New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2403799 =	44 (0.680)	4 (0.070)	4/244	NT	8.3%	coding (426/1209 nt)	PP_2106	ammonium transporter
	?	NC_002947	2403860 =	48 (0.800)					coding (487/1209 nt)	PP_2106	ammonium transporter

CATTGCCGAGCGGGCGCGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGTTTGGTGGCTTTTGCGCCATCGAGCATTCCCTTTCTGGCGCTGGGC  >  NC_002947/2403712‑2404006                                                                                                                                                      |                                                                                                                                                   ccgcccacggcgcgcgcccagcaacagcaccgccgccagcgccagccagccccccatggcgtgtaccaccacagacccggcaaagtcGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACg                                                                                                                                                    >  5:190592‑M1/88‑149 (MQ=255)      ccGAGCGGGCGCGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACttt                                                                                                                                               >  5:266424/1‑149 (MQ=255)      ccGAGCGGGCGCGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACttt                                                                                                                                               >  8:119393/1‑149 (MQ=255)         aGCGGGCGCGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGcc                                                                                                                                            >  3:64335/1‑149 (MQ=255)               cgcgGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCt                                                                                                                                      <  6:266424/149‑1 (MQ=255)                gcgGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCtg                                                                                                                                     >  2:222591/1‑149 (MQ=255)                        tGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTC‑GGCGCCCCGTTCCACGACTTTGCCGGGTCTGTGGTGGTa                                                                                                                             >  6:208015/1‑149 (MQ=255)                          ccGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTaca                                                                                                                           >  4:47961/1‑149 (MQ=255)                          ccGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTaca                                                                                                                           >  3:31193/1‑149 (MQ=255)                           cGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTgtgg                                                                                                                                  >  5:316181/1‑141 (MQ=255)                           cGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTgtgg                                                                                                                                  <  6:316181/141‑1 (MQ=255)                                      gcTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATgggggg                                                                                                               >  6:305788/1‑149 (MQ=255)                                              gTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCATGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGgctggctg                                                                                                        <  1:116241/149‑1 (MQ=255)                                               ttGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCATGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCtggctggc                                                                                                      >  1:85264/1‑149 (MQ=255)                                               ttGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCtggctggc                                                                                                      <  3:153145/149‑1 (MQ=255)                                                      tGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGctggcgctggcg                                                                                               >  5:396023/1‑149 (MQ=255)                                                       ggCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTggcgg                                                                                              >  3:235776/1‑149 (MQ=255)                                                        gCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTggcgg                                                                                              <  3:47961/148‑1 (MQ=255)                                                             cGTCTATCCGTTCTTCGAGGGTGTGGGGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTg                                                                                         <  7:177217/148‑1 (MQ=255)                                                              gTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCt                                                                                       >  2:373543/1‑149 (MQ=255)                                                                   tCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGc                                                                                  >  4:161573/1‑149 (MQ=255)                                                                     cGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTg                                                                                >  4:91744/1‑149 (MQ=255)                                                                     cGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACACTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTg                                                                                >  2:35596/1‑149 (MQ=255)                                                                      gTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATggg                                                                                                                  >  2:318483/1‑114 (MQ=255)                                                                      gTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATggg                                                                                                                  <  1:318483/114‑1 (MQ=255)                                                                      gTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTgg                                                                               >  1:362767/1‑149 (MQ=255)                                                                      gTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTgg                                                                               <  1:222591/149‑1 (MQ=255)                                                                            cGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACACTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGgcgc                                                                           <  1:35596/147‑1 (MQ=255)                                                                             gAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGgcgcgc                                                                         <  3:91744/148‑1 (MQ=255)                                                                                ggtgtggtgtGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCg                                                                     >  5:195834/1‑149 (MQ=255)                                                                                    tggtgtggAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGACGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTggg                                                                 >  1:327705/1‑149 (MQ=255)                                                                                      gtgtggAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGc                                                                <  3:315617/148‑1 (MQ=255)                                                                                        cgtggaacggtgcgccgaagcgtgcctgcagccaagcctgtaggcccagattaccgttccacGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCgg                                                              >  5:190592‑M2/63‑149 (MQ=255)                                                                                         gtggaacggtgcgccgaagcgtgcctgcagccaagcctgtaggcccagattaccgttccacGACTTTGCCGGGTCTGTGGTGGTACACGCCATCGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGAGGGCgg                                                              >  5:247672‑M2/62‑148 (MQ=255)                                                                                          tggaacggtgcgccgaagcgtgcctgcagccaagcctgtaggcccagattaccgttccacGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTa                                                            >  8:13240‑M2/61‑149 (MQ=255)                                                                                           GAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTAcc                                                          <  1:141268‑M1/149‑1 (MQ=255)                                                                                                 TAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTACCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATg                                                    >  4:235776‑M1/1‑149 (MQ=255)                                                                                                    cgatctccTACACGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATgg                                                   <  7:256696/141‑1 (MQ=255)                                                                                                     cTGGGCCTACAGGCTTGGCTGCAGGCATGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTAGACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGc                                                 <  2:85264/148‑1 (MQ=255)                                                                                                      tGGGCCTACAGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTggg                                                                              <  2:149332/118‑1 (MQ=255)                                                                                                      tGGGCCTACAGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTggg                                                                              >  1:149332/1‑118 (MQ=255)                                                                                                         aagcgtgcctgcagccaagcctgtaggcccagattaccgttccacGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGttt                                             <  6:190592‑M2/104‑1 (MQ=255)                                                                                                           cTACAGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTCCCGCGAtcc                                                   >  8:256696/1‑138 (MQ=255)                                                                                                           cTACAGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGTTtggt                                          <  6:396023/149‑1 (MQ=255)                                                                                                             aCAGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGTTtggtgg                                        >  5:310929/1‑149 (MQ=255)                                                                                                               aGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATgggggg                                                                                                               >  8:245226/1‑76 (MQ=255)                                                                                                               aGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATgggggg                                                                                                               <  7:245226/76‑1 (MQ=255)                                                                                                                 gCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCACGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGTTTGGTGGCttt                                    >  8:347318/1‑149 (MQ=255)                                                                                                                  cTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCACGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGTTTGGTGGCtttt                                   <  7:347318/149‑1 (MQ=255)                                                                                                                    tGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGTTTGGTGGCTTTTgc                                 <  5:305788/149‑1 (MQ=255)                                                                                                                    tGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGGCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGTTTGGTGGCTTTTgc                                 <  4:64335/149‑1 (MQ=255)                                                                                                                           aGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGTTTGGTGGCTTTTGCGCCATc                           >  4:332435/1‑148 (MQ=255)                                                                                                                            ggCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGTTTGGTGGCTTTTGCGCCATCGa                         <  4:214394/149‑1 (MQ=255)                                                                                                                             gCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGTTTGGTGGCTTTTGCGCCATCGAg                        <  3:161573/149‑1 (MQ=255)                                                                                                                                   ttC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGTTTGGTGGCTTTTGCGCCATCGAGCATTcc                  >  1:254486/1‑149 (MQ=255)                                                                                                                                                ttccacGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGTTTGGTGGCTTTTGCGCCATCGAGCATTCCCTTTCTGGCGCt      <  4:31193‑M2/143‑1 (MQ=255)                                                                                                                                                   cacGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGTTTGGTGGCTTTTGCGCCATCGAGCATTCCCTTTCTGGCGCTggg   <  2:141268‑M2/146‑1 (MQ=255)                                                                                                                                                    acGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGTTTGGTGGCTTTTGCGCCATCGAGCATTCCCTTTCTGGCGCTGGGc  >  7:96222‑M2/3‑149 (MQ=255)                                                                                                                                                     cGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGTTTGGTGGCTTTTGCGCCATCGAGCATTCCCTTTc             <  8:12717‑M2/136‑1 (MQ=255)                                                                                                                                                     cGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGTTTGGTGGCTTTTGCGCCATCGAGCATTCCCTTTc             >  7:12717‑M2/2‑137 (MQ=255)                                                                                                                                                      |                                                                                                                                                   CATTGCCGAGCGGGCGCGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTC‑GGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGTTTGGTGGCTTTTGCGCCATCGAGCATTCCCTTTCTGGCGCTGGGC  >  NC_002947/2403712‑2404006

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.