New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4191542 =	53 (0.810)	4 (0.060)	4/250	NT	7.8%	intergenic (‑874/‑283)	PP_5612/PP_5613	hypothetical protein/hypothetical protein
	?	NC_002947	4191584 =	44 (0.710)					intergenic (‑916/‑241)	PP_5612/PP_5613	hypothetical protein/hypothetical protein

CCCCCCCTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGCTACGGTCAACTCAGCGTTCTTCGCACACGAGGATTTCACAAGCCTCCACGACCTAAGCACCTGACAACTCAGGCAAAAAACTGATAACGGTATGCCCGCGCTATACTGATCTC  >  NC_002947/4191438‑4191732                                                                                                                                                    |                                                                                                                                                     cccccccTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCAttt                                                                                                                                                    >  8:268093/1‑149 (MQ=255)   cccccTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTga                                                                                                                                                  <  7:268093/149‑1 (MQ=255)   cccccTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTga                                                                                                                                                  <  6:29743/149‑1 (MQ=255)    ccccTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCAttt                                                                                                                                                    >  4:161618/1‑146 (MQ=255)    ccccTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTga                                                                                                                                                  <  3:161618/148‑1 (MQ=255)     cccTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGCTCTTCATCTTTACCAGCACTCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTgaga                                                                                                                                                <  8:249309/149‑1 (MQ=255)       cTTGGGTCGACCTGCCACTTGCGTCCCCTGCCGCTGATGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGc                                                                                                                                              <  5:235450/149‑1 (MQ=255)        ttGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGc                                                                                                                                              >  7:283667/1‑148 (MQ=255)         gtgcttaggtcgtggaggcttgtgaaatcctcgtgtgcgaagaacgctgagttgaccgtagccagctctcagcttgaggctttgttggctctcaaaTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTga                                                                                                                                                  >  1:329400‑M1/97‑143 (MQ=255)         gtgcttaggtcgtggaggcttgtgaaatcctcgtgtgcgaagaacgctgagttgaccgtagccagctctcagctagaggctttgttggctctcaaaTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTga                                                                                                                                                  <  2:329400‑M1/47‑1 (MQ=255)           ggTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCcaa                                                                                                                                           >  4:75695/1‑148 (MQ=255)                  cTGCCACTTGCGTCCCCTGGCGCTGATGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAGCCCGCCTCATTTGAGAGCCAACAAAGcc                                                                                                                                    <  1:18373/149‑1 (MQ=255)                       aCTTGCGTCCCCTGGCGCTGATGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGagag                                                                                                                                               >  8:54821/1‑132 (MQ=255)                       aCTTGCGTCCCCTGGCGCTGATGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGagag                                                                                                                                               <  7:54821/132‑1 (MQ=255)                           gCGTCCCCTGGCGCTGATGCTCTTCATGTTTACCAGCACGCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAATTCTGAGGCGTTAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCCAACAAAGCCTCTAGCt                                                                                                                             <  2:155481/146‑1 (MQ=255)                           gCGTCCCCTGGCGCTGATGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCCAACAAAGCCTCTAGCTga                                                                                                                           <  4:72769/148‑1 (MQ=255)                           gCGTCCCCTGGCGCTGATGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCCAACAAAGCCTCTAGCTga                                                                                                                           <  1:109386/148‑1 (MQ=255)                           gCGTCCCCTGGCGCTGATGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCACCTCATTTGAGAGCCAACAAAGCCTCTAGCTga                                                                                                                           <  3:27529/148‑1 (MQ=255)                            ttgtgaaatcctcgtgtgcgaagaacgctgagttgaccgtagccagctctcagctagaggctttgttggctctcaaaTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGagag                                                                                                                                               >  5:306615‑M1/78‑127 (MQ=255)                            ttgtgaaatcctcgtgtgcgaagaacgctgagttgaccgtagccagctctcagctagaggctttgttggctctcaaaTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGagag                                                                                                                                               <  6:306615‑M1/50‑1 (MQ=255)                               ccccTGGCGCTGATGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCt                                                                                                                      >  4:221412/1‑149 (MQ=255)                                  cTGGCGCTGATGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGc                                                                                                                   <  3:386838/149‑1 (MQ=255)                                    ggCGCTGATGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCCAACaaa                                                                                                                                       <  4:160121/127‑1 (MQ=255)                                    ggCGCTGATGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCCAACaaa                                                                                                                                       >  3:160121/1‑127 (MQ=255)                                      cgcTGATGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGCTACg                                                                                                               <  1:188493/149‑1 (MQ=255)                                       gcTGATGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGCTACgg                                                                                                              >  8:868/1‑149 (MQ=255)                                           aTGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGc                                                                                                                                              <  3:298791/113‑1 (MQ=255)                                           aTGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGc                                                                                                                                              >  4:298791/1‑113 (MQ=255)                                           aTGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGCTACGGTc                                                                                                            <  4:357174/147‑1 (MQ=255)                                                    aTCTTTACCAGCACGCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGCTACGGTCAACTCAGCGtt                                                                                                 <  8:283667/149‑1 (MQ=255)                                                           ccAGCACGCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGCTACGGTCAACTCAGCGTTCTTCGca                                                                                          <  1:47615/149‑1 (MQ=255)                                                                aCGCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGCTACGGTCAACTCAGCGTTCTTCGCACACGa                                                                                     <  3:75695/149‑1 (MQ=255)                                                                    ccAAAGTCCTCTGTCAAACCTACGAACGCCGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGCTACGGTCAACTCAGCGTTCTTCGCACACGAGGAt                                                                                 <  4:113737/149‑1 (MQ=255)                                                                    ccAAAGTCCTCTGTCAAACCTACGAACGCCGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGCTACGGTCAACTCAGCGTTCTTCGCACACGAGGAt                                                                                 >  1:332528/1‑149 (MQ=255)                                                                           ccTCTGTCAAACCTACGAACGCCGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGCTACGGTCAACTCAGCGTACTTCGCACACGAGGATTTcac                                                                            >  6:68634/1‑147 (MQ=255)                                                                              ctGTCAAACCTACGAACGCCGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGCTACGGTCAACTCAGCGTTCTTCGCACACGAGGATTTCACAAGcc                                                                       >  5:262581/1‑149 (MQ=255)                                                                                   aaaCCTACGAACGCCGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGCTACGGTCAACTCAGCGTTCTTCGCACACGAGGATTTCACAAGCCTCCAc                                                                  >  8:292163/1‑149 (MQ=255)                                                                                       cTACGAACGCCGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGCTACGGTCAACTCAGCGTTCTTCGCACACGAGGATTTCACAAGCCTCCACGAcc                                                              >  8:367491/1‑149 (MQ=255)                                                                                          cGAACGCCGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGCTACGGTCAACTCAGCGTTCTTCGCACACGAGGATTTCACAAGCCTCCACGACCt                                                             <  2:49338/147‑1 (MQ=255)                                                                                                 cGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGCTACGGTCAACTCAGCGTTCTTCGCACACGAGGATTTCACAAGCCTCCACGACCTAAGCActt                                                     >  1:188812/1‑146 (MQ=255)                                                                                                 cGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGCTACGGTCAACTCAGCGTTCATCGCACACGAGGATTTCACAAGCCTCCACGACCTAAGCACCt                                                     >  1:157644/1‑148 (MQ=255)                                                                                                  ctctcaaatgaggcggcttcacttggcagccaggaagccttcacgcctcaTTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGCTACGGTCAACTCAGCGTTCTTCGCACACGAGGATTTCACaa                                                                          >  5:306615‑M2/51‑127 (MQ=255)                                                                                                  ctctcaaatgaggcggcttcacttggcagccaggaagccttcacgcctcaTTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGCTACGGTCAACTCAGCGTTCTTCGCACACGAGGATTTCACaa                                                                          <  6:306615‑M2/77‑1 (MQ=255)                                                                                                     tcaaatgaggcggcttcacttggcagccaggaagccttcacgcctcaTTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGCTACGGTCAACTCAGCGTTCTTCGCACACGAGGATTTCACAAGCCTCCACGACCTAAGCAc                                                       <  2:329400‑M2/96‑1 (MQ=255)                                                                                                     tcaaatgaggcggcttcacttggcagccaggaagccttcacgcctcaTTTGAGAGCCAACAAAGCCTCAAGCTGAGAGCTGGCTACGGTCAACTCAGCGTTCTTCGCACACGAGGATTTCACAAGCCTCCACGACCTAAGCAc                                                       >  1:329400‑M2/48‑143 (MQ=255)                                                                                                        cTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGCTACGGTCAACTCAGCGTTCTTCGCACACGAGGATTTCACAAGCCTCCACGACCTAAGCACCTGACAACTc                                             <  7:868/149‑1 (MQ=255)                                                                                                        cTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGCTACGGTCAACTCAGCGTTCTTCGCACACGAGGATTTCACAAGCCTCCACGACCTAAGCACCTGACAACTc                                             <  3:221412/149‑1 (MQ=255)                                                                                                           AGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGCTACGGTCAACTCAGCGTTCTTCGCACACGAGGATTTCACAAGCCTCCACGACCTAAGCACTTGACAACTCa                                            >  2:188812‑M1/1‑147 (MQ=255)                                                                                                                tGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGCTACGGTCAACTCAGCGTTCTTCGCACACGAGGATTTCACAAGCCTCCACGACCTaa                                                           <  7:238126/127‑1 (MQ=255)                                                                                                                tGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGCTACGGTCAACTCAGCGTTCTTCGCACACGAGGATTTCACAAGCCTCCACGACCTaa                                                           >  8:238126/1‑127 (MQ=255)                                                                                                                tGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGCTACGGTCAACTCAGCGTTCTTCGCACACGAGGATTTCACAAGCCTCCACGACCTAAGCACCTGACAACTCAGGCaaa                                      >  1:210279/1‑148 (MQ=255)                                                                                                                    ggCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGCTACGGTCAACTCAGCGTTCTTCGCACACGAGGATTTCACAAGCCTCCACGACCTAAGCACCTGACAACTCAGGCAAAAAACt                                 <  2:332528/149‑1 (MQ=255)                                                                                                                      cTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGCTACGGTCAACTCAGCGTTCTTCGCACACGAGGATTTCACAAGCCTCCACGACCTAAGCACCTGACAACTCAGGCAAAAAACTGa                               <  6:262581/149‑1 (MQ=255)                                                                                                                       ttCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGCTACGGTCAACTCAGCGTTCTTCGCACACGAGGATTTCACAAGCCTcc                                                                    <  6:80218/111‑1 (MQ=255)                                                                                                                       ttCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGCTACGGTCAACTCAGCGTTCTTCGCACACGAGGATTTCACAAGCCTcc                                                                    >  5:80218/1‑111 (MQ=255)                                                                                                                           tGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGCTACGCTCAACTCAGCGTTCTTCGCACACGAGGATTTCACAAGCCTCCACGACCTAAGCACCTGACAACTCAGGCAAAAAACTGATAACg                          >  2:386554/1‑149 (MQ=255)                                                                                                                             gCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCCAACAAAGCCTCTAGCTGAGTGCTGGCTACGGTCAACTCAGCGTTCTTCGCACACGAGGATTTCACAAGCCTCCACGACCTAAGCACCTGACAACTCAGGCAAAAAACTGATAACgg                         >  1:362763/1‑148 (MQ=255)                                                                                                                              cTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGCTACGGTCAACTCAGCGTTCTTCGCACACGAGGATTTCACAAGCCTCCACGACCTAAGCACCTGACAACTCAGGCAAAAAACTGATAACGGTa                       <  2:210279/149‑1 (MQ=255)                                                                                                                                          g‑ccgccTCATTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGCTACGGTCAACTCAGCGTTCTTCGCACACGAGGATTTCACAAGCCTCCACGACCTAAGCACCt                                                     >  1:299328/1‑107 (MQ=255)                                                                                                                                          g‑ccgccTCATTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGCTACGGTCAACTCAGCGTTCTTCGCACACGAGGATTTCACAAGCCTCCACGACCTAAGCACCt                                                     <  2:299328/107‑1 (MQ=255)                                                                                                                                             cgcctcaTTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGCTACGGTCAACTCAGCGTTCTTCGCACACGAGGATTTCACAAGCCTCCACGACCTAAGCACCTGACAACTCAGGCAAAAAACTGATAACGGTATGCCCGCGCTATAc         <  1:346795‑M2/142‑1 (MQ=255)                                                                                                                                             cgcctcaTTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGCTACGGTCAACTCAGCGTTCATCGCACACGAGGATTTCACAAGCCTCCACGACCTAAGCACCTGACAACTCAGGCAAAAAACTGATAACGGTATGCCCGCGCTATAc         <  2:157644‑M2/142‑1 (MQ=255)                                                                                                                                                   aTTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGCTACGGTCAACTCAGCGTTCTTCGCACACGAGGATTTCACAAGCCTCCACGACCTAAGCACCTGACAACTCAGGCAAAAAACTGATAACGGTATGCCCGCGCTATACTGAt     <  7:367491‑M2/146‑1 (MQ=255)                                                                                                                                                    tttGAGAGCCAACAAAGCCTCTAGCTGAGTGCTGGCTACGGTCAACTCAGCGTTCTTCGCACACGAGGATTTCACAAGCCTCCACGACCTAAGCACCTGACAACTCAGGCAAAAAACTGATAACGGTATGCCCGCGCTATACTGAtctc  <  2:362763/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                     CCCCCCCTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAATGCTGAGGCGTGAAGGCTTCCTGGCTGCCAAGTGAAG‑CCGCCTCATTTGAGAGCCAACAAAGCCTCTAGCTGAGAGCTGGCTACGGTCAACTCAGCGTTCTTCGCACACGAGGATTTCACAAGCCTCCACGACCTAAGCACCTGACAACTCAGGCAAAAAACTGATAACGGTATGCCCGCGCTATACTGATCTC  >  NC_002947/4191438‑4191732

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.