New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1725387 =	50 (0.770)	5 (0.080)	5/256	NT	9.9%	coding (214/399 nt)	PP_1519	lipoprotein
	?	NC_002947	1725428 =	43 (0.680)					coding (173/399 nt)	PP_1519	lipoprotein

TGAACAGCAACTTGCCATTCAGCTCAATGCGCGCACTTACCGCATAGCGGTGGC‑CAGGCTTGACCTGCGCGGGGTCATAGGTGAGATGGAACGGCAGCGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCTCAGGGTGGCGGCAGGCGGCAGGGCAATGCGCTGCAGGTAGAAGACTTCA‑CCGTCCAGGCTGGCCTGGTTGGGTGGGGTTTGGCTGGAGCAGGCTGCAAGCAGGGAT  >  NC_002947/1725282‑1725571                                                                                                                                                    |                                                                                                                                                 tgaACAGCAACTTGCCATTCAGCTCAATGCGCGCACTTACCGCATAGCGGTGGC‑CAGGCTTGACCTGCGCGGGGGCATAGGTGAGATGGAACGGCAGCGGCACGTTGCCTCTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAggg                                                                                                                                                <  3:390072/149‑1 (MQ=255)  gaACAGCAACTTGCCATTCAGCTCAATGCGCGCACTTACCGCATAGCGGTGGC‑CAGGCTTGACCTGCGCGGGGTCATAGGTGAGATGGAACGGCAGCGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAgggg                                                                                                                                               >  7:30699/1‑149 (MQ=255)  ccaggccagcctggacggtgaagtcttctacctgcagcgcattgccctgccgcctgccgccaccctgagcgtggaactgcaggatgtgtcgctgatggacgccccTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAggg                                                                                                                                                >  7:62522‑M1/106‑149 (MQ=255)    aggccagcctggacggtgaagtcttctacctgcagcgcattgccctgccgcctgccgccaccctgagcgtggaactgcaggatgtgtcgctgatggacgccccTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGc                                                                                                                                              >  8:347672‑M1/104‑149 (MQ=255)     cAGCAACTTGCCATTCAGCTCAATGCGCGCACTTACCGCATAGCGGTGGC‑CAGGCTTGACCTGCGCGGGGTCATAGGTGAGATGGAACGGCAGCGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGt                                                                                                                                            >  1:388353/1‑149 (MQ=255)      aGCAACTTGCCATTCAGCTCAATGCGCGCACTTACCGCATAGCGGTGGC‑CAGGCTTGACCTGCGCGGGGTCATAGGTGAGATGGAACGGCAGCGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGTc                                                                                                                                           <  8:155747/149‑1 (MQ=255)           cTTGCCATTCAGCTCAATGCGCGCACTTACCGCATAGCGGTGGC‑CAGGCTTGACCTGCGCGGGGTCATAGGTGAGATGGAACGGCAGCGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGTCCATCa                                                                                                                                      <  6:333367/149‑1 (MQ=255)                cATTCAGCTCAATGCGCGCACTTACCGCATAGCGGTGGC‑CAGGCTTGACCTGCGCGGGGTCATAGGTGAGATGGAACGGCAGCGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGTCCATCAGCGa                                                                                                                                  >  4:108969/1‑148 (MQ=255)                 aTTCAGCTCAATGCGCGCACTTACCGCATAGCGGTCGC‑CAGGCTTGACCTGCGAGGGGTCATAGGTGAGATGGAACGGCAGCGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGTCCATCAGCGaca                                                                                                                                >  3:37743/1‑149 (MQ=255)                   tCAGCTCAATGCGCGCACTTACCGCATAGCGGTGGCTCAGGCTTGACCTGCGCGGGGTCATAGGTGAGATGGAACGGCAGCGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGTCCATCAGCGaca                                                                                                                                >  1:271658/1‑148 (MQ=255)                       cTCAATGCGCGCACTTACCGCATAGCGGTGGC‑CAGGCTTGACCTGCGCGGGGTCATAGGTGAGATGGAACGGCAGCGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGTCCATCAGCGACACATCCt                                                                                                                          >  6:349837/1‑149 (MQ=255)                       cTCAATGCGCGCACTTACCGCATAGCGGTGGC‑CAGGCTTGACCTGCGCGGGGTCATAGGTGAGATGGAACGGCAGCGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACCGCAGGGGCGTCCATCAGCGACACATCCt                                                                                                                          <  1:228258/149‑1 (MQ=255)                       cTCAATGCGCGCACTTACCGCATAGCGGTGGC‑CAGGCTTGACCTGCGCGGGGTCATAGGTGAGATGGAACGGCACCGGCACGTTGCCATTGACCGCGCCGGCCGGGCGCGCCAGGGTCCCGGCAGGGGCGGCCATCACCGCCCCATc                                                                                                                            >  4:278102/1‑147 (MQ=255)                          aaTGCGCGCACTTACCGCATAGCGGTGGC‑CAGGCTTGACCTGCGCGGGGTCATAGGTGAGATGGAACGGCAGCGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGTCCATCAGCGACACATCCTg                                                                                                                         <  4:233116/147‑1 (MQ=255)                             gcgcgcACTTACCGCATAGCGGTGGC‑CAGGCTTGACCTGCGCGGGGTCATAGGTGAGATGGAACGGCAGCGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGGCCAACAGCGACACAGCCAGCAGt                                                                                                                     >  4:174663/1‑148 (MQ=255)                                cgcACTTACCGCATAGCGGTGGC‑CAGGCTTGACCTGCGCGGGGTCATAGGTGAGATGGAACGGCAGCGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGTCCATCAGCGACACATCCTGCAGTTCCa                                                                                                                 <  4:94933/149‑1 (MQ=255)                                     ttACCGCATAGCGGTGGA‑CACGCTTGACCTGCGCGGGGTCATAGGTGAGATGGAACGCCAGCGGCACGTTGACTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCt                                                                                                             >  6:173428/1‑148 (MQ=255)                                           cATAGCGGTGGC‑CAGGCTTGACCTGCGCGGGGTCATAGGTGAGATGGAACGGCAGCGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCTCAGGGTg                                                                                                      >  6:286169/1‑149 (MQ=255)                                              aGCGGTGGC‑CAGGCTTGACCTGCGCGGGGTCATAGGTGAGATGGAACGGCAGCGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCTCAGGGTggcg                                                                                                   >  1:162585/1‑149 (MQ=255)                                                cGGTGGC‑CAGGCTTGACCTGCGCGGGGTCATAGGTGAGATGGAACGGCAGCGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGTCCATCAGCGACACATCCTGCAg                                                                                                                      >  5:22394/1‑128 (MQ=255)                                                cGGTGGC‑CAGGCTTGACCTGCGCGGGGTCATAGGTGAGATGGAACGGCAGCGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGTCCATCAGCGACACATCCTGCAg                                                                                                                      <  6:22394/128‑1 (MQ=255)                                                      c‑cAGGCTTGACCTGCGCGGGGTCATAGGTGAGATGGAACGGCAGCGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGGCCGTCAGCGACACATCCTGCAGTTCCCCGCAGAGGGTggggggcggggg                                                                                           >  8:152050/1‑142 (MQ=255)                                                        cAGGCTTGACCTGCGCGGGGTCATAGGTGAGATGGAACGGCAGCGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCTCAGGGTggcggcaggcgg                                                                                           >  5:191156/1‑148 (MQ=255)                                                        cAGGCTTGACCTGCGCGGGGTCATAGGTGAGATGGAACGGCAGCGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCTCAGGGTggcggcaggcgg                                                                                           >  3:78730/1‑148 (MQ=255)                                                         aGGCTTGACCTGCGCGGGGTCATAGGTGAGATGGAACGGCAGCGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCTCAGGGTggcggcaggcggca                                                                                         <  8:30699/149‑1 (MQ=255)                                                          ggCTTGACCTGCGCGGGGTCATAGGTGAGATGGAACGGCAGCGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCTCAGGGTGgcggcaggcggcag                                                                                        <  3:174663/149‑1 (MQ=255)                                                           gCTTGACCTGCGCGGGGTCATAGGTGAGATGGAACGGCAGCGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCTCAGGGTGGcggcaggcggcagg                                                                                       >  3:41375/1‑149 (MQ=255)                                                            cgtGACCTGCGCGGGGTCATAGGTGAGATGGAACGGCAGCGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCTGGGTCACGGCAGGGGCGTCGATCAGCGACTCATCCTGCAGTTCCACGCTCTGGGTGGCGGCAGGCGGCAggg                                                                                      <  7:152050/147‑1 (MQ=255)                                                            cTTGTCCTGCGCGGGGTCATAGGTGAGATGGAACGGCAGCGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCTCAGGGTGGCGGCAGGCGGCAggg                                                                                      <  2:388353/149‑1 (MQ=255)                                                                 ccTGCGCGGGGTCATAGGTGAGATGGAACGGCAGCGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCTCAGGGTGGCGGCAGGCGGCAGGGCAATg                                                                                 <  3:108969/149‑1 (MQ=255)                                                                       cgGGGTCATAGGTGAGATGGAACGGCAGCGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCTCAGGGTGGCGGCAGGCGGCAGGGCAATGCGCTGc                                                                           <  5:286169/149‑1 (MQ=255)                                                                          ggTCATAGGTGAGATGGAACGGCAGCGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCTCAGGGTGGCGGCAGGCGGCAGGGCAATGCGCTGCAgg                                                                        <  5:101583/149‑1 (MQ=255)                                                                              aTAGGTGAGATGGAACGGCAGCGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCTCAGGGTGGCGGCAGGCGGCAGGGCAATGCGCTGCAGGttg                                                                     >  6:72490/1‑146 (MQ=255)                                                                                      gaTGGAACGGCAGCGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCTCAGGGTGGCGGCAGGCGGCAGGGCAATGCGCTGCAGGTAGAAGACTTCa                                                            >  2:408899/1‑149 (MQ=255)                                                                                        tGGAACGGCAGCGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCTCAGGGTGGCGGCAGGCGGCAGGGCAATGCGCTGCAGGTAGAAGACTTCA‑cc                                                         <  4:78730/149‑1 (MQ=255)                                                                                         ggAACGGCAGCGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCTCAGGGTGGCGGCAGGCGGCAGGGCAATGCGCTGCAGGTAGAAGACTTCA‑CCg                                                        >  7:263300/1‑149 (MQ=255)                                                                                           aaCGGCAGCGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCTCAGGGTGGCGGCAGGCGGCAGGGCAATGCGCTGCAGGTAGAAGACTTCA‑CCGTc                                                      >  2:282387/1‑149 (MQ=255)                                                                                             cGGCAGCGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCTCAGGGTGGCGGCAGGCGGCAGGGCAATGCGCTGCAGGTAGAAGACTTCA‑CCGTc                                                      >  8:374789/1‑147 (MQ=255)                                                                                              ggCAGCGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCTCAGGGTGGCGGCAGGCGGCAGGGCAATGCGCTGCAGGTAGAAGACTTCA‑CCGTCCAg                                                   <  6:191156/149‑1 (MQ=255)                                                                                                   cGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCt                                                                                                             <  5:233238/87‑1 (MQ=255)                                                                                                   cGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCt                                                                                                             >  6:233238/1‑87 (MQ=255)                                                                                                      gcccctgccgtgaccctggcgcgccaggccggcccggtcaaaggcaGGGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCTCAGGGTGGCGGCAGGCGGCAGGGCAATGCGCTGCAGGTAGAAGACTTCA‑CCGTCCAGGCTGGCCt                                           >  8:347672‑M2/47‑149 (MQ=255)                                                                                                        ccctgccgtgaccctggcgcgccaggccggcccggtcaaaggcaGGGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCTCAGGGTGGCGGCAGGCGGCAGGGCAATGCGCTGCAGGTAGAAGACTTCA‑CCGTCCAGGCTGGCCTgg                                         >  7:62522‑M2/45‑149 (MQ=255)                                                                                                            gccgtgaccctggcgcgccaggccggcccggtcaaaggcaGGGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCTCAGGGTGGCGGCAGGCGGCAGGGCAATGCGCTGCAGGTagaa                                                                   <  2:313042‑M2/80‑1 (MQ=255)                                                                                                            gccgtgaccctggcgcgccaggccggcccggtcaaaggcaGGGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCTCAGGGTGGCGGCAGGCGGCAGGGCAATGCGCTGCAGGTagaa                                                                   >  1:313042‑M2/41‑120 (MQ=255)                                                                                                            GCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCTCAGGGTGGCGGCAGGCGGCAGGGCAATGCGCTGCAGGTAGAAGACTTCA‑CCGTCCAGGCCAGcctggacg                                      >  2:223653‑M1/1‑145 (MQ=255)                                                                                                              CTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGTCCATCAGCGCCACATCCTGCAGTTCCACGCTCAGGGTGGCGGCAGGCGGCAGGGCAATGCGCTGCAGGTAGAAGACTTCA‑CCGTCCAGGCTGGGCGGGTTGGGt                                   <  5:204520‑M1/149‑1 (MQ=255)                                                                                                              CTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCTCAgg                                                                                                         >  1:399246‑M1/1‑80 (MQ=255)                                                                                                               tttGACCGGGCCGGCCTGGCTCGCCAGGGTGACGGCAGTGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCTCATGGTGGCGGCAGGCGGCAGGGCAATGCGCTGGAGGTAGAAGACTTCA‑CCGTCCAGGCTTGCCTGGTtgggtg                                  <  4:37743/149‑1 (MQ=255)                                                                                                                 tGACCGGGCCGGCCTGGCGCGCCAGGGGCACGGCAGGGGCGTCCAGCAGCGACAGATCCTGCAGTTCCACGCTCAGGGTGGCGGCAGGCGGCAGGGCAATGCGCTGCAGGTAGTAGACTTCA‑CCGTCCAGGCTGGCCTGGTtgggtg                                  <  3:278102/147‑1 (MQ=255)                                                                                                                        gccggccTGGCGCGCCAGGGTCACGGCAGGGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCTCAGGGTGGCGGCAGGCGGCATGGCAATGCGCTGCAGGTAGAAGACTTCA‑CCGTCCATGCTGGCCTGGTTGGGTGGGGTTTGGc                         <  5:173428/149‑1 (MQ=255)                                                                                                                          cggccTGGCGCGCCAGGGTCACGGCAGGGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCTCAGGGTGGCGGCAGGCGGCAGGGCAATGCGCTGCAGGTAGAAGACTTCA‑CCGTCCAGGCTGGCCTGGTTGGGTGGGGTTTGGCTg                       <  1:408899/149‑1 (MQ=255)                                                                                                                                 gccggcccggtcaaaggcaGGGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCTCAGGGTGGCGGCAGGCGGCAGGGCAATGCGCTGCAGGTAGAAGACTTCA‑CCGTCCAGGCTGGCCTGGTTGGGTGGGGTTTGGCTGGAGCAgg                <  7:347672‑M2/130‑1 (MQ=255)                                                                                                                                    cgcCAGGGTCACGGCAGGGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCTCAGGGTGGCGGCAGGCGGCAGGGCAATGCGCTGCAGGTAGAAGACTTCACCCGTCCAGGCTGGCCTGGTTGGGTGGGGTTTGGCTGGAGCAGGCt              <  1:282387/149‑1 (MQ=255)                                                                                                                                        aGGGTCACGGCAGGGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCTCAGGGTGGCGGCAGGCGGCAGGGCAATGCGCTGCAGGTAGAAGACTTCA‑CCGTCCAGGCTGGCCTGGTTGGGTGGGGTTTGGCTGGAGCAGGCTGCAAg         <  7:374789/149‑1 (MQ=255)                                                                                                                                              aCGGCAGGGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCTCAGGGTGGCGGCAGGCGGCAGGGCAATGCGCTGCAGGTAGAAGACTTCA‑CCGTCCAGGCTGGCCTGGTTGGGTGGGGTTTGGCTGGAGCAGGCTGCAAGCAggg    <  8:263300/148‑1 (MQ=255)                                                                                                                                               cGGCAGGGGCGTCCATCAGCGACACATGCTGCAGTTCCACGCTCAGTGTGGCGGCAGGCGGCAGGGCAATGCGCTGCAGGTAGAAGACTTCA‑CCGTCCAGGCTGGCCTGGTTGGGTGGGGTTTGGCTGGAGCAGGCTGCAAGCAGGGAt  <  7:272038/149‑1 (MQ=255)                                                                                                                                                ggcaGGGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCTCAGGGTGGCGTCAGGCGGCAGGTCAATGCGCTGCAGGTAGAAGACTTCa                                                            <  7:241819‑M2/87‑1 (MQ=255)                                                                                                                                                ggcaGGGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCTAAGGGTGGCGGCAGGCGGCAGGGCAATGCGCTGCAGGTAGAAGACTTCa                                                            >  8:241819‑M2/5‑91 (MQ=255)                                                                                                                                                    |                                                                                                                                                 TGAACAGCAACTTGCCATTCAGCTCAATGCGCGCACTTACCGCATAGCGGTGGC‑CAGGCTTGACCTGCGCGGGGTCATAGGTGAGATGGAACGGCAGCGGCACGTTGCCTTTGACCGGGCCGGCCTGGCGCGCCAGGGTCACGGCAGGGGCGTCCATCAGCGACACATCCTGCAGTTCCACGCTCAGGGTGGCGGCAGGCGGCAGGGCAATGCGCTGCAGGTAGAAGACTTCA‑CCGTCCAGGCTGGCCTGGTTGGGTGGGGTTTGGCTGGAGCAGGCTGCAAGCAGGGAT  >  NC_002947/1725282‑1725571

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.