carboxylase subunit A
?NC_002947 = 6096480 66 (1.080)coding (218/1416 nt) pycA pyruvate carboxylase subunit A
Rejected: Frequency below/above cutoff threshold.

Only 100 of 115 total aligned reads displayed.

GGGTTACCGGCACACCGGCGGCGATCATGGTGCGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTGCGCGGGTTGAGGTAACCGGCCAGCGGCTCGGCACCGATGCTGTGTGCTTCGTCAGCGCGCTTGACGTGCAAGGCATGCCGGTCGGCGTCGGAAA  >  NC_002947/6096307‑6096603
                                                                                                                                                      |                                                                                                                                                    
gggTTACCGGCACACCGGCGGCGATCATGGTGCGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCG                                                                                                                                                      >  5:310868‑M1/1‑149 (MQ=255)
  gTTACCGGCACACCGGCGGCGATCATGGTGCGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTa                                                                                                                                                    <  8:155077/149‑1 (MQ=255)
   ttACCGGCACACCGGCGGCGATCATGGTGCGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAg                                                                                                                                                   >  7:54264/1‑149 (MQ=255)
      ccGGCACACCGGCGGCGATCATGGTGCGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGcc                                                                                                                                                 <  8:166626/148‑1 (MQ=255)
      ccGGCACACCGGCGGCGATCATGGTGCGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCt                                                                                                                                                >  2:167532/1‑149 (MQ=255)
       cGGCACACCGGCGGCGATCATGGTGCGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTg                                                                                                                                               >  1:177525/1‑149 (MQ=255)
       cGGCACACCGGCGGCGATCATGGTGCGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTg                                                                                                                                               >  2:188249/1‑149 (MQ=255)
       cGGCACACCGGCGGCGATCATGGTGCGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTg                                                                                                                                               >  4:216653/1‑149 (MQ=255)
        ggCACACCGGCGGCGATCATGGTGCGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTgg                                                                                                                                              <  2:396282/149‑1 (MQ=255)
        ggCACACCGGCGGCGATCATGGTGCGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTgg                                                                                                                                              <  4:237510/149‑1 (MQ=255)
         gCACACCGGCGGCGATCATGGTGCGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTggg                                                                                                                                             <  2:376341/149‑1 (MQ=255)
             acCGGCGGCGATCATGGTGCGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTg                                                                                                                                           >  4:199794/1‑147 (MQ=255)
              ccGGCGGCGATCATGGTGCGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAg                                                                                                                                        <  6:54314/149‑1 (MQ=255)
                     cgATCATGGTGCGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCGCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATca                                                                                                                                 <  8:76294/149‑1 (MQ=255)
                     cgATCATGGTGCGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATca                                                                                                                                 <  5:63532/149‑1 (MQ=255)
                     cgATCATGGTGCGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATca                                                                                                                                 <  2:177525/149‑1 (MQ=255)
                      gATCATGGTGCGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATcac                                                                                                                                <  8:13398/149‑1 (MQ=255)
                        tCATGGTGCGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAg                                                                                                                              >  8:286616/1‑149 (MQ=255)
                          aTGGTGCGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGc                                                                                                                             <  1:167532/148‑1 (MQ=255)
                          aTGGTGCGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGc                                                                                                                             <  2:243533/148‑1 (MQ=255)
