| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 549643 | 58 (1.070) | 3 (0.060) | 3/246 | NT | 5.5% | coding (318/1194 nt) | tufB | elongation factor Tu‑B |
| ? | