New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5962360	70 (1.080)	7 (0.120)	6/246	NT	9.8%	coding (37/864 nt)	dapF	diaminopimelate epimerase
	?	NC_002947	= 5962379	63 (1.040)					coding (56/864 nt)	dapF	diaminopimelate epimerase

CCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTCAGCCAGCACGCGCACATCCAGCCCAAGCACGCCAAGCAATGGGGTGACCGCCATACCGGTGTCGGCTTCGACCAGTTGCTGATCGTCGAGGCGCCGAACAACC  >  NC_002947/5962231‑5962522                                                                                                                                                       |                                                                                                                                                ccAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGAt                                                                                                                                                 >  5:61492/1‑149 (MQ=255) acAACTACACCACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGAt                                                                                                                                                 <  4:315876/148‑1 (MQ=255)  cAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGGACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATg                                                                                                                                                <  7:215454‑M2/149‑2 (MQ=255)  cAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATg                                                                                                                                                <  1:369639‑M2/149‑2 (MQ=255)   aaCTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATgc                                                                                                                                               >  7:210754‑M2/1‑147 (MQ=255)   aaCTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATg                                                                                                                                                <  7:144482‑M2/148‑2 (MQ=255)     cTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATgcat                                                                                                                                             <  6:41534‑M2/149‑5 (MQ=255)     cTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATgcat                                                                                                                                             >  2:341906‑M2/1‑145 (MQ=255)      tACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATgcatg                                                                                                                                            >  3:231418‑M2/1‑144 (MQ=255)        caacaCCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATgcatgg                                                                                                                                           >  8:215454‑M2/1‑142 (MQ=255)         aacaCCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATgcatgggc                                                                                                                                         <  2:59764‑M2/149‑9 (MQ=255)           cacCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCAtgggctg                                                                                                                                       >  7:190634/1‑149 (MQ=255)             cccGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCAtgggctggg                                                                                                                                     <  3:361446/149‑1 (MQ=255)             cccGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCAtgggctggg                                                                                                                                     >  3:86539/1‑149 (MQ=255)              ccGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCAtgggctggg                                                                                                                                     >  6:248685/1‑148 (MQ=255)               cgcgGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCa                                                                                                                                   <  5:226705/149‑1 (MQ=255)                 cgGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAAc                                                                                                                                 <  3:298969/149‑1 (MQ=255)                 cgGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAAc                                                                                                                                 <  7:226131/149‑1 (MQ=255)                 cgGCCGTTGCGCTGAAATCCTGGGCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGTACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAAc                                                                                                                                 <  5:17756/149‑1 (MQ=255)                  ggCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAAc                                                                                                                                 >  7:34329/1‑148 (MQ=255)                       ttGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTc                                                                                                                           <  5:357970/149‑1 (MQ=255)                          cgcTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCAt                                                                                                                         <  5:164964/148‑1 (MQ=255)                          cgcTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCGGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATg                                                                                                                        <  5:67847/149‑1 (MQ=255)                           gcggAAATCCTGGTCTACGGCGACCAGGCGTTCGAAGAACGCCGCGGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGTGTTAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATg                                                                                                                        <  1:110674/146‑1 (MQ=255)                           gcTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATgg                                                                                                                       >  1:199682/1‑149 (MQ=255)                               aaaTCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTcc                                                                                                                    <  3:181551/148‑1 (MQ=255)                               aaaTCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTc                                                                                                                     <  8:325340/147‑1 (MQ=255)                                  tCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGa                                                                                                                >  2:325345/1‑149 (MQ=255)                                   ccTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCAGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGAc                                                                                                                              >  8:359881/1‑134 (MQ=255)                                   ccTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCAGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGAc                                                                                                                              <  7:359881/134‑1 (MQ=255)                                       gTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCt                                                                                                             <  1:59764/147‑1 (MQ=255)                                       gTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTgg                                                                                                           <  8:144482/149‑1 (MQ=255)                                       gTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTgg                                                                                                           <  4:86539/149‑1 (MQ=255)                                       gTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTg                                                                                                            <  2:192345/148‑1 (MQ=255)                                          gACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGt                                                                                                          >  7:56083/1‑147 (MQ=255)                                          gACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTca                                                                                                        <  6:39416/149‑1 (MQ=255)                                          gACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTc                                                                                                         <  6:61492/148‑1 (MQ=255)                                          gACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTc                                                                                                         <  8:34329/148‑1 (MQ=255)                                           aCGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTcag                                                                                                       <  8:190634/149‑1 (MQ=255)                                             ggCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTcagcc                                                                                                     <  5:248685/149‑1 (MQ=255)                                                  ccAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTc                                                                                                                           <  5:385461/122‑1 (MQ=255)                                                  ccAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTc                                                                                                                           >  6:385461/1‑122 (MQ=255)                                                     ggCGTTCGAAGTACGCCGCCGCGAGACCGTCGGCGAACTGTATGCTGGCGAAAGCCTGGTGCCGGAG‑TAAGCCCATGCTGCTGCAGTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTCAGCCAGCAcgc                                                                                              <  1:325345/149‑1 (MQ=255)                                                           cGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTCAGCCAGCACGCGCACATc                                                                                       >  7:223929/1‑149 (MQ=255)                                                            gAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCt                                                                                                                   <  8:59625/120‑1 (MQ=255)                                                            gAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCt                                                                                                                   >  7:59625/1‑120 (MQ=255)                                                               gTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTCAGCCAGCACGCGCACATCCAGc                                                                                   <  8:223929/149‑1 (MQ=255)                                                                   gccgccgcGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTCAGCCAGCACGCGCACATCCAGCCCaa                                                                               <  6:255846/149‑1 (MQ=255)                                                                        cgcgAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTcag                                                                                                       <  8:139040/120‑1 (MQ=255)                                                                        cgcgAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTcag                                                                                                       >  