                          aTGGTGCGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCc                                                                                                                            >  6:225057‑M2/1‑148 (MQ=255)
                           tGGTGCGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCcg                                                                                                                           >  5:405263‑M2/1‑147 (MQ=255)
                           tGGTGCGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCcg                                                                                                                           <  5:155597‑M2/149‑3 (MQ=255)
                                cggcgCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCTCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCcggtttc                                                                                                                      >  7:261443‑M2/1‑142 (MQ=255)
                                cggcgCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCcggttt                                                                                                                       >  6:227912‑M2/1‑142 (MQ=255)
                                 ggcgCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCcggtttcc                                                                                                                     >  8:157216‑M2/1‑141 (MQ=255)
                                  ccgcgcaTCGGTCTTGTCGCCCCAACGGCGAATCACGTCGGCGGCCGGGCCGATTAACTTGATCGCGCGCTCTGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGgctgtgatgccctgcacccaggctacggtttcct                                                                                                                    <  4:293677‑M1/148‑35 (MQ=255)
                                    gcgcTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCa                                                                                                                                         >  3:131065/1‑126 (MQ=255)
                                      gcTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGc                                                                                                                >  7:157591/1‑149 (MQ=255)
                                        ttCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCcggtttcc                                                                                                                     <  4:82083‑M2/142‑9 (MQ=255)
                                        ttCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCcggtttcc                                                                                                                     >  3:82083‑M2/1‑134 (MQ=255)
                                          cGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAg                                                                                                             <  1:188249/148‑1 (MQ=255)
                                            gTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGtt                                                                                                          <  4:264534/149‑1 (MQ=255)
                                               ttGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCAc                                                                                                       <  8:157591/149‑1 (MQ=255)
                                                 gTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCAc                                                                                                       >  4:341571/1‑147 (MQ=255)
                                                  tCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAg                                                                                                    >  1:273188/1‑149 (MQ=255)
                                                  tCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAg                                                                                                    >  6:213048/1‑149 (MQ=255)
                                                     cccATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCAc                                                                                                       <  5:140620/143‑1 (MQ=255)
                                                     cccATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCAc                                                                                                       >  6:140620/1‑143 (MQ=255)
                                                      ccATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAg                                                                                                             >  7:31419/1‑136 (MQ=255)
                                                      ccATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAg                                                                                                             <  8:31419/136‑1 (MQ=255)
                                                      ccATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTg                                                                                                >  4:79101/1‑149 (MQ=255)
                                                         tACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCca                                                                                                                    >  2:393269/1‑126 (MQ=255)
                                                         tACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCca                                                                                                                    <  1:393269/126‑1 (MQ=255)
                                                          aCGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTGcgcg                                                                                            >  6:323191/1‑149 (MQ=255)
                                                            ggCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGgctgtgatgccctgcacccaggctacggtttccttt                                                                                                                  <  4:126443‑M1/125‑37 (MQ=255)
                                                             gCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTGCGCGGGt                                                                                         <  7:360725/149‑1 (MQ=255)
                                                              cGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTGCGCGGGtt                                                                                        <  1:82531/149‑1 (MQ=255)
                                                              cGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTGCGCGGGtt                                                                                        <  4:158341/149‑1 (MQ=255)
                                                                aaTCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTGCGCGGGTTGa                                                                                      <  3:341571/149‑1 (MQ=255)
                                                                aaTCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTGCGCGGGTTGa                                                                                      <  8:54264/149‑1 (MQ=255)
                                                                 aTCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTGCGCGGGTTGAg                                                                                     >  7:28439/1‑149 (MQ=255)
                                                                 aTCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTGCGCGGGTTGAg                                                                                     <  3:199794/149‑1 (MQ=255)
                                                                    aCGTCGGCGGCAGTGCCGATGAACTTTATCCCGCGCTCGGCGCTAATTTCTGCCAGTTCAGCGTTTTCCGAAAC‑GA‑ATCCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTGCTCGGGTTGATGt                                                                                   <  6:77780/148‑1 (MQ=255)
                                                                      gTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTGCGCGGGTTGAGGTAAc                                                                                >  6:185601/1‑149 (MQ=255)
                                                                        cggcggCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCtt                                                                                                 >  1:228557/1‑130 (MQ=255)
                                                                        cggcggCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCtt                                                                                                 <  2:228557/130‑1 (MQ=255)
                                                                         ggcggcCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTGCGCGGGTTGAGGTAACCgg                                                                             >  3:343610/1‑149 (MQ=255)
                                                                         ggcggcCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTGCGCGGGTTGAGGTAACCg                                                                              <  8:28439/148‑1 (MQ=255)
                                                                             gccgggccgATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAGAGAGAACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTGCGCGGGTTGAGGTAACCGGc                                                                            >  1:120761/1‑148 (MQ=255)
                                                                                   ccgATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTGCGCGGGTTGAGGTAACCGGCCAGCGGCTc                                                                   <  8:21812/149‑1 (MQ=255)
                                                                                       tGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTgcgc                                                                                             >  7:212426/1‑119 (MQ=255)
                                                                                          aCTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTGCGCGGGTTGAGGTAACCGGCCAGCGGCTCGGCACCg                                                            <  4:343610/149‑1 (MQ=255)
                                                                                              gATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTGCGCGGGTTGAGGTAACCGGCCAGCGGCTCGGCACCGATGc                                                        >  2:202362/1‑149 (MQ=255)
                                                                                                   cgcgCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGGAGGGCATCACAGCCGGTTTCCAGAGCCAGGTTCACCAGCTTGCGCGGGTTGAGGTAACCGGCCAGCGGCTCGGCACCGATGCtgtgt                                                   <  7:87496/149‑1 (MQ=255)
                                                                                                   cgcgCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTGCGCGGGTTGAGGTAACCGGCCAGCGGCTCGGCACCGATGCtgtgt                                                   <  6:223920/149‑1 (MQ=255)
                                                                                                       cTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTGCGCGGGTTGAGGTAACCGGCCAGCGGCTCGGCACCGATGCTGTGTGCtt                                               <  3:378136/149‑1 (MQ=255)
                                                                                                          ggCGCAAATTTCTGCCAGTTCAGCTTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTGCGCGGGTTg                                                                                       <  1:323726/106‑1 (MQ=255)
                                                                                                          ggCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTGCGCGGGTTg                                                                                       >  2:323726/1‑106 (MQ=255)
                                                                                                          ggCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTGCGCGGGTTGAGGTAACCGGCCAGCGGCTCGGCACCGATGCTGTGTGCTTc                                              <  7:286616/147‑1 (MQ=255)
                                                                                                          ggCGCAAATTTCTGCCAGTTCAGCGTTTTCAGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTGCGCGGGTTGAGGTAACCGGCCAGCGGCTCGGCACCGATGCTGTGTGCTTc                                              <  3:5774/147‑1 (MQ=255)
                                                                                                            cgcAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTGCGCGGGTTGAGGTAACCGGCCAGCGGCTCGGCACCGATGCTGTGTGCTTCGt                                            >  4:50988/1‑147 (MQ=255)
                                                                                                               aaaTTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTGCGCGGGTTGAGGTAACCGGCCAGCGGCTCGGCACCGATGCTGTGTGCTTCGTCAgcg                                       >  6:198518/1‑149 (MQ=255)
                                                                                                                  tttCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGTGTGCAGGGCATCACAGCCGGTTTGCACAGCCAGGTTCACCAGCTTGCGCGGGTTGAGGTAACCGGCCAGCTGCTCGGCACCGATGCTGTGTGCTTCGTCAgcgcgc                                    <  6:155597/149‑1 (MQ=255)
                                                                                                                        ccAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTGCGCGGGTTGAGGTAACCGGCCAGCGGCTCGGCACCGATGCTGTGTGCTTCGTCAGCGCGCTTGAc                               <  7:154385/148‑1 (MQ=255)
                                                                                                                         cAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTGCGCGGGTTGAGGTAACCGGCCAGCGGCTCGGCACCGATGCTGTGTGCTTCGTCAGCGCGCTTGACGt                             <  5:185601/149‑1 (MQ=255)
                                                                                                                         cAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTGCGCGGGTTGAGGTAACCGGCCAGCGGCTCGGCACCGATGCTGTGTGCTTCGTCAGCGCGCTTGACGt                             >  3:88128/1‑149 (MQ=255)
                                                                                                                          aGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTGCGCGGGTTGAGGTAACCGGCCAGCGGCTCGGCACCGATGCTGTGTGCTTCGTCAGCGCGCTTGACGTg                            <  5:213048/149‑1 (MQ=255)
                                                                                                                              cAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTGCGCGGGTTGa                                                                                      <  2:306568/87‑1 (MQ=255)
                                                                                                                              cAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTGCGCGGGTTGa                                                                                      >  1:306568/1‑87 (MQ=255)
                                                                                                                               aGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTGCGCGGGTTGAGGTAACCGGCCAGCGGCTCGGCACCGATGCTGTGTGCTTCGTCAGCGCGCTTGACGTGCAAg                        <  2:120761/148‑1 (MQ=255)
                                                                                                                                         gAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACTCCCAGGTTCACCAGCTTGCGCGGGTTGAGGTAACCGGCCAGCGGCTCGGCACCGATGCTGTGTGCTTCGTCAGCGCGCTTGACGTGCAAGGCATGCCGGTc             >  1:89895/1‑149 (MQ=255)
                                                                                                                                         gAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTGCGCGGGTTGAGGTAACCGGCCAGCGGCTCGGCACCGATGCTGTGTGCTTCGTCAGCGCGCTTGACGTGCAAGGCATGCCGGTc             >  3:199671/1‑149 (MQ=255)
                                                                                                                                          aaaG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCcggtttcctttcggaaaacgctgaactggcagaaatttgcgccgagcgcgggatcaagttcatcggcccggccgccgacgtgattcgcc                                    >  3:126443‑M2/1‑36 (MQ=255)
