New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1331705	NA (NA)	3 (0.050)	3/254	NT	NA	coding (930/1644 nt)	PP_1157	acetolactate synthase
	?	NC_002947	= 1331731	NA (NA)					coding (956/1644 nt)	PP_1157	acetolactate synthase

CGATGTGATCGAGAAGCCGCCGTTCTTCATGGTCCGTGGCGGCACCGAAGTCATCCACATCAACTTCCGCTCTGCCGAAGTCGATGCCGTGTACTTCCCGCAAGTAGAAGTGATCGGCGACATCGCCAACGCCGTGTGGCAGATCAGTG  >  NC_002947/1331591‑1331739                                                                                                                                             |         cgttgtgATCGAGAAGCCGCCGTTCTTCATGGTCCGTGGCGGCACCGAAGTCATCCACATCAACTTCCGCTCTGCCGAAGTCGATGCCGTGTACTTCCCGCAAGTAGAAGTGATCGGCGACATCGCCAACGCCGTGTGGCAGATCAGTg  <  1:344740/146‑1 (MQ=1)                                                                                                                                             |         CGATGTGATCGAGAAGCCGCCGTTCTTCATGGTCCGTGGCGGCACCGAAGTCATCCACATCAACTTCCGCTCTGCCGAAGTCGATGCCGTGTACTTCCCGCAAGTAGAAGTGATCGGCGACATCGCCAACGCCGTGTGGCAGATCAGTG  >  NC_002947/1331591‑1331739

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.