New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 102602 =68 (1.260)4 (0.080) 4/252 NT 5.3% coding (1422/2052 nt) prlC oligopeptidase A
?NC_002947 102640 = 76 (1.450)coding (1460/2052 nt) prlC oligopeptidase A

TGATGCCGGACACGCCGGCATGCTCAATGCGGGTCAGCATGTGGTGCAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/102654‑102602
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgGCGTGTCCGGCATCAACGGCGTGGCCTGGGATGCGGTCGAGCTGCCCAGCCAGTTCATGGAAAACTGGTGCTGGGAGCCGGAAGGCCTGGCACTGATTTCTGGTCACTACGAAACCGGCGCCGCCCTGCCCCAGGACCTGCTGGA  >  NC_002947/102640‑102784
                                                                                                                                                                                                      
TGATGCCGGACACGCCGGCATGCTCAATGCGGGTCAGCATGTGGTGCAGGC‑‑‑CGTGACCGGCATCAACGGCGTGGCCTGGGATGCGGTCGAGCTGCCCAGCCAGTTCATGGAAAACTGGTGCTGGGAGCCGGAAGGCCTGGCACTGATTT                                                >  4:261354/1‑149
             GCCTGCATGCTCAATGCGGGTCAGCATGTGGTGCAGGCCGGCGTGTCCGGCATCAACGGCGTGGCCTGGGATGCGGTCGAGCTGCCCAGCCAGTTCATGGAAAACTGGTGCTGGGAGCCGGAAGGCCTGGCACTGATTTCT                                              <  6:53595/141‑1
             GCCGGCATGCTCAATGCGGGTCAGCATGTGGTGCAGGCCGGCGTGTCCGGCATCAACGGCGTGGCCTGGGATGCGGTCGAGCTGCCCAGCCAGTTCATGGAAAACTGGTGCTGGGAGCCGGAAGGCCTGGCACTGATTTCTGagatcg                                       >  5:53595/1‑142
              CCGGCATGCTCAATGCGGGTCAGCATGTGGTGCAGGCCGGCGTGTCCGGCATCAACGGCGTGGCCTGGGATGCGGTCGAGCTGCCCAGCCAGTTCATGGAAAACTGGTGCTGGGAGCCGGAAGGCCTGGCACTGATTTCTGGTCACTAC                                     >  6:156834/1‑149
                                                  CCGGCGTGTCCGGCATCAACGGCGTGGCCTGGGATGCGGTCGAGCTGCCCAGCCAGTTCATGGAAAACTGGTGCTGGGAGCCGGAAGGCCTGGCACTGATTTCTGGTCACTACGAAACCGGCGCCGCCCTGCCCCAGGACCTGCTGGA  >  3:323169/1‑148
                                                                                                                                                                                                      
TGATGCCGGACACGCCGGCATGCTCAATGCGGGTCAGCATGTGGTGCAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/102654‑102602
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgGCGTGTCCGGCATCAACGGCGTGGCCTGGGATGCGGTCGAGCTGCCCAGCCAGTTCATGGAAAACTGGTGCTGGGAGCCGGAAGGCCTGGCACTGATTTCTGGTCACTACGAAACCGGCGCCGCCCTGCCCCAGGACCTGCTGGA  >  NC_002947/102640‑102784

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.