                                                                                                                                          aaaG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCcggtttcctttcggaaaacgctgaactggcagaaatttgcgccgagcgcgggatcaagttcatcggcccggccgccgacgtgattcgcc                                    <  4:126443‑M2/125‑90 (MQ=255)
                                                                                                                                           aaG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTGCGCGGGTTGAGGTAACCGGCCAGCGGCTCGGCACCGATGCTGTGTGCTTCGTCAGCGCGCTTGACGTGCAAGGCATGCCGGTCgg           >  5:216773/1‑149 (MQ=255)
                                                                                                                                            aG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCcggtttcctttcggaaaacgctgaactggcagaaatttgcgcagagcgcgcgatcaagttaatcggcccggccgccgacgtgattcgccgttggggcgacaagaccgatgcgcgg          <  4:293677‑M2/149‑116 (MQ=255)
                                                                                                                                            aG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTGCGCGGGTTGAGGTAACCGGCCAGCGGCTCGGCACCGATGCTGTGTGCTTCGTCAGCGCGCTTGACGTGCAAGGCATGCCGGTCGGc          <  2:273188/149‑1 (MQ=255)
                                                                                                                                             g‑gA‑AACCGgctgtgatgccctgcacccaggctacggtttcctttcggaaaacgctgaactggcagaaatttgcgccgagcgcgggatcaagttcatcggcccggccgccgacgtgattcgccgtatgggcgacaagaccgaagcgcgcc         >  2:128112‑M1/1‑8 (MQ=255)
                                                                                                                                             g‑gA‑AACCGgctgtgatgccctgcacccaggctacggtttcctttcggaaaacgctgaactggcagaaatttgcgccgagcgcgggatcaagttcatcggcccggccgccgacgtgattcgccgtatgggcgacaagaccgaagcgcgcc         >  6:195980‑M1/1‑8 (MQ=255)
                                                                                                                                             g‑gA‑AACCGgctgtgatgccctgcacccaggctacggtttcctttcggaaaacgctgaactggcagaaatttgcgccgagcgcgggatcaagttcatcggcccggccgccgacgtgattcgccgtatgggcgacaagaccgaagcgcgcc         >  8:157216‑M1/1‑8 (MQ=255)
                                                                                                                                             g‑gA‑AACCGgctgtgatgccctgcacccaggctacggtttcctttcggaaaacgctgaactggcagaaatttgcgccgagcgcgggatcaagttcatcggcccggccgccgacgtgattcgccgtatgggcgacaagaccgaa                >  3:82083‑M1/1‑8 (MQ=255)
                                                                                                                                             g‑gA‑AACCGgctgtgatgccctgcacccaggctacggtttcctttcggaaaacgctgaactggcagaaatttgcgccgagcgcgggatcaagttcatcggcccggccgccgacgtgattcgccgtatgggcgacaagaccgaa                <  4:82083‑M1/142‑135 (MQ=255)
                                                                                                                                               gA‑AACCGgctgtgatgccctgcacccaggctacggtttcctttcggaaaacgctgaactggcagaaatttgcgccgagcgagggatcaagttcatcggcccggccgccgacgtgattcgccgtatgggcgacaagaccgaagcgcgccg        >  7:261443‑M1/1‑7 (MQ=255)
                                                                                                                                                a‑aaCCGgctgtgatgccctgcacccaggctacggtttcctttcggaaaacgctgaactggcagaaatttgcgccgagcgcgggatcaagttcatcggcccggccgccgacgtgattcgccgtatgggcgacaagaccgaagcgcgccg        >  6:227912‑M1/1‑6 (MQ=255)
                                                                                                                                                  aaCCGTAGCCTGGGTGCAGGGGATCTCAGCCGGTTTCCACAGCCAGGTTCACCTGCTTGCGCGGGTTGAGGAAACCGGCCAGCGGCGCGGAAGCGATGCTGTGTGCTTCGTCAGCGCGCTTGACGTGCAAGGGATGCCGGTCGGCGTCg      <  2:89895/149‑1 (MQ=255)
                                                                                                                                                     cGgctgtgatgccctgcacccaggctacggtttcctttcggaaaacgctgaactggcagaaatttgcgccgagcgcgggatcaagttcatcggcccggccgccgacgtgattcgccgtatgggcgacaagaccgaagcgcgccgcacca   >  5:405263‑M1/1‑2 (MQ=255)
                                                                                                                                                      ggctgtgatgccctgcacccaggctacggtttcctttcggaaaacgctgaactggcagaaatttgcgccgagcgcgggatcaagttcatcggcccggccgccgacgtgattcgccgtatgggcgacaagaccgaagcgcgccgcaccat  <  1:301403‑M1/149‑149 (MQ=255)
                                                                                                                                                      ggctgtgatgccctgcacccaggctacggtttcctttcggaaaacgctgaactggcagaaatttgcgccgagcgcgggatcaagttcatcggcccggccgccgacgtgattcgccgtatgggcgacaagaccgaagcgcgccgcaccat  >  6:225057‑M1/1‑1 (MQ=255)
                                                                                                                                                      gTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTGCGCGGGTTGAGGTAACCGGCCAGCGGCTCGGCACCGATGCTGTGTGCTTCGTCAGCGCGCTTGACGTGCAAGGCATGCCGGTCGGCGTCGGaa   >  5:232317/1‑148 (MQ=255)
                                                                                                                                                      |                                                                                                                                                    
GGGTTACCGGCACACCGGCGGCGATCATGGTGCGGCGCGCTTCGGTCTTGTCGCCCATACGGCGAATCACGTCGGCGGCCGGGCCGATGAACTTGATCCCGCGCTCGGCGCAAATTTCTGCCAGTTCAGCGTTTTCCGAAAG‑GA‑AACCGTAGCCTGGGTGCAGGGCATCACAGCCGGTTTCCACAGCCAGGTTCACCAGCTTGCGCGGGTTGAGGTAACCGGCCAGCGGCTCGGCACCGATGCTGTGTGCTTCGTCAGCGCGCTTGACGTGCAAGGCATGCCGGTCGGCGTCGGAAA  >  NC_002947/6096307‑6096603

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.