New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 140814543 (0.660)4 (0.060) 4/254 NT 7.4% coding (598/1509 nt) PP_1230 hypothetical protein
?NC_002947 = 1408184 59 (0.940)coding (637/1509 nt) PP_1230 hypothetical protein

GCCGCTCAAGTTTGACGAAGCGGATGGCAACAGCCTTGACTTCTCGGGCATGCAGTTCGAAGTCAGTGGGGACAAGGAGGGCAAGGCCTCGAAGTTCCACGGCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGATATGGCGTTGGCCGAAACCAAGGTCATCCTTGGGCCGAAACAGCAGGTGCTGCTGATCAAGG  >  NC_002947/1408036‑1408331
                                                                                                                                                    |                                                                                                                                                   
gccgcTCAAGTTTGACGAAGCGGATGGCAACAGCCTTGACTTCTCGGGCATGCAGTTCGAAGTCAGTGGGGACAAGGAGGGCAAGGCCTCGAAGTTCCACGGCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAgccgc                                                                                                                                                     >  8:258097/1‑149 (MQ=255)
 cctcgcaagttTGACGATGCGGATGGCAACAGCCTTGACTTCTCGTGCATGCAGTTGGAAGTCAGTGTGGACAAGGAGGGCAAGGGCTCGAAGTTCCACGGCCAGGCCGACAGGCTGTTGATGAAATGGGTGCATGACGTCCAGCCGCc                                                                                                                                                    >  4:370235‑M2/6‑148 (MQ=255)
   gCTCAAGTTTGACGAAGCGGATGGCAACAGCCTTGACTTCTCGGGCATGCAGTTCGAAGTCAGTGGGGACAAGGAGGGCAAGGCCTCGAAGTTCCACGGCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCcgg                                                                                                                                                  >  2:295340‑M2/1‑146 (MQ=255)
         gTTTGACGAAGCGGATGGCAACAGCCTTGACTTCTCGGGCATGCAGTTCGAAGTCAGTGGGGACAAGGAGGGCAAGGCCTCGAAGTTCCACGGCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCcgg                                                                                                                                                  <  2:375942‑M2/143‑4 (MQ=255)
         gTTTGACGAAGCGGATGGCAACAGCCTTGACTTCTCGGGCATGCAGTTCGAAGTCAGTGGGGACAAGGAGGGCAAGGCCTCGAAGTTCCACGGCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCcgg                                                                                                                                                  >  1:375942‑M2/1‑140 (MQ=255)
         gTTTGACGAAGCGGATGGCAACAGCCTTGACTTCTCGGGCATGCAGTTCGAAGTCAGTGGGGACAAGGAGGGCAAGGCCTCGAAGTTCCACGGCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCt                                                                                                                                            >  4:284343/1‑149 (MQ=255)
            tGACGAAGCGGATGGCAACAGCCTTGACTTCTCGGGCATGCAGTTCGAAGTCAGTGGGGACAAGGAGGGCAAGGCCTCGAAGTTCCACGGCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTc                                                                                                                                          <  3:279225/148‑1 (MQ=255)
              aCGAAGCGGATGGCAACAGCCTTGACTTCTCGGGCATGCAGTTCGAAGTCAGTGGGGACAAGGAGGGCAAGGCCTCGAAGTTCCACGGCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAg                                                                                                                                       <  4:325462/149‑1 (MQ=255)
                gAAGCGGATGGCAACAGCCTTGACTTCTCGGGCATGCAGTTCGAAGTCAGTGGGGACAAGGAGGGCAAGGCCTCGAAGTTCCACGGCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCt                                                                                                                                     >  4:392110/1‑149 (MQ=255)
                   gCGGATGGCAACAGCCTTGACTTCTCGGGCATGCAGTTCGAAGTCAGTGGGGACAAGGAGGGCAAGGCCTCGAAGTTCCACGGCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAg                                                                                                                                       >  1:198197/1‑144 (MQ=255)
                   gCGGATGGCAACAGCCTTGACTTCTCGGGCATGCAGTTCGAAGTCAGTGGGGACAAGGAGGGCAAGGCCTCGAAGTTCCACGGCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAg                                                                                                                                       <  2:198197/144‑1 (MQ=255)
                            aaCAGCCTTGACTTCTCGGGCATGCAGTTCGAAGTCAGTGGGGACAAGGAGGGCAAGGCCTCGAAGTTCGACGGCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGAc                                                                                                                         <  5:97649/149‑1 (MQ=255)
                            aaCAGCCTTGACTTCTCGGGCATGCAGTTCGAAGTCAGTGGGGACAAGGAGGGCAAGGCCTCGAAGTTCCACGGCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGa                                                                                                                                        <  8:328416/134‑1 (MQ=255)
                            aaCAGCCTTGACTTCTCGGGCATGCAGTTCGAAGTCAGTGGGGACAAGGAGGGCAAGGCCTCGAAGTTCCACGGCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGa                                                                                                                                        >  7:328416/1‑134 (MQ=255)
                                  cTTGACTTCTCGGGCATGCAGTTCGAAGTCAGTGGGGACAAGGAGGGCAAGGCCTCGAAGTTCCACGGACAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTgg                                                                                                                   <  7:258097/149‑1 (MQ=255)
                                   ttGACTTCTCCGGCATGCAGTTACAAGTCAGAGGGGACAAGGAGGCCAAGGCCTCCAAGTTCCACGGCCAGGACGACAGCATCGTGATGAAATGGGTGCATGACGACCACCCGCCCGCCACCTTCGAGCTCAAAGGGCTGACGTATGGc                                                                                                                  >  8:76475/1‑149 (MQ=255)
                                    tGACTTCTCGGGCATGCAGTTCGAAGTCAGTGGGGACAAGGAGGGCAAGGCCTCGAAGTTCCACGGCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCg                                                                                                                 >  4:91721/1‑149 (MQ=255)
                                                 aTGCAGTTCGAAGTCAGTGGGGACAAGGAGGGCAAGGCCTCGAAGTTCCACGGCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGc                                                                                                    <  5:342321/149‑1 (MQ=255)
                                                                    gggACAAGGAGGGCAAGGCCTCGAAGTTCCACGGCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCa                                                                                           >  8:344984/1‑139 (MQ=255)
                                                                    gggACAAGGAGGGCAAGGCCTCGAAGTTCCACGGCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCa                                                                                           <  7:344984/139‑1 (MQ=255)
                                                                     ggACAAGGAGGGCAAGGCCTCGAAGTTCCACGGCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATc                                                                                 >  6:319074/1‑148 (MQ=255)
                                                                           ggaggGCAAGGCCTCGAAGTTCCACGGCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCg                                                                          <  2:343693/149‑1 (MQ=255)
                                                                           ggaggGCAAGGCCTCGAAGTTCCACGGCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCg                                                                          >  3:65995/1‑149 (MQ=255)
                                                                                 cAAGGCCTCGAAGTTCCACGGCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTaa                                                                                                             <  3:3104/108‑1 (MQ=255)
                                                                                 cAAGGCCTCGAAGTTCCACGGCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTaa                                                                                                             >  4:3104/1‑108 (MQ=255)
                                                                                 cAAGGCCTCGAAGTTCCACGGCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCAcc                                                                                                <  5:359876/121‑1 (MQ=255)
                                                                                 cAAGGCCTCGAAGTTCCACGGCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCAcc                                                                                                >  6:359876/1‑121 (MQ=255)
                                                                                      ccTCGAAGTTCCACGGCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGa                                                                >  7:82725/1‑148 (MQ=255)
                                                                                       cTCGAAGTTCCACGGCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGatt                                                              >  1:6067/1‑148 (MQ=255)
                                                                                        tCGAAGTTCCACGGCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGatat                                                             >  6:37478/1‑149 (MQ=255)
                                                                                          gAAGTTCCACGGCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGa                                                                                                                                        >  6:388608/1‑72 (MQ=255)
                                                                                          gAAGTTCCACGGCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGa                                                                                                                                        <  5:388608/72‑1 (MQ=255)
                                                                                                  aCGGCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCcggcctggccgtggaacttcgaggccttgccctccttgtccccactgacttcgaactgcatgcccgagaagtcaaggctgttgccatccgcttcgtc                                                    <  3:33897‑M2/148‑98 (MQ=255)
                                                                                                  aCGGCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGTGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGATATGGCGTTGGcc                                                   >  2:117662/1‑149 (MQ=255)
                                                                                                  aCGGCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGATATGGCGTTGGcc                                                   >  8:261110/1‑149 (MQ=255)
                                                                                                  aCGGCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGATATGGCGTTGGcc                                                   <  3:204208/149‑1 (MQ=255)
                                                                                                   cGGCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCACACGATGCCATCTATGTCGGCAACGTCGATATGGCGTTGGc                                                    >  2:378854/1‑147 (MQ=255)
                                                                                                   cGGCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCACACGATGCCATCTATGTCGGCAACGTCGATATGGCGTTGGc                                                    <  1:378854/147‑1 (MQ=255)
                                                                                                     gCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGTGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGATATGGCGTTGGCCGaa                                                <  1:117662/149‑1 (MQ=255)
                                                                                                      ccAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCcggcctggccgtggaacttcgaggccttgccctccttgtccccactgacttcgaactgcatgcccgagaagtcaaggctgttgccatccgcttcgtcaa                                                  <  2:216837‑M2/146‑100 (MQ=255)
                                                                                                      ccAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCcggcctggccgtggaacttcgaggccttgccctccttgtccccactgacttcgaactgcatgcccgagaagtcaaggctgttgccatccgcttcgtcaa                                                  >  1:216837‑M2/1‑47 (MQ=255)
                                                                                                      ccAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGATATGGCGTTGGCCGaaa                                               <  5:319074/149‑1 (MQ=255)
                                                                                                      ccAGGCCGACAGGCTGGTAATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGATATGGCGTTGGCCGaaa                                               >  1:999/1‑149 (MQ=255)
                                                                                                        aGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGATATGGCGTTGGCCGAAAc                                              >  1:376718/1‑148 (MQ=255)
                                                                                                          gCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGATATGGCGTTGGcc                                                   >  2:167226/1‑141 (MQ=255)
                                                                                                          gCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGATATGGCGTTGGcc                                                   <  1:167226/141‑1 (MQ=255)
                                                                                                          gCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGATATGGCGTTGGCCGAAAcc                                             >  2:128700/1‑147 (MQ=255)
                                                                                                                 ggCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGATATGGCGTTGGCCGAAACCAAGGTCATc                                    <  3:91721/149‑1 (MQ=255)
                                                                                                                  gCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGATATGTCGTTGGCCGAAACCAAGGTCATcc                                   <  7:58230/149‑1 (MQ=255)
                                                                                                                      gTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGATATGGCGTTGGCCGAAACCAAGGTCATCCTTg                                <  5:37478/148‑1 (MQ=255)
                                                                                                                         atgaAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGATATGGCGTTGGCCGAAACCAAGGTCATCCTTGGGcc                            >  8:269297/1‑149 (MQ=255)
                                                                                                                           gaAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGATATGGCGTTGGCCGAAACCAAGGTCATCCTTGGGCCg                           >  2:215612/1‑148 (MQ=255)
                                                                                                                            aaaTGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGATATGGCGt                                                        >  2:92703/1‑118 (MQ=255)
                                                                                                                            aaaTGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGATATGGCGt                                                        <  1:92703/118‑1 (MQ=255)
                                                                                                                             aaTGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGATATGGCGTTGGCCGAAACCAAGGTCATCCTTGGGCCGaaa                        <  8:82725/149‑1 (MQ=255)
                                                                                                                             aaTGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGCGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGATATGGCGTTGGCCGAAACCAAGGTCATCCTTGGGCCGaaa                        <  3:284343/149‑1 (MQ=255)
                                                                                                                                 ggTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGATATGGCGTTGGCCGAAACCAAGGTCATCCTTGGGCCGAAAcagc                    <  2:999/149‑1 (MQ=255)
                                                                                                                                  gTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGATATGGCGTTGGCCGAAACCAAGGTCATCCTTGGGCCGAAAcagca                   <  1:215612/149‑1 (MQ=255)
                                                                                                                                   tGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGATATGGCGTTGGCCGAAACCAAGGTCATCCTTGGGCCGAAAcagcag                  >  2:326851/1‑149 (MQ=255)
                                                                                                                                    gCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGATATGGCGTTGGCCGAAACCAAGGTCATCCTTGGGCCGAAACAGCAgg                 >  5:352321/1‑149 (MQ=255)
                                                                                                                                    gCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGATATGGCGTTGGCCGAAACCAAGGTCATCCTTGGGCCGAAACAGCAgg                 >  7:311166/1‑149 (MQ=255)
                                                                                                                                        gacgacCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGATATGGCGTTGGCCGAAACCAAGGTCATCCTTgg                               <  6:61925/131‑1 (MQ=255)
                                                                                                                                        gacgacCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGATATGGCGTTGGCCGAAACCAAGGTCATCCTTgg                               >  5:61925/1‑131 (MQ=255)
                                                                                                                                        gacgacCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGATATGGCGTTGGCCGAAACCAAGGTCATCCTTGGGc                             <  2:214499/133‑1 (MQ=255)
                                                                                                                                        gacgacCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGATATGGCGTTGGCCGAAACCAAGGTCATCCTTGGGc                             >  1:214499/1‑133 (MQ=255)
                                                                                                                                        gacgacCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGATATGGCGTTGGCCGAAACCAAGGTCATCCTTGGGCCGAAACAGCAGGtgct             >  3:333083/1‑149 (MQ=255)
                                                                                                                                           gacCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGATATGGCGTTGGCCGAAACCAAGGTCATCCTTGGGCCGAAACAGCAGGTgctgct          >  2:227660/1‑149 (MQ=255)
                                                                                                                                             ccAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGATATGGCGTTGGCCGAAACCAAGGTCATCCTTGGGCCGAAACAGCAGGTGCTGCTGa        >  5:136098/1‑149 (MQ=255)
                                                                                                                                              cAGCCGCcggcctggccgtggaacttcgaggccttgccctccttgtccccactgacttcgaactgcatgcccgagaagtcaaggctgttgccatccgcttcgtcaaacttgagcggcgccagctgaacctggctgaccacattgccgcc       >  4:33897‑M2/1‑7 (MQ=255)
                                                                                                                                                  cgccgGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGATATGGCGTTGGCCGAAACCAAGGTCATCCTTGGGCCGAAACAGCAGGTGCTGCTGATCAAg   <  7:261110/149‑1 (MQ=255)
                                                                                                                                                   gccgGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGATATGGCGTTGGCCGAAACCAAGGTCATCCTTTGGCCGAAACAGCAGGTGCTGCTGATCAAgg  <  7:76475/149‑1 (MQ=255)
                                                                                                                                                   gccgGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGATATGGCGTTGGCCGAAACCAAGGTCATCCTTGGGCCGAAACAGCAGGTGCTGCTGATCAAgg  <  1:326851/149‑1 (MQ=255)
                                                                                                                                                   gccgGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGATATGGCGTTGGCCGAAACCAAGGTCATCCTTGGGCCGAAACAGCAGGTGCTGCTGATCAAgg  <  1:128700/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
GCCGCTCAAGTTTGACGAAGCGGATGGCAACAGCCTTGACTTCTCGGGCATGCAGTTCGAAGTCAGTGGGGACAAGGAGGGCAAGGCCTCGAAGTTCCACGGCCAGGCCGACAGGCTGGTGATGAAATGGGTGCATGACGACCAGCCGCCGGCCACCTTCGAGCTCAAAGGGCTGACGTTTGGCGGTAACCTCGCAGCCACCGCGCACGATGCCATCTATGTCGGCAACGTCGATATGGCGTTGGCCGAAACCAAGGTCATCCTTGGGCCGAAACAGCAGGTGCTGCTGATCAAGG  >  NC_002947/1408036‑1408331

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.