New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 422700	46 (0.850)	4 (0.080)	4/242	NT	8.1%	coding (1248/2787 nt)	PP_0348	hypothetical protein
	?	NC_002947	= 422741	48 (0.950)					coding (1207/2787 nt)	PP_0348	hypothetical protein

CTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/422550‑422700 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgccgtggTTCGATACCGACTACTGGCTGACTGCCCGGGTGATCCATGCCCACGGCAAAGCCATGCCCGCCGGGCTCACGCCGCAGTATGTCAAGCACATGGTCCGGGAACTGAACGTGGGTGACAGCTACGCAAAGTACCTGCACACCCAAC  <  NC_002947/422741‑422597                                                                                                                                                                                                                                                                                                          CTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGT                                                                                                                                                     >  6:162986/1‑149    GCTGTGCGGAGTCAGGCGCCATTTGCCTGCTCTGGAACTGATGTGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGTCATGGCTTTGCCGTG                                                                                                                                                    <  6:120106/147‑1          CGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTG                                                                                                                                                    <  7:107298/141‑1          CGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTG                                                                                                                                                    >  8:107298/1‑141                               TGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGTTCGATACCGACTACTGGCTGACTGCCC                                                                                                                       >  5:126342/1‑149                                                    GGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGTTCGATACCGACTACTGGCTGACTGCCCGGGTGATCCATGCCCACGG                                                                                                    >  5:304035/1‑147                                                    GGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGTTCGATACCGACTACTGGCTGACTGCCCGGGTGATCCATGCCCACGG                                                                                                    <  6:304035/147‑1                                                     GTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGTTCGATACCGACTACTGGCTGACTGCCCGGGTGATCCATGCCCACGGCAA                                                                                                 <  6:126342/149‑1                                                                                                                                               TTGCCGTGGTTCGATACCGACTACTGGCTGACTGCCCGGGTGATCCATGCCCACGGCAAAGCCATGCCCGCCGGGCTCACGCCGCAGTATGTCAAGCACATGGTCCGGGAACTGAACGTGGGTGACAGCTACGCAAAGTACCTGCACAC       >  5:162986/1‑149                                                                                                                                                 GCCGTGGTTCGATACCGACTACTGGCTGACTGCCCGGGTGATCCATGCCCACGGCAAAGCCATGCCCGCCGGGCTCACGCCGCAGTATGTCAAGCACATGGTCCGGGAACTGAACGTGGGTGACAGCTACGCAAAGTACCTGCACACC      >  1:149465/1‑148                                                                                                                                                   ctTGGTTCGATACCGACTACTGGCTGACTGCCCGGGTGATCCATGCCCACGGCAAAGCCATGCCCGCCGGGCTCACGCCGCAGTATGTCAAGCACATGGTCCGGGAACTGAACGTGGGTGACAGCTACGCAAAGTACCTGCACACCCAA   <  8:138288/147‑1                                                                                                                                                   CGTGGTTCGATACCGACTACTGGCTGACTGCCCGGGTGATCCATGCCCACGGCAAAGCCATGCCCGCCGGGCTCACGCCGCAGTATGTCAAGCACATGGTCCGGGAACTGAACGTGGGTGACAGCTACGCAAAGTACCTGCACACCCAA   <  6:20017/149‑1                                                                                                                                                    GTGGTTCGATACCGACTACTGGCTGACTGCCCGGGTGATCCATGCCCACGGCAAAGCCATGCCCGCCGGGCTCACGCCGCAGTATGTCAAGCACATGGTCCGGGAACTGAACGTGGGTGACAGCTACGCAAAGTAC               >  3:34943/1‑136                                                                                                                                                    GTGGTTCGATACCGACTACTGGCTGACTGCCCGGGTGATCCATGCCCACGGCAAAGCCATGCCCGCCGGGCTCACGCCGCAGTATGTCAAGCACATGGTCCGGGAACTGAACGTGGGTGACAGCTACGCAAAGTAC               <  4:34943/136‑1                                                                                                                                                    GTGGTTCGATACCGACTACTGGCTGACTGCCCGGGTGATCCATGACCACGGCAAAGCCATGCCCGCCGGGCTCACGCCGCAGTATGTCAAGCACATGGTCCGGGAACTGAACGTGGGTGACAGCTACGCAAAGTACCTGCACACCCAAC  <  5:27399/149‑1                                                                                                                                                                                                                                                                                                          CTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGATGAGTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/422550‑422700 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgccgtggTTCGATACCGACTACTGGCTGACTGCCCGGGTGATCCATGCCCACGGCAAAGCCATGCCCGCCGGGCTCACGCCGCAGTATGTCAAGCACATGGTCCGGGAACTGAACGTGGGTGACAGCTACGCAAAGTACCTGCACACCCAAC  <  NC_002947/422741‑422597

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.