New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2665181 = | 53 (0.810) | 3 (0.050) | 3/250 | NT | 6.2% | coding (1044/2589 nt) | acnA‑II | aconitate hydratase |
? | NC_002947 | 2665218 = | 41 (0.670) | coding (1081/2589 nt) | acnA‑II | aconitate hydratase |
CATCGACTACCTGCGCCTGACCGGCCGTGAAGAGCAGCAGGTCAAGCTTGTGGAAACCTACGCCAAGGCCACCGGCCTGTGGGCTGACAGCCTGGGCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGACCTGGCGGCCAAAGGCATCGCCGGCAGCTGGGAAGAGGTGCCGGGGCAGATGCCGGACGGCGCGGTGATCATCGCTGCCATCACCAGTTGCAC > NC_002947/2665070‑2665357 | cgcgccgtccggcatctgccccggcacctcttcccagctgccggcgatgcctttggccgccaggtcgctggtggcgacgcgggcatgcgggttggacgggccggccatgttGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCa > 3:398391‑M1/112‑149 (MQ=255) tCGACTACCTGCGCCTGACCGGCCGTGAAGAGCAGCAGGTCAAGCTTGTGGAAACCTACGCCAAGGCCACCGGCCTGTGGGCTGACAGCCTGGGCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAAc < 4:48020/149‑1 (MQ=255) gACTACCTGCGCCTGACCGGCCGTGAAGAGCAGCAGGTCAAGCTTGTGGAAACCTACGCCAAGGCCACCGGCCTGTGGGCTGACAGCCTGGGCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACa < 3:41635/148‑1 (MQ=255) ccTGCGCCTGACCGGCCGTGAAGAGCAGCAGGTCAAGCTTGTGGAAACCTACGCCAAGGCCACCGGCCTGTGGGCTGACAGCCTGGGCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATggccg > 1:283255/1‑149 (MQ=255) ccTGCGCCTGACCGGCCGTGAAGAGCAGCAGGTCAAGCTTGTGGAAACCTACGCCAAGGCCACCGGCCTGTGGGCTGACAGCCTGGGCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATggccg > 6:307017/1‑149 (MQ=255) cTGCGCCTGACCGGCCGTGAAGAGCAGCAGGTCAAGCTTGTGGAAACCTACGCCAAGGCCACCGGCCTGTGGGCTGACAGCCTGGGCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATggccgg < 6:360236/149‑1 (MQ=255) gcgcCTGACCGGCCGTGAAGAGCAGCAGGTCAAGCTTGTGGAAACCTACGCCAAGGCCACCGGCCTGTGGGCTGACAGCCTGGGCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATggccggc‑‑c > 2:125602/1‑149 (MQ=255) cgcCTGACCGGCCGTGAAGAGCAGCAGGTCAAGCTTGTGGAAACCTACGCCAAGGCCACCGGCCTGTGGGCTGACAGCCTGGGCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATggccggc < 6:35955/147‑1 (MQ=255) cccggcacctcttcccagctgccggcgatgcctttggccgccaggtcgctggtggcgacgcgggcatgcgggttggacgggccggccatgttGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATggcc > 4:84286‑M1/93‑138 (MQ=255) cccggcacctcttcccagctgccggcgatgcctttggccgccaggtcgctggtggcgacgcgggcatgcgggttggacgggccggccatgttGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATggcc < 3:84286‑M1/46‑1 (MQ=255) ccGGCCGTGAAGAGCAGCAGGTCAAGCTTGTGGAAACCTACGCCAAGGCCACCGGCCTGTGGGCTGACAGCCTGGGCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAAc < 2:283255/149‑1 (MQ=255) ggCCGTGAAGAGCAGCAGGTCAAGCTTGTGGAAACCTACGCCAAGGCCACCGGCCTGTGGGCTGACAGCCTGGGCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAAccc > 1:268785/1‑149 (MQ=255) gCCGTGAAGAGCAGCAGGTCAAGCTTGTGGAAACCTACGCCAAGGCCACCGGCCTGTGGGCTGACAGCCTGGGCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCg > 4:122495/1‑149 (MQ=255) aaGAGCAGCAGGTCAAGCTTGTGGAAACCTACGCCAAGGCCACCGGCCTGTGGGCTGACAGCCTGGGCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGc < 5:63355/148‑1 (MQ=255) agagCAGCAGGTCAAGCTTGTGGAAACCTACGCCAAGGCCACCGGCCTGTGGGCTGACAGCCTGGGCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGccc < 1:266468/149‑1 (MQ=255) gTCAAGCTTGTGGAAACCTACGCCAAGGCCACCGGCCTGTGGGCTGACAGCCTGGGCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACTTGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGccac < 1:72988/149‑1 (MQ=255) gTCAAGCTTGTGGAAACCTACGCCAAGGCCACCGGCCTGTGGGCTGACAGCCTGGGCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTc < 7:174834/125‑1 (MQ=255) gTCAAGCTTGTGGAAACCTACGCCAAGGCCACCGGCCTGTGGGCTGACAGCCTGGGCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTc > 8:174834/1‑125 (MQ=255) gTCAAGCTTGTGGAAACCTACGCCAAGGCCACCGGCCTGTGGGCTGACAGCCTGGGCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGccac > 7:17900/1‑149 (MQ=255) gCTTGTGGAAACCTACGCCAAGGCCACCGGCCTGTGGGCTGACAGCCTGGGCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCg > 3:276274/1‑149 (MQ=255) ttGTGGAAACCTACGCCAAGGCCACCGGCCTGTGGGCTGACAGCCTGGGCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGAc > 1:9680/1‑149 (MQ=255) gtgGAAACCTACGCCAAGGCCACCGGCCTGTGGGCTGACAGCCTGGGCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGAc < 3:114489/147‑1 (MQ=255) ggAAACCTACGCCAAGGCCACCGGCCTGTGGGCTGACAGCCTGGGCAGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGACCTgg < 6:184413/149‑1 (MQ=255) gAAACCTACGCCAAGGCCACCGGCCTGTGGGCTGACAGCCTGGGCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGACCTggc > 1:302361/1‑149 (MQ=255) aaCCTACGCCAAGGCCACCGGCCTGTGGGCTGACAGCCTGGGCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGACCTggcgg < 8:47575/149‑1 (MQ=255) cTACGCCAAGGCCACCGGCCTGTGGGCTGACAGCCTGGGCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGACCTGGCGGcc > 8:76884/1‑148 (MQ=255) cGCCAAGGCCACCGGCCTGTGGGCTGACAGCCTGGGCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGACCTGGCGGCCaaa < 8:17900/148‑1 (MQ=255) gCCAAGGCCACCGGCCTGTGGGCTGACAGCCTGGGCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGACCTGGCGGCCAAAgg > 6:296815/1‑149 (MQ=255) ccAAGGCCACCGGCCTGTGGGCTGACAGCCTGGGCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGACCTGGCGGCCAAAGGc < 5:296815/149‑1 (MQ=255) cTGTGGGCTGACAGCCTGGGCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGACCTGGCGGCCAAAGGCATCGCCGGCAGCTg < 7:320223/149‑1 (MQ=255) ggCTGACAGCCTGGGCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGACCTGGCGGCCAAAGGCATCGCCGGCAGCTggg > 3:57449/1‑146 (MQ=255) gCTGACAGCCTGGGCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGACCTGGCGGCCAAAGGCATCGCCGGCAGCTGGGaa > 6:109865/1‑147 (MQ=255) cTGACAGCCTGGGCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGACCTGGCGGCCAAAGGCATCGCCGGCAGCTGGGAagag < 3:301222/149‑1 (MQ=255) tGACAGCCTGGGCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGACCTGGCGGCCAAAGGCATCGCCGGCAGCTGGGAAGAgg > 7:90679/1‑149 (MQ=255) aCAGCCTGGGCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTGTTTCCGAAAAATGGCCCTCCTCCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGACCTGGCGGCCAAAGGCATCGCCGGCAGCTGGGAagag < 1:125602/149‑1 (MQ=255) aCAGCCTGGGCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGACCTGGCGGCCAAAGGCATCGCCGGCAGCTGGGAAGAgg < 5:109865/147‑1 (MQ=255) aCAGCCTGGGCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGACCTGGCGGCCAAAGGCATCGCCGGCAGCTGGGAAGAGGt < 4:57449/148‑1 (MQ=255) ccTGGGCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGACCTGGCGGCCAAAGGCATCGCCgg < 2:139900/129‑1 (MQ=255) cTGGGCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGACCTGGCGGCCAAAGGCATCGCCGGCAGCTGGGAAGAGGTGCCggg > 6:116890/1‑149 (MQ=255) gggCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGACCTGGCGGCCAAAGGCATCGCCGGCAGCTGGGAAGAGGTGCCGGGGc < 3:122495/149‑1 (MQ=255) ggccatgttgcgtaccacgctcgacaggtcgaagctcagggtacgcAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGACCTGGCGGCCAAAGGCATCGCCGGCAGCTGGGAAGAGGTGCCggg < 3:84286‑M2/92‑1 (MQ=255) ggccatgttgcgtaccacgctcgacaggtcgaagctcagggtacgcAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGACCTGGCGGCCAAAGGCATCGCCGGCAGCTGGGAAGAGGTGCCggg > 4:84286‑M2/47‑138 (MQ=255) gAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGACCTGGCGACCAAAGGCATCGCCGGCAGCTGGGAAGAGGTGCCGGGGCAGATGCCGGACGgcgc > 5:256274/1‑149 (MQ=255) tgcgtaccacgctcgacaggtcgaagctcagggtacgcAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGACCTGGCGGCCAAAGGCATCGCCGGCAGCTGGGAAGAGGTGCCGGGGCAGATGCCGGACGGcgcg > 3:398391‑M2/39‑149 (MQ=255) CCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGACCTGGCGGCCAAAg < 6:193082‑M1/92‑1 (MQ=255) CCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGACCTGGCGGCCAAAg > 5:193082‑M1/1‑92 (MQ=255) CCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGACCTGGCGGCCAAAGGCATCGCCGGCAGCTGGGAAGAGGTGCCGGGGCAGATGCCGGACGGCGCGGTGATCa < 3:113910‑M1/149‑1 (MQ=255) cTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGACCTGGCGGCCAAAGGCATCGCCGGCAGCTGGGAAGAGGTGCCGGGGCAGATGCCGGACGGCGCGGTGatcat > 6:271946/1‑149 (MQ=255) tGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGACCTGGCGGCCAAAGGCATCGCCGGCAGCTGGGAAGAGGTGCCGGGGCAGATGCCGGACGGCGCGGTGatcatc > 7:138543/1‑149 (MQ=255) aGCTTCGACCTGTCGAGCTTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGACCTGGCGGCCAAAGGCATCGCCGGCAGCTGGGAAGAGGTGCCGGGGCAGATGCCGGACGGCGCGGTGatcatc < 2:9680/147‑1 (MQ=255) cGACCTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGACCTGGCGGCCAAAGGCATCGCCGGCAGCTGGGAAGAGGTGCCGGGGCAGATGCCGGACGGCGCGGTGATCATCGCTGcc < 5:307017/148‑1 (MQ=255) cTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGACCTGGCGGCCAAAGGCATCGCCGGCAGCTGGGAAGAGGTGCCGGGGCAGATGCCGGACGGCGCGGTGATCATCGCTGCCATCAc < 2:268785/149‑1 (MQ=255) aGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGACCTGGCGACCAAAGGCATCGCCGGCAGCTGGGAAGAGGTGCCGGGGCAGATGCCGGACGGCGCGGTGATCATCGCTGCCATCACCAGTTg < 6:256274/149‑1 (MQ=255) gCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGACCTGGCGGCCAAAGGCATCGCCGGCAGCTGGGAAGAGGTGCCGGGGCAGATGCCGGACGGCGCGGTGATCATCGCTGCCATCACCAGTTGc < 8:90679/149‑1 (MQ=255) cGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGGGTCGCCACCAGCGACCTGGCGGCCAAAGGCTTCGCCGGCAGCTGGGAAGAGGTGCCGGTGCAGATGCCGGACGGCGCGGTTATCATCGCTTCCATCACCAGTTGCa < 4:276274/149‑1 (MQ=255) cGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGACCTGGCGGCCAAAGGCATCGCCGGCAGCTGGGAAGAGGTGCCGGGGCAGATGCCGGACGGCGCGGTGATCATCGCTGCCATCACCAGTTGCa < 5:271946/149‑1 (MQ=255) tG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCAGCGTCGCCACCAGCGACCTGGCGGCCAAAGGCATCGCCGGAAGCTGGGAAGAGGTGCCGGGGCAGATGCCGGACGGCGCGGTGATCATAGCTGCCATCACCAGTTGCAc > 7:383480/1‑148 (MQ=255) ggtacgcAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGACCTGGCGGCCAAAGGCATCGCCGGCAGCTGGGAAGAGGTGCCGGGGCAGATGCCGGACGGCGCGGTGATCATCGCTGCCATCACCAGTTGc < 3:325937‑M2/138‑1 (MQ=255) ggtacgcAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGACCTGGCGGCCAAAGGCATCGCCGGCAGCTGGGAAGAGGTGCCGGGGCAGATGCCGGACGGCGCGGTGATCATCGCTGCCATCACCAGTTGc > 4:325937‑M2/8‑145 (MQ=255) | CATCGACTACCTGCGCCTGACCGGCCGTGAAGAGCAGCAGGTCAAGCTTGTGGAAACCTACGCCAAGGCCACCGGCCTGTGGGCTGACAGCCTGGGCGGCGCGGTCTACGAGCGTACCCTGAGCTTCGACCTGTCGAGCGTG‑GTACGCAACATGGCCGGC‑‑CCGTCCAACCCGCATGCCCGCGTCGCCACCAGCGACCTGGCGGCCAAAGGCATCGCCGGCAGCTGGGAAGAGGTGCCGGGGCAGATGCCGGACGGCGCGGTGATCATCGCTGCCATCACCAGTTGCAC > NC_002947/2665070‑2665357 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |