New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5084615 =	54 (0.830)	3 (0.050)	3/252	NT	5.6%	intergenic (‑350/+35)	alaS/astE	alanine‑‑tRNA ligase/succinylglutamate desuccinylase
	?	NC_002947	5084650 =	50 (0.810)					coding (1008/1008 nt)	astE	succinylglutamate desuccinylase

AATTAAAGGGTTTTCATCAAGGATAGGATCCGAAACTGTGTCGCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGGCACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCATCTCGGCCAGGTCTTCAGCCAGCAGGTAACCCT  >  NC_002947/5084504‑5084798                                                                                                                                                    |                                                                                                                                                     aaTTAAAGGGTTTTCATCAAGGATAGGATCCGAAACTGTGTCGCCTGTTTAGCGGGTAAACCCGCTCCTACGGGCACGGCACCACATTGAGACCTTGGACATATATCGTAGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCtctcc                                                                                                                                                    >  4:213220/1‑148 (MQ=255)  aTTAAAGGGTTTTCATCAAGGATAGGATCCGAAACTGTGTCGCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGGCACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCAc                                                                                                                                                   >  7:353397/1‑149 (MQ=255)   ttAAAGGGTTTTCATCAAGGATAGGATCCGAAACTGTGTCGCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGGCACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCAcc                                                                                                                                                  >  1:290166/1‑149 (MQ=255)   ggtggtcgaggaggagggtgcgcgcatcatcttccccaaccccaaggtcaagaacggcttgcgcgccggcattctgatcgtgccggattcggggcagcgcctggggtgaGAGCGGGGT‑CATCCACGAAACAGGCGACACCGCTCTCAcc                                                                                                                                                  >  1:229594‑M1/110‑149 (MQ=255)         ggTTTTCATCAAGGATAGGATCCGAAACTGTGTCGCCTGTTTAGCGGGTAAACCCGCTACTACGGGCACGGCACCACATTGAGACCTTGCACATATCTCGTAGGATCGGGGT‑CACCCACCAAAAAGGCGCCAACGCTCTCACCCCAGgc                                                                                                                                            >  5:54622/1‑149 (MQ=255)                atcaAGGATAGGATCCGAAACTGTGTCGCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGGCACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGccc                                                                                                                                     >  3:307140/1‑149 (MQ=255)                 tcaAGGATAGGATCCGAAACTGTGTCGCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGGCACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCACCCCAGgc                                                                                                                                            >  3:232710/1‑141 (MQ=255)                 tcaAGGATAGGATCCGAAACTGTGTCGCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGGCACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGcccc                                                                                                                                    >  6:86403/1‑149 (MQ=255)                 tcaAGGATAGGATCCGAAACTGTGTCGCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGGCACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACACACGCAACCGGCGACACCGCTCTCACCCCAGGCGCTGcccc                                                                                                                                    >  5:326522/1‑149 (MQ=255)                 tcaAGGATAGGATCCGAAACTGTGTCGCCTGTTTAGCGGGTAAAACCGCTCCTACGGGCACGGCCCCACATTGAGCCCGTGGACAAATGTAGTAGGAGCGGGGT‑GACCCCCGCAACACGCGACACCGCACTCACCCCACGCGCTGcccc                                                                                                                                    >  8:133519/1‑149 (MQ=255)                           gatCCGAAACTGTGTCGCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGGCACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCa                                                                                                                          >  3:356687/1‑149 (MQ=255)                            atCCGAAACTGTGTCGCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGGCACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCAc                                                                                                                         >  4:238462/1‑149 (MQ=255)                             tCCGAAACTGTGTCGCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGGCACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCAc                                                                                                                         >  3:392509/1‑148 (MQ=255)                              ccGAAACTGTGTCGCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGGCACCACATTGAGCCCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGa                                                                                                                       >  7:3108/1‑149 (MQ=255)                                           gCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGGCACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCACGAAACAGGCTACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGgc                                                                                                          >  6:304032/1‑149 (MQ=255)                                             cTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGGCACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGgcgc                                                                                                        >  5:90215/1‑149 (MQ=255)                                                tttCGCGGGTAAACCCGCTCCTACGGGCACGGCACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGgcgcgc                                                                                                      <  6:90215/148‑1 (MQ=255)                                                ggtcaagaacggcttgcgcgccggcattctgatcgtgccggattcggggcagcgcctggggtgaGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCAc                                                                                                                                                   >  6:311658‑M1/65‑103 (MQ=255)                                                ggtcaagaacggcttgcgcgccggcattctgatcgtgccggattcggggcagcgcctggggtgaGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCAc                                                                                                                                                   <  5:311658‑M1/39‑1 (MQ=255)                                                  tCGCGGGTAAACCCGCTCCTACGGGCACGGCACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAg                                                                                                   >  3:320251/1‑149 (MQ=255)                                                                    ctcgggccacgccacCAATTTCAGACGTTCAACATTTCTCGTCGGAGGGGGGT‑CACCAACTAAACTGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCttgg                                                                                   <  5:86403/140‑1 (MQ=255)                                                                    cTACGGGCACGGCACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCg                                                                                                            >  1:123677/1‑122 (MQ=255)                                                                    cTACGGGCACGGCACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCg                                                                                                            <  2:123677/122‑1 (MQ=255)                                                                    cTACGGGCACGGCACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCttgggg                                                                                 >  2:207791/1‑149 (MQ=255)                                                                    cTACGGGCACGGCACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCttgggg                                                                                 >  4:139558/1‑149 (MQ=255)                                                                       cGGCCACGCCACAACATTCCCCCCTTCCACATATCTCGTCGGCGGGGGGC‑CACCCACTAAACTGGCCACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCttggggttg                                                                              <  8:3108/149‑1 (MQ=255)                                                                          gcacggcacCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCttggggttgggg                                                                           <  8:189779/149‑1 (MQ=255)                                                                          gcacggcacCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCttggggttggg                                                                            >  7:189779/1‑148 (MQ=255)                                                                            acggcacCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGaa                                                                         <  1:207791/149‑1 (MQ=255)                                                                            acggcacCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCACCGAATCCGGCACCATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCttggggttgggg                                                                           >  8:302964/1‑147 (MQ=255)                                                                              ggcacCACTTTTATACCTTGAACTTATCTCTTTGGAGGGGGGT‑AACCCCCTAAACCGGGTACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAga                                                                       <  2:290166/149‑1 (MQ=255)                                                                              cgcacCAAATTGACAACTTTCAAATATCTCGTCGGCGCGGGGA‑CACCCAATAAACTGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAga                                                                       <  1:286809/148‑1 (MQ=255)                                                                                  ccacATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAg                                                                        <  6:240745/144‑1 (MQ=255)                                                                                  ccacATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAg                                                                        >  5:240745/1‑144 (MQ=255)                                                                                      aTTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATgcgc                                                               >  7:191132/1‑149 (MQ=255)                                                                                                 gCACATATCTCGTAGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATACGGCACGATCAGAATGCCGGCGCGCACGACGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACcctccac                                                    >  7:152195/1‑147 (MQ=255)                                                                                                   acaTATCTCGTAGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAgatgat                                                                   >  7:179209/1‑132 (MQ=255)                                                                                                   acaTATCTCGTAGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAgatgat                                                                   <  8:179209/132‑1 (MQ=255)                                                                                                   acaTATCTAGTAGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACcctcctcct                                                  >  2:384387/1‑149 (MQ=255)                                                                                                       ttctcGTAGGAGGGGGGT‑CACCCACTAAAATGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGac                                              <  4:307140/148‑1 (MQ=255)                                                                                                       atCTCGTAGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGac                                              >  3:117029/1‑149 (MQ=255)                                                                                                        tctcGTAGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGAGCGCACCCTCCTCCTCGac                                              >  8:93349/1‑148 (MQ=255)                                                                                                         ctcGTAGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGacca                                            >  6:285840/1‑149 (MQ=255)                                                                                                          tcGTAGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGaccac                                           >  7:287920/1‑149 (MQ=255)                                                                                                            ggtgagagcggtgtcgcctgtttcgtggatgaccccgctcTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGaccacc                                          >  1:229594‑M2/41‑149 (MQ=255)                                                                                                            gTAGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCttggggttgg                                                                             <  3:219701/113‑1 (MQ=255)                                                                                                            gTAGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCttggggttgg                                                                             >  4:219701/1‑113 (MQ=255)                                                                                                            gTAGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGaccacc                                          >  3:397202/1‑148 (MQ=255)                                                                                                             gttgttgGGGGTACACCCACAAAACTGGCTACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGaccacc                                          >  4:356687‑M1/8‑148 (MQ=255)                                                                                                             gtgagagcggtgtcgcctgtttcgtgggtgaccccgctcTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGAcc                                                                                       <  5:311658‑M2/64‑1 (MQ=255)                                                                                                             gtgagagcggtgtcgcctgtttcgtgggtgaccccgctcTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGAcc                                                                                       >  6:311658‑M2/40‑103 (MQ=255)                                                                                                              aGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACcctc                                                       <  4:174153/133‑1 (MQ=255)                                                                                                              aGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACcctc                                                       >  3:174153/1‑133 (MQ=255)                                                                                                                           aCCCACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCATCTCGGc                            >  6:204282/1‑148 (MQ=255)                                                                                                                            cccACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCATCTCGGCCa                          <  4:397202/149‑1 (MQ=255)                                                                                                                             ccACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGCCCACCCAGCGCATCTCGGCCAg                         >  4:262330/1‑149 (MQ=255)                                                                                                                             ccACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCATCTCGGCCAg                         >  6:295787/1‑149 (MQ=255)                                                                                                                             ccACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCATCTCGGCCAg                         <  5:204282/149‑1 (MQ=255)                                                                                                                               aCGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCATCTCGGCCAGGt                       >  2:135254/1‑149 (MQ=255)                                                                                                                                   aaCTGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCATCTCGGCCAGGTCTTc                   <  6:326522/149‑1 (MQ=255)                                                                                                                                            cacCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCATCTCGGCCAGGTCTTCAGCcagcag          <  4:392509/149‑1 (MQ=255)                                                                                                                                             gccgctcTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCATCTCGGCCAGGTCTTCAGCcagcag          <  3:255833‑M2/141‑1 (MQ=255)                                                                                                                                             acCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCATCTCGGCCAGGTCTTCAGCCAGCAgg         >  8:89619/1‑149 (MQ=255)                                                                                                                                               cgctcTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCATCTCGGCCAGGTCTTCAGCcagcag          >  4:255833‑M2/6‑146 (MQ=255)                                                                                                                                                gctcTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGTGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCATCTCGGCCAGGTCTTCAGCCAGCAGGTaa      <  5:285840‑M2/145‑1 (MQ=255)                                                                                                                                                  tcTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCATCTCGGCCAGGTCTTCAGCcagcag          <  2:256875‑M2/141‑1 (MQ=255)                                                                                                                                                  tcTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCATCTCGGCCAGGTCTTCAGCcagcag          >  1:256875‑M2/3‑143 (MQ=255)                                                                                                                                                   cTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCAtctc                               >  8:28734‑M2/2‑121 (MQ=255)                                                                                                                                                   cTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCAtctc                               <  7:28734‑M2/120‑1 (MQ=255)                                                                                                                                                    tcACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCATCTCGGCCAGGTCTTCAGCCAGCAGGTAACCCt  >  3:188548/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                     AATTAAAGGGTTTTCATCAAGGATAGGATCCGAAACTGTGTCGCCTGTTTCGCGGGTAAACCCGCTCCTACGGGCACGGCACCACATTGAGACCTTGCACATATCTCGTAGGAGCGGGGT‑CACCCACGAAACAGGCGACACCGCTCTCACCCCAGGCGCTGCCCCGAATCCGGCACGATCAGAATGCCGGCGCGCAAGCCGTTCTTGACCTTGGGGTTGGGGAAGATGATGCGCGCACCCTCCTCCTCGACCACCCAGCGCATCTCGGCCAGGTCTTCAGCCAGCAGGTAACCCT  >  NC_002947/5084504‑5084798

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.