| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4601389 = | 53 (0.810) | 4 (0.060) | 4/250 | NT | 8.1% | coding (503/633 nt) | PP_4073 | hypothetical protein |
| ? | NC_002947 | 4601426 = | 41 (0.670) | coding (466/633 nt) | PP_4073 | hypothetical protein | |||||
GCCTCGTCGATAAGCGGGTCCAGCCCCTGAGCGTCAAAAACGAGTCCATCAACGGCAGGGTTGTCGCTCTCTACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTGGGCGGTGACCAGTTGCAACCTCGAGATGTTCTGCACGCAGCTGATGATCAG > NC_002947/4601281‑4601570 | aactggtcaccgcccaacccgtcgatgccagccgagtgcaggtgcggttgagaggggagcggggcgctactgtacccacaccgtggcaagtgatggaaaacggccaagTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTg > 6:113529‑M1/109‑149 (MQ=255) ccTCGTCGATAAGCGGGTCCAGCCCCTGAGCGTCAAAAACGAGTCCATCAACGGCAGGGTTGTCGCTCTCTACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGACGAGCACATgg > 3:382041/1‑149 (MQ=255) ctggtcaccgcccaacccgtcgatgccagccgagtgcaggtgcggttgagaggggagcggggcgctactgtacccacaccgtggcaagtgatggaaaacggccaagTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGc > 8:201561‑M1/107‑149 (MQ=255) tcgtcgATAAGCGGGTCCAGCCCCTGAGCGTCAAAAACGAGTCCATCAACGGCAGGGTTGTCGCTCTCTACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCTATACCCGGCAGGCCTCTGCCGGCGGCGAGCACTTGGcc > 7:331841/1‑149 (MQ=255) aTAAGCGGGTCCAGCCCCTGAGCGTCAAAAACGAGTCCATCAACGGCAGGGTTGTCGCTCTCTACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTc < 6:161795/149‑1 (MQ=255) gCGGGTCCAGCCCCTGAGCGTCAAAAACGAGTCCATCAACGGCAGGGTTGTCGCTCTCTACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATc > 6:238188/1‑149 (MQ=255) ccccTGAGCGTCAAAAACGAGTCCATCAACGGCAGGGTTGTCGCTCTCTACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACg < 7:54884/149‑1 (MQ=255) ccTGAGCGTCAAAAACGAGTCCATCAACGGCAGGGTTGTCGCTCTCTACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACtt > 3:304251/1‑141 (MQ=255) ccTGAGCGTCAAAAACGAGTCCATCAACGGCAGGGTTGTCGCTCTCTACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACtt < 4:304251/141‑1 (MQ=255) cTGAGCGTCAAAAACGAGTCCATCAACGGCAGGGTTGTCGCTCTCTACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGTCACGgtg > 2:387663/1‑149 (MQ=255) gAGCGTCAAAAACGAGTCCATCAACGGCAGGGTTGTCGCTCTCTACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGtgtg > 6:158754/1‑149 (MQ=255) aggttCATAATCGAGTCCTTCAACGGCAGGGTTGTCGCTCTCTACTTGAATGTGATGGGCCCGGTTAAATTGCTTGATCTGGTCGATAGCGGGCAGGCCTATTCCGTCGTCGAGCACTTGGCCGTTTTCCATGACTTGCGACGGtgtg < 4:382041/144‑1 (MQ=255) aGCGTCAAAAACGAGTCCATCAACGGCAGGGTTGTCGCTCTCTACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTgg < 5:238188/149‑1 (MQ=255) gTCAAAAACGAGTCCATCAACGGCAGGGTTGTCGCTCTCTACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTa < 7:200149/149‑1 (MQ=255) aCGAGTCCATCAACGGCAGGGTTGTCGCTCTCTACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAgc < 2:341665/149‑1 (MQ=255) aTCAACGGCAGGGTTGTCCCTCTCTACGTGAATCCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCt > 6:206895/1‑149 (MQ=255) tCAACGGCAGGGTTGTCGCTCTCTACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGtttt > 6:126139/1‑109 (MQ=255) tCAACGGCAGGGTTGTCGCTCTCTACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGtttt < 5:126139/109‑1 (MQ=255) gTCGCTCTCTACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCa > 4:100409/1‑149 (MQ=255) ctACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGcc < 7:90529/99‑1 (MQ=255) ctACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGcc > 8:90529/1‑99 (MQ=255) cGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCgg > 1:248741/1‑149 (MQ=255) aTGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGa < 5:356402/149‑1 (MQ=255) tGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATAACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGAc > 5:262433/1‑149 (MQ=255) gggCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACg > 8:78022/1‑149 (MQ=255) ggCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCACGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACgg < 8:331841/149‑1 (MQ=255) ccGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTg > 7:45672/1‑149 (MQ=255) cGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTgg < 4:212529/149‑1 (MQ=255) gATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTc > 6:108066/1‑105 (MQ=255) gATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTggg < 2:248741/149‑1 (MQ=255) gATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTggg < 3:100409/149‑1 (MQ=255) gATCAATTGCTTGATCTGCTCCATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTc < 5:108066/105‑1 (MQ=255) aTTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTGGGCGGt > 1:296453/1‑148 (MQ=255) aTTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTGGGCGGt > 7:153503/1‑148 (MQ=255) aTTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTGGGCGGt > 3:192920/1‑148 (MQ=255) aTTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTGGGCGGTg > 7:348574/1‑149 (MQ=255) cTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTGGGCGGTGAc > 7:23935/1‑147 (MQ=255) cTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTGGGCGGTGAc > 1:148142/1‑147 (MQ=255) gccaagtgctcgacgccggcagaggcctgccgggtatcgagcaCTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTGGGCGGTGACCAg > 8:201561‑M2/44‑149 (MQ=255) caagtgctcgacgccggcagaggcctgccgggtatcgagcaCTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTGGGCGGTGACCAGtt > 6:113529‑M2/42‑149 (MQ=255) aTCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTGGGCGGTGACCAGtt < 6:262433/148‑1 (MQ=255) TCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTGGGCGGTGACCAGTTGCAACCt < 8:360484‑M1/149‑1 (MQ=255) gacgccggcagaggcctgccgggtatcgagcaCTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGc > 7:312831‑M2/33‑114 (MQ=255) gacgccggcagaggcctgccgggtatcgagcaCTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGc < 8:312831‑M2/82‑1 (MQ=255) tACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTGGGCGGTGACCAGTTGCAACCTCgag < 5:158754/149‑1 (MQ=255) ggCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTACCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTGGGCGGTGACCAGTTGCATCCTCGAGATGtt < 5:206895/149‑1 (MQ=255) gCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTGGGCGGTGACCAGTTGCAACCTCGAGATGTTc > 6:40477/1‑149 (MQ=255) ccGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTGGGCGGTGACCAGTTGCAACCTCGAGATGTTCTGCACGCa < 2:131768/146‑1 (MQ=255) ccGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTGGGCGGTGACCAGTTGCAACCTCGAGATGTTCTGCACGCAGc < 7:360484/148‑1 (MQ=255) gagcaCTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTGGGCGGTGACCAGTTGCAACCTCGAGATGTTCTGCACGCAGCTgatgat > 6:402930‑M2/6‑147 (MQ=255) gagcaCTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTGGGCGGTGACCAGTTGCAACCTCGAGATGTTCTGCACGCAGCTgatgat > 5:360286‑M2/6‑147 (MQ=255) agcaCTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTGGGCGGTGACCAGTTGCAACCTCGAGATGTTCTGCACGCAGCTGATGATCAg < 4:192920‑M2/145‑1 (MQ=255) | GCCTCGTCGATAAGCGGGTCCAGCCCCTGAGCGTCAAAAACGAGTCCATCAACGGCAGGGTTGTCGCTCTCTACGTGAATGCGATGGGCCCCGATCAATTGCTTGATCTGCTCGATACCCGGCAGGCCTCTGCCGGCGTCGAGCACTTGGCCGTTTTCCATCACTTGCCACGGTGTGGGTACAGTAGCGCCCCGCTCCCCTCTCAACCGCACCTGCACTCGGCTGGCATCGACGGGTTGGGCGGTGACCAGTTGCAACCTCGAGATGTTCTGCACGCAGCTGATGATCAG > NC_002947/4601281‑4601570 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |