New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 442437342 (0.650)6 (0.100) 5/250 NT 11.7% coding (286/393 nt) PP_3916 hypothetical protein
?NC_002947 = 4424397 51 (0.830)coding (310/393 nt) PP_3916 hypothetical protein

CAAGCGCTTCAACCCGTGGGAAGACTGGGCGGTTGGCGGGCCGATCATGCAGAAGCACAACGTCAGCCTGCACTGCCCGCAGCCAGAGTGGGACTACTGGGCAGCCTGGATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCGGCGATACCGTCCAGGTGCCGAAGGAGCTGATGCCATGACCGTGATCCTTCCCCTCGCCTACATGGCCTACCTGATCTACAGGGGGCTTCTCGGTGAG  >  NC_002947/4424249‑4424539
                                                                                                                                                    |                                                                                                                                              
cAAGCGCTTCAACCCGTGGGAAGACTGGGCGGTTGGCGGGCCGATCATGCAGAAGCACAACGTCAGCCTGCACTGCCCGCAGCCAGAGTGGGACTACTGGGCAGCCTGGATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATc                                                                                                                                                <  5:314976/149‑1 (MQ=255)
   gcgcTTCAACCCGTGGGAAGACTGGGCGGTTGGCGGGCCGATCATGCAGAAGCACAACGTCAGCCTGCACTGCCCGCAGCCAGAGTGGGACTACTGGGCAGCCTGGATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCtgc                                                                                                                                             <  7:6473‑M2/149‑4 (MQ=255)
       ttCAACCCGTGGGAAGACTGGGCGGTTGGCGGGCCGATCATGCAGAAGAACAACGTCAGCATGCACTGCCCGCAGCCAGAGTGGGACTACTGGGCAGCCTGGATAACCGATAACGGCAAGGACGTCGCCAAGGGCGCTGATCtgccgtt                                                                                                                                         <  3:153498‑M2/149‑8 (MQ=255)
           aCCCGTGGGAAGACTGGGCGGTTGGCGGGCCGATCATGCAGAAGCACAACGTCAGCCTGCACTGCCCGCAGCCAGAGTGGGACTACTGGGCAGCCTGGATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCcg                                                                                                                                     <  3:389795/149‑1 (MQ=255)
                tGGGAAGACTGGGCGGTTGGCGGGCCGATCATGCAGAAGCACAACGTCAGCCTGCACTGCCCGCAGCCAGAGTGGGACTACTGGGCAGCCTGGATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCggcggc                                                                                                                                <  8:83833/149‑1 (MQ=255)
                   gAAGACTGGGCGGTTGGCGGGCCGATCATGCAGAAGCACAACGTCAGCCTGCACTGCCCGCAGCCAGAGTGGGACTACTGGGCAGCCTGGATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTg                                                                                                                             >  3:286097/1‑149 (MQ=255)
                   gAAGACTGGGCGGTTGGCGGGCCGATCATGCAGAAGCACAACGTCAGCCTGCACTGCCCGCAGCCAGAGTGGGACTACTGGGCAGCCTGGATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTg                                                                                                                             >  4:209817/1‑149 (MQ=255)
                   gAAGACTGGGCGGTTGGCGGGCCGATCATGCAGAAGCACAACGTCAGCCTGCACTGCCCGCAGCCAGAGTGGGACTACTGGGCAGCCTGGATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTg                                                                                                                             <  3:153802/149‑1 (MQ=255)
                    aaGACTGGGCGGTTGGCGGGCCGATCATGCAGAAGCACAACGTCAGCCTGCACTGCCCGCAGCCAGAGTGGGACTACTGGGCAGCCTGGATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGc                                                                                                                            <  5:68258/149‑1 (MQ=255)
                       aCTGGGCGGTTGGCGGGCCGATCATGCAGAAGCACAACGTCAGCCTGCACTGCCCGCCGCCAGAGTGGGACTACTGGGCAGCCTGGATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCTCCCGTTGCCGGCGGCGTGCCgg                                                                                                                         >  3:36563/1‑149 (MQ=255)
                       aCTGGGCGGTTGGCGGGCCGATCATGCAGAAGCACAACGTCAGCCTGCACTGCCCGCAGCCAGAGTGGGACTACTGGGCAGCCTGGATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCgg                                                                                                                         >  7:183182/1‑149 (MQ=255)
                           gtcGGTTGGCGGGCCGATCATGCAGAAGCACAACGTCAGCCTGCACTGCCCGCAGCCAGAGTGGGACTACTGGGCAGCCTGGATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGcc                                                                                                                      <  6:217781/146‑1 (MQ=255)
                                  ggCGGGCCGATCATGCAGAATCACAACGTCAGCCTGCACTGCCCGCAGCCAGAGTGTGACTACTGGGCAGCCTGGATAACCTATAACGGCAAGGACGTCTCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATATTCg                                                                                                               <  4:153498/148‑1 (MQ=255)
                                           aTCATGCAGAAGCACAACGTCAGCCTGCACTGCCCGCAGCCAGAGTGGGACTACTGGGCAGCCTGGATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCt                                                                                                     >  3:350325/1‑149 (MQ=255)
                                              aTGCAGAAGCACAACGTCAGCCTGCACTGCCCGCAGCCAGAGTGGGACTACTGGGCAGCCTGGATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCg                                                                                                   <  8:320187/148‑1 (MQ=255)
                                                  aGAAGCACAACGTCAGCCTGCACTGCCCGCAGCCAGAGTGGGACTACTGGGCAGCCTGGATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCtgccg                                                                                                                                           <  3:397273‑M2/104‑6 (MQ=255)
                                                  aGAAGCACAACGTCAGCCTGCACTGCCCGCAGCCAGAGTGGGACTACTGGGCAGCCTGGATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCtgccg                                                                                                                                           >  4:397273‑M2/1‑99 (MQ=255)
                                                   gAAGCACAACGTCAGCCTGCACTGCCCGCAGCCAGAGTGGGACTACTGGGCAGCCTGGATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCGGCGATa                                                                                             <  2:148929/149‑1 (MQ=255)
                                                        acaACGTCAGCCTGCACTGCCCGCAGCCAGAGTGGGACTACTGGGCAGCCTGGATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCcca                                                                                                           <  1:281329/130‑1 (MQ=255)
                                                        acaACGTCAGCCTGCACTGCCCGCAGCCAGAGTGGGACTACTGGGCAGCCTGGATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCcca                                                                                                           >  2:281329/1‑130 (MQ=255)
                                                         caACGTCAGCCTGCACTGCCCGCAGCCAGAGTGGGACTACTGGGCAGCCTGGATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCGGCGATACCGTc                                                                                        >  5:172934/1‑148 (MQ=255)
                                                                aGCCTGCACTGCCCGCAGCCAGAGTGGGACTACTGGGCAGCCTGGATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCGGCGATACCGTCCAGGTGc                                                                                 <  6:172934/148‑1 (MQ=255)
                                                                  ccTGCACTGCCCGCAGCCAGAGTGGGACTACTGGGCAGCCTGGATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCGGCGATACCGTCCAGGTGCCg                                                                               <  1:348419/148‑1 (MQ=255)
                                                                  ccTGCACTGCCCGCAGCCAGAGTGGGACTACTGGGCAGCCTGGATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCGGCGATACCGTCCAGGTGCCg                                                                               >  8:14540/1‑148 (MQ=255)
                                                                      cACTGCCCGCAGCCAGAGTGGGACTACTGGGCAGCCTGGATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCGGCGATACCGTCCAGGTGCCGAAg                                                                            <  3:209817/147‑1 (MQ=255)
                                                                      cACTGCCCGCAGCCAGAGTGGGACTACTGGGCAGCCTGGATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCGGCGATACCGTCCAGGTGCCAAAGGa                                                                          <  7:231663/149‑1 (MQ=255)
                                                                            ccGCAGCCAGAGTGGGACTACTGGGCAGCCTGGATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCGGCGATACCGTCCAGGTGCCGAAGGAGCTGAt                                                                    <  7:14540/149‑1 (MQ=255)
                                                                            ccGCAGCCAGAGTGGGACTACTGGGCAGCCTGGATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCGGCGATACCGTCCAGGTGCCGAAGCAGCTGAt                                                                    >  2:215921/1‑149 (MQ=255)
                                                                             cGCAGCCAGAGTGGGACTACTGGGCAGCCTGGATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCGGCGATACCGTCCAGGTGCCGAAGGAGCTGATg                                                                   >  1:172072/1‑149 (MQ=255)
                                                                                   cAGAGTGGGACTACTGGGCAGCCTGGATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCgg                                                                                                  <  6:296659/112‑1 (MQ=255)
                                                                                   cAGAGTGGGACTACTGGGCAGCCTGGATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCgg                                                                                                  >  5:296659/1‑112 (MQ=255)
                                                                                                ctGGGCAGCCTGGATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCGGCGATACCGTCCAGGTGCCGAAGGAGCTGATGCCATGACCGTGATCCTTcc                                                >  4:139748/1‑149 (MQ=255)
                                                                                                    tcAGCCTTGATAACGTCTAACGGCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTTCAGGCGGCGTGCAGGGCCATAGTCGCCCTCCAGCTCGGCGATACCGTCCAGGTGCCGAAGGAGCTGATGCCATGACCGTTATCCTTCCCCTc                                            <  8:344717/148‑1 (MQ=255)
                                                                                                    gCAGCCTGGATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCGGCGATACCGTCCAGGTGCCGAAGGAGCTGATGCCATGACCGTGATCCTTCCCCTc                                            <  4:286097/149‑1 (MQ=255)
                                                                                                    gCAGCCTGGATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCGGCGATACCGTCCAGGTGCCGAAGGAGCTGATGCCATGACCGTGATCCTTCCCCTc                                            <  8:6473/149‑1 (MQ=255)
                                                                                                     cAGCCTGGATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCGGCGATACCGTCCAgg                                                                                    >  4:180138/1‑108 (MQ=255)
                                                                                                     cAGCCTGGATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCGGCGATACCGTCCAgg                                                                                    <  3:180138/108‑1 (MQ=255)
                                                                                                       gCCTGGATAACCGATAACGGCAAGGACGCCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCGGCGATACCGTCCAGGTGCCGAAGGAGCTGATGCCATGACCGTGATc                                                     >  6:240476/1‑137 (MQ=255)
                                                                                                        ccTGGATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCGGCGATACCGTCCAGGTGCCGAAGGAGCTGATGCCATGACCGTGATCCTTCCCCTCGcc                                         >  7:329425/1‑148 (MQ=255)
                                                                                                            gATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCGGCGATACCGTCCAg                                                                                     <  2:378882/100‑1 (MQ=255)
                                                                                                            gATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCGGCGATACCGTCCAg                                                                                     >  1:378882/1‑100 (MQ=255)
                                                                                                                 ccGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCGGCGATACCGTCCAGGTGCCGAAGGAGCTGATGCCATGACCGTGATCCTTCCCCTCGCCTACATGGcc                                >  5:299561/1‑148 (MQ=255)
                                                                                                                  cGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCtgccgttatcggttatccaggctgcccagtagtcccactctggctgcgggcagtgcaggctgacgttgtgcttctgcatgatcggcccgccaaccgcccagtcttcccacgggt                              <  4:182886‑M2/149‑115 (MQ=255)
                                                                                                                  cGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCGGCGATACCGTCCAGGTGCCGAAGGAGCTGATGCGATGACCGTGATCCTTCCCCTCGCCTACATGGCCTa                              >  7:376914/1‑149 (MQ=255)
                                                                                                                   gATAACGGCAAGGACGTCGCCCAGGGCGCTGATCtgccgttatcggttatccaggctgcccagtagtcgccctctggctgcgggcagtgcaggctgacgttgtgcttctgcatgatcggcccgccaaccgcccagtcttcccacgggtt                             <  3:307117‑M2/149‑116 (MQ=255)
                                                                                                                   gATAACGGCAAGGACGTCGCCCAGGGCGCTGATCtgccgttatcggttatccaggctgcccagtagtcccactctggctgcgggcagtgcaggctgacgttgtgcttctgcatgatcggcccgccaaccgcccagtcttcccacgggtt                             <  3:84115‑M2/149‑116 (MQ=255)
                                                                                                                    aTAACGGCAAGGACGTCGCCCAGGGCGCTGATCtgccgttatcggttatccaggctgcccagtagtcccactctggctgcgggcagtgcaggctgacgttgtgcttctgcatgatcggcccgccaaccgcccagtcttcccacgg                                <  3:314463‑M2/145‑113 (MQ=255)
                                                                                                                    aTAACGGCAAGGACGTCGCCCAGGGCGCTGATCtgccgttatcggttatccaggctgcccagtagtcccactctggctgcgggcagtgcaggctgacgttgtgcttctgcatgatcggcccgccaaccgcccagtcttcccacgg                                >  4:314463‑M2/1‑33 (MQ=255)
                                                                                                                          gCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCGGCGATACCGTCCAGGTGCCGAAGGAGCTGATGCCATGACCGTGATCCTTCCCCTCGCCTACATGGCCTACCTGATc                       >  3:365567/1‑148 (MQ=255)
                                                                                                                           cAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCGGCGATACCGTCCAGGTGCCGAAGGAGCTGATGCCCTGACCGAGATCCTTCCCCTCGCCTACATGGCCTACCTGATCTa                     >  5:39603/1‑149 (MQ=255)
                                                                                                                            aaGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCGGCGATACCGTCCAGGTGCCGAAGGAGCTGATGCCATGACCGTGATCCTTCCCCTCGCCTACATGGCCTACCTGATCTAc                    <  6:222470/149‑1 (MQ=255)
                                                                                                                             aGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCGGCGATACCGTCCAGGTGCCGAAGGAGCTGATGCCATGACCGTGATCCTTCCCCTCGCCTACATGGCCTACCTGATCTACa                   <  2:379811/149‑1 (MQ=255)
                                                                                                                              ggACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCGGCGATACCGTCCAGGTGCCGAAGGAGCTGATGCCATGACCGTGATCCTTCCCCTCGCCTACATGGCCTACCTGATCTACAg                  >  5:361219/1‑149 (MQ=255)
                                                                                                                               gACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCGGCGATACCGTCCAGGTGCCGAAGGAGCTGATGCCATGACCGTGATCCTTCCCCTCGCCTACATGGCCTACCTGATCTACAgg                 >  2:87330/1‑149 (MQ=255)
                                                                                                                               gACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCGGCGATACCGTCCAGGTGCCGAAGGAGCTGATGCCATGACCGTGATCCTTCCCCTCGCCTACATGGCCTACCTGATCTACAgg                 <  8:329425/149‑1 (MQ=255)
                                                                                                                               gACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCGGCGATACCGTCCAGGTGCCGAAGGAGCTGATGCCATGACCGTGATCCTTCCCCTCGCCTACATGGCCTACCTGATCTACAgg                 <  4:365567/149‑1 (MQ=255)
                                                                                                                                 cGTGGCCCAGGGCGGTTTTCTGGCCTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCGGCGATACCGTCCAGGTGCCGAAGGAGCTGTTGGCATGACCGTGATCCTTCCCCTCGCCTACATGGCCTACCTGATCTACAgggg               <  6:39603/149‑1 (MQ=255)
                                                                                                                                 cGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCGGCGATACCGTCCAGGTGCCGAAGGAGCTGATGCCATGACCGTGATCCTTCCCCTCGCCTACATGGCCTACCTGATCTACAgggg               <  2:172072/149‑1 (MQ=255)
                                                                                                                                    cGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCGGCGATACCGTCCAGGTGCCGAAGGAGCTGATGCCATGACCGTGATCCTTccc                                               >  7:44156/1‑114 (MQ=255)
                                                                                                                                    cGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCGGCGATACCGTCCAGGTGCCGAAGGAGCTGATGCCATGACCGTGATCCTTccc                                               <  8:44156/114‑1 (MQ=255)
                                                                                                                                         aGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCGGCGATACCGTCCAGGTGCCGAAGGAGCTGATGCCATGACCGTGATCCTTCCCCTCGCCTACATGGCCTACCTGATCTACAGGGGGCTTCTCg       <  2:79586/149‑1 (MQ=255)
                                                                                                                                           ggCGCTGATCtgccgttatcggttatccaggctgcccagtagtcccactctggctgcgggcagtgcaggctgacgttgtgcttctgcatgatcggcccgccaaccgcccagtcttcccacgggttgaagcgcttggtgtgctcgatggc     >  3:182886‑M2/1‑10 (MQ=255)
                                                                                                                                              gcTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCGGCGATACCGTCCAGGTGCCGAAGGAGCTGATGCCATGACCGTGATCCTTCCCCTCGCCTACATGGCCTACCTGATCTACAGGGGGCTTCTCGGTgag  <  6:361219/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                              
CAAGCGCTTCAACCCGTGGGAAGACTGGGCGGTTGGCGGGCCGATCATGCAGAAGCACAACGTCAGCCTGCACTGCCCGCAGCCAGAGTGGGACTACTGGGCAGCCTGGATAACCGATAACGGCAAGGACGTCGCCCAGGGCGCTGATCTGCCGTTGCCGGCGGCGTGCCGGGCCATAGTCGCCCACCAGCTCGGCGATACCGTCCAGGTGCCGAAGGAGCTGATGCCATGACCGTGATCCTTCCCCTCGCCTACATGGCCTACCTGATCTACAGGGGGCTTCTCGGTGAG  >  NC_002947/4424249‑4424539

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.