7:139040/1‑120 (MQ=255)                                                                         gcgAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTCAGCCAGCACGCGCACATCCAGCCCAAGCACGc                                                                         <  2:369639/149‑1 (MQ=255)                                                                             gaCCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTCAGCCAGCACGCGCACATCCAGCCCAAGCACGCCAAg                                                                     <  2:199682/149‑1 (MQ=255)                                                                                 gTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTCAGCCAGCACGCGCACATCCAGCCCAAGCACGCCAAGCAAt                                                                 >  2:344976/1‑149 (MQ=255)                                                                                     ccGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTCAGCCAGCACGCGCACATc                                                                                       >  8:329673/1‑123 (MQ=255)                                                                                     ccGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTCAGCCAGCACGCGCACATc                                                                                       <  7:329673/123‑1 (MQ=255)                                                                                                  tGGTGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTATTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTCAGCCAGCACGCGCACATCCAGCCCAAGCACGACAAGCAATGGCGAGACCGCCATAcc                                                >  2:389820/1‑149 (MQ=255)                                                                                                  tGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTCAGCCAGCACGCGCACATCCAGCCCAAGCACGCCAAGCAATGGGGTGACCGCCATAcc                                                >  3:313882/1‑149 (MQ=255)                                                                                                     cGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTCAGCCAGCACGCGCACATCCAGCCCAAGCACGCCAAGCAATGGGGTGACCGCCATACCGgt                                             <  8:56083/149‑1 (MQ=255)                                                                                                      gAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTcag                                                                                                       >  7:45180/1‑90 (MQ=255)                                                                                                      gAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTcag                                                                                                       <  8:45180/90‑1 (MQ=255)                                                                                                      gAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTCAGCCAGCACGCGCACGTCCAGCCCAAGCCCGCCAAGCAATGGGGTGACCGCCATACCGgtg                                            >  8:175921/1‑149 (MQ=255)                                                                                                          gCCTGCTGCCTGAG‑TAAGCCCATGCTTCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTCAGCCAGCACGCGCACATCCAGCCCAAGCACGCCAAGCAATGGGGTGACCGCCATACCGGTGTCgg                                        <  2:190550/149‑1 (MQ=255)                                                                                                          gCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTCAGCCAGCACGCGCACATCCAGCCCAAGCACGCCAAGCAATGGGGTGACCGCCATACCGGTGTCgg                                        >  1:266340/1‑149 (MQ=255)                                                                                                                  ccGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTCAGCCAGCACGCGCACATCCAGCCCAAGCACGCCAAGCAATGGGGTGACCGCCATACCGGTGTCGGCTTCGAc                                 >  4:25979/1‑148 (MQ=255)                                                                                                                     gAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATgcatgggcttactccggcagcaggctttcgccagcatacagttcggcgacggtctcgcggcggc                                                                                 <  2:388503‑M2/97‑65 (MQ=255)                                                                                                                     gAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATgcatgggcttactccggcagcaggctttcgccagcatacagttcggcgacggtctcgcggcggc                                                                                 >  1:388503‑M2/1‑33 (MQ=255)                                                                                                                     gAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTCAGCCAGCACGCGCACATCCAGCCCAAGCACGCCAAGCAATGGGGTGACCGCCATACCGGTGTCGGCTTCGACCAGt                             <  5:41534/149‑1 (MQ=255)                                                                                                                     gAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTCAGCCAGCACGCGCACATCCAGCCCAAGCACGCCAAGCAATGGGGTGACCGCCATACCGGTGTCGGCTTCGACCAGt                             <  5:390984/149‑1 (MQ=255)                                                                                                                       g‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATgcatgggcttactccggcagcaggctttcgccagcatacagttcggcgacggtctcgcggcggcgtacttcgaacgcctggtcgccgtcgaccaggatttcagcgcaacggccgcggg                           <  7:88781‑M2/149‑119 (MQ=255)                                                                                                                       g‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTCAGCCAGCACGCGCACATCCAGCCCAAg                                                                              >  6:323110/1‑98 (MQ=255)                                                                                                                       g‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTCAGCCAGCACGCGCACATCCAGCCCAAg                                                                              <  5:323110/98‑1 (MQ=255)                                                                                                                           aGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCAAGGTCCTGGACCTGGTCAGCCAGCACGCGCACATCCAGCCCAAGCACGCCAAGCAAAGGGGTGACCGCCATACCGGTGTCGGCTTCGCCCAGTTGCt                         >  2:241795/1‑148 (MQ=255)                                                                                                                            gCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTcagc                                                                                                      <  8:100130/70‑1 (MQ=255)                                                                                                                            gCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTcagc                                                                                                      >  7:100130/1‑70 (MQ=255)                                                                                                                            gCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTCAGCCAGCACGCGCACATCCAGCCCAAGCACGCCAAGCAATGGGGTGACCGCCATACCGGTGTCGGCTTCGACCAGTTGCTGa                       >  6:168808/1‑149 (MQ=255)                                                                                                                            gCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTCAGCCAGCACGCGCACATCCAGCCCAAGCACGCCAAGCAATGGGGTGACCGCCATACCGGTGTCGGCTTCGACCAGTTGCTGa                       >  6:286212/1‑149 (MQ=255)                                                                                                                             cccATGCTGCTGC‑GTTTTACCAAGATgcatgggcttactccggcagcaggctttcgccagcatacagttcggcgacggtctcgcggcggcgtacttcgaacgcctggtcgccgtcgaccaggatttcagcgcaacggccgcgggtgttg                      <  2:177846‑M2/149‑124 (MQ=255)                                                                                                                              ccATGCTGCTGC‑GTTTTACCAAGATgcatgggcttactccggcagcaggctttcgccagcatacagttcggcgacggtctcgcggcggcgtacttcgaacgcctggtcgccgtcgaccaggatttcagcgcaacggccgcgggtgttg                      <  4:29717‑M2/148‑124 (MQ=255)                                                                                                                              ccATGCTGCTGC‑GTTTTACCAAGATgcatgggcttactccggcagcaggctttcgccagcatacagttcggcgacggtctcgcggcggcgtacttcgaacgcctggtcgccgtcgaccaggatttcagcgcaacggccgcgggtgttg                      <  4:119191‑M2/148‑124 (MQ=255)                                                                                                                              ccATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTCAGCCAGCACGCGCACATCCAGCCCAAGCACGCCAAGCAATGGGGTGACCGCCATACCGGTGTCGGCTTCGACCAGTTGCTGAtc                     <  6:23437/149‑1 (MQ=255)                                                                                                                                 tgctgctgc‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTCAGCCAGCACGCGCACATCCAGCCCAAGCACGCCAAGCAATGGGGTGACCGCCATACCGGTGTCGGCTTCGACCAGTTGCTGAtcgtc                  <  4:24019/149‑1 (MQ=255)                                                                                                                                      ctgc‑GTTTTACCAAGATgcatgggcttactccggcagcaggctttcgccagcatacagttcggcgacggtctcgcggcggcgtacttcgaacgcctggtcgccgtcgaccaggatttcagcgcaacggccgcgggtgttgtagttgga              >  1:177846‑M2/1‑17 (MQ=255)                                                                                                                                       tgc‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTCAGCCAGCACGCGCTCATCCAGCCCAAGCACGCCAAGCAATGGGGTGACCGCCATACCGGTGTCGGCTTCGACCAGTTGCTGATCGTCGAGgcg            >  3:280028/1‑149 (MQ=255)                                                                                                                                       tgc‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTCAGCCAGCACGCGCACATCCAGCCCAAGCACGCCAAGCAATGGGGTGACCGCCATACCGGTGTCGGCTTCGACCAGTTGCTGATCGTCGAGgcg            >  6:251703/1‑149 (MQ=255)                                                                                                                                           gTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTCAGCCAGCACGCGCACATCCAGCCCAAGCACGCCAAGCAATGGGGTGACCGCCATACCGGTGTCGGCTTCGACCAGTTGCTGATCGTCGAGGCGcc          >  6:126320/1‑148 (MQ=255)                                                                                                                                                  cAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTCAGCCAGCACGCGCTCATCCAGCCCAAGCACGCCAAGCAATGGGGTGACCGCCATACCGGTGTCGGCTTCGACCAGTTGCTGATCGTCGAGGCGCCGAACAAcc  <  4:280028/149‑1 (MQ=255)                                                                                                                                                   aaGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTCAGCCAGCACGCGCACATCCAGCCCAAGCACGCCAAGCAATGGGGTGACCGCCATACCGgtgt                                           >  7:63854/1‑107 (MQ=255)                                                                                                                                                   aaGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTCAGCCAGCACGCGCACATCCAGCCCAAGCACGCCAAGCAATGGGGTGACCGCCATACCGgtgt                                           <  8:63854/107‑1 (MQ=255)                                                                                                                                                   aaGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTCAGCCAGCACGCGCACATCCAGCCCAAGCACGCCAAGCAATGGGGTGACCGCCATACCGGTGTCGGCTTCGACCAGTTGCTGAtc                     >  8:186205/1‑129 (MQ=255)                                                                                                                                                   aaGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTCAGCCAGCACGCGCACATCCAGCCCAAGCACGCCAAGCAATGGGGTGACCGCCATACCGGTGTCGGCTTCGACCAGTTGCTGAtc                     <  7:186205/129‑1 (MQ=255)                                                                                                                                                       |                                                                                                                                                CCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAG‑TAAGCCCATGCTGCTGC‑GTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTCAGCCAGCACGCGCACATCCAGCCCAAGCACGCCAAGCAATGGGGTGACCGCCATACCGGTGTCGGCTTCGACCAGTTGCTGATCGTCGAGGCGCCGAACAACC  >  NC_002947/5962231‑5962522

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.