New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 422700 | 46 (0.850) | 4 (0.080) | 4/242 | NT | 8.1% | coding (1248/2787 nt) | PP_0348 | hypothetical protein |
? | NC_002947 | = 422741 | 48 (0.950) | coding (1207/2787 nt) | PP_0348 | hypothetical protein |
GTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGACCATCTCCACCATCTCGTGGCCCACGCGTCGCATGCCTGCATAGGTGACATAGGATGAGAGGGCGAAGGGATGCATGATGGCGCCCGTGCGGCGGGCG > NC_002947/422597‑422889 | gTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGTCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAAccac < 5:27399‑M2/149‑5 (MQ=255) ttGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAAccacg < 6:20017‑M2/149‑6 (MQ=255) ttGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAAccaag < 8:138288‑M2/149‑6 (MQ=255) ggTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAAccacggc > 1:149465‑M2/1‑141 (MQ=255) gtgtGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAAccacggcaa > 5:162986‑M2/1‑140 (MQ=255) aGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCtt > 6:24467/1‑149 (MQ=255) aGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCtt < 3:224859/149‑1 (MQ=255) gTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAAccac < 4:34943‑M2/136‑5 (MQ=255) gTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAAccac > 3:34943‑M2/1‑132 (MQ=255) gTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGa < 5:24467/149‑1 (MQ=255) cTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAggg < 2:236677/149‑1 (MQ=255) tGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCg < 5:20017/148‑1 (MQ=255) tCACCCACGTTCAGTTCCCGTACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGa < 7:138288/148‑1 (MQ=255) tCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCg < 6:27399/147‑1 (MQ=255) tCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAg > 5:231528/1‑149 (MQ=255) ccACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGa < 1:141193/144‑1 (MQ=255) ccACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGa > 2:141193/1‑144 (MQ=255) cACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGgtgt > 4:310904/1‑149 (MQ=255) gTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGa > 1:152248/1‑149 (MQ=255) aGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTc > 3:147726/1‑149 (MQ=255) cGGACCATGTGCTTGACATACTGCGGCGAGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGAc > 1:20983/1‑149 (MQ=255) cATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGAtt < 1:163544/136‑1 (MQ=255) cATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGAtt > 2:163544/1‑136 (MQ=255) aTGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGACCAtctc > 4:39602/1‑149 (MQ=255) cTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGACCATCTccacca < 2:152248/149‑1 (MQ=255) cTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGACCATCTccacca > 4:263937/1‑149 (MQ=255) cccGGAGGGCATGGCTTTGCCGTGGGCATGGATCACCAGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGCGCGATCTCATCGAGGGTGTTGAGTTCCTCGACCATCTCCACCATCTCGTCGACCACGCGTCGc > 7:79237/1‑148 (MQ=255) ccGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGACCATCTCCACCATCTCGTGGCCCACGCGTCGCAt < 6:231528/149‑1 (MQ=255) gggCAGGGCTTTGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGACCATCTCCACCATCTCGTGGCCCACGCGTCGCATGCCTg < 5:266770/149‑1 (MQ=255) ggCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGACCATCTCCACCATCTCGTGGCCCACGCGTCGCATGCCTg > 7:116691/1‑148 (MQ=255) gCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGACCATCTCCACCATCTCGTGGCCCACGCGTCGCATGCCTGCa < 8:185383/149‑1 (MQ=255) cATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTTCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGACCATCTCCACCATCTCGTGGCCCACGCGTCGCATGc > 1:52137/1‑144 (MQ=255) cATGGCTTTGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGACCATCTCCACCATCTCGTGGCCCACGCGTCGCATGc < 2:52137/143‑1 (MQ=255) gCTTTGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGACCATCTCCACCATCTCGTGGCCCACGCGTCGCATGCCTGCATAGGt > 2:108135/1‑149 (MQ=255) tttGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGACCATCTCCACCATCTCGTGGCCCACGCGTCGCATGCCTGCATAGGTGa > 7:167263/1‑149 (MQ=255) ttGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAAccacggcaaagccatgcccgccgggctcacgccgcagtatgtcaagcacatggtccgggaactgaacgtgggtgacagctacgcaaagtacctgcacac < 6:126342‑M2/149‑100 (MQ=255) ttGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGACCATCTCCACCATCTCGTGGCCCACGCGTCGCATGc < 4:218831/136‑1 (MQ=255) ttGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGACCATCTCCACCATCTCGTGGCCCACGCGTCGCATGc > 3:218831/1‑136 (MQ=255) tGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGACCATCTCCACCATCTCGTGGCCCACGCGTCGCATGCCTGCATAGGTGAc < 2:256047/148‑1 (MQ=255) ccGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAAccacggcaaagccatgcccgccgggctcacgccgcagtatgtcaagcacatggtccgggaactgaacgtgggtgacagctacgcaaagtacctgcacacc < 6:304035‑M2/147‑101 (MQ=255) ccGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAAccacggcaaagccatgcccgccgggctcacgccgcagtatgtcaagcacatggtccgggaactgaacgtgggtgacagctacgcaaagtacctgcacacc > 5:304035‑M2/1‑47 (MQ=255) tGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGACCATCTCCACCATCTCGTGGCCCACGCGTCGCATGCCTGCATAGGTGACATAGGa < 2:20983/149‑1 (MQ=255) cATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGACCATCTCCACCATCTCGTGGCCCACGCGTCGCATGCCt > 3:225697/1‑128 (MQ=255) cATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGACCATCTCCACCATCTCGTGGCCCACGCGTCGCATGCCt < 4:225697/128‑1 (MQ=255) aTGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGACCATCTCCACCATCTCGTGGCCCACGCGTCGCATGCCTGCATAGGTGACATAGGATgaga < 3:39602/149‑1 (MQ=255) aTGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGACCATCTCCACCATCTCGTGGCCCACGCGTCGCATGCCTGCATAGGTGACATAGGATgaga < 8:53845/149‑1 (MQ=255) ggATCCCCCGGGCAG‑TCAGCCAGTAGGCGGCATCGAACCCCGGCAAGTTCTTGAGGCCGCGCTCTTCGCGGGTGGTGATTTCCTCGACCATCACCCCCATCTCGTGGCCCACGCGTCGCATGCCTGCATAGGTGACATAGCATGCGAgg < 8:79237/149‑1 (MQ=255) aTCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGACCATCTCCACCATCTCGTGGCCCACGCGTCGCATGCCTGCATAGGTGACATAGGATGAGAGGGc > 5:198898/1‑149 (MQ=255) aCCCGGGCCG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGACCATCTCCACCATCTCGTGGCCCACGCGTCGCATGCCTGCATAGGTGACATAGGATGAGAGGGCg > 6:171715/1‑147 (MQ=255) cccGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGACCATCTCCACCATCTCGTGGCCCACGCGTCGCATGCCTGCATAGGTGACATAGGATGAGAGGGCGAAg < 6:198898/149‑1 (MQ=255) gggCAG‑TCAGCCAGTAGTCGGTATCGAAccacggcaaagccatgcccgccgggctcacgccgcagtatgtcaagcacatggtccgggaactgaacgtgggtgacagctacgcaaagtacctgcacacccaactcatcagttccagagca > 5:126342‑M2/1‑28 (MQ=255) gggCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGACCATCTCCACCATCTCGTGGCCCACGCGTCGCATGCCTGCATAGGTGACATAGGATGAGAGGGCGAAGGGa > 1:97088/1‑149 (MQ=255) cAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGACCATCACCACCATCTCGTGGCCCACGCGTCGCATGCCTGCATAGGTGACATAGGATGAGAGGGCGAAGGGATGc < 8:167263/149‑1 (MQ=255) gCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGACCATCTCCACCATCTCGTGGCCCACGCGTCGCATGCCTGCATAGGTGACAt < 4:134341/120‑1 (MQ=255) gCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGACCATCTCCACCATCTCGTGGCCCACGCGTCGCATGCCTGCATAGGTGACATAGGATGAGAGGGCGAAGGGATGCatgatg > 4:45913/1‑149 (MQ=255) gCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGACCATCTCCACCATCTCGTGGCCCACGCGTCGCATGCCTGCATAGGTGACATAGGATGAGAGGGCGAAGGGATGCatgatg < 1:108135/149‑1 (MQ=255) tCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCATCGACCATCTCCACCATCTCGTGGCCCACGCGTCGCATGCCTGCATAGGTGACATAGGATGAGAGGGCGAAGGGATGCATGATGGCGCCCGt > 5:149536/1‑149 (MQ=255) tATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGACCATCTCCACCATCTCGTGGCCCACGCGTCGCATGCCTGCATAGGTGACATAGGATGAGAGGGCGAAGGGATGCATGATGGCGCCCGTgcgg > 5:160487/1‑149 (MQ=255) tATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGACCATCTCCACCATCTCGTGGCCCACGCGTCGCATGCCTGCATAGGTGACATAGGATGAGAGGGCGAAGGGATGCATGATGGCGCCCGTgcgg > 7:72417/1‑149 (MQ=255) aCCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGACCATCTCCACCATCTCGTGGCCCACGCGTCGCATGCCTGCATAGGTGACATAGGATGAGAGGGCGAAGGGATGCAGGATGGCGCCCGTGCggcgggcg < 5:171715/149‑1 (MQ=255) | GTTGGGTGTGCAGGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAG‑TCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGACCATCTCCACCATCTCGTGGCCCACGCGTCGCATGCCTGCATAGGTGACATAGGATGAGAGGGCGAAGGGATGCATGATGGCGCCCGTGCGGCGGGCG > NC_002947/422597‑422889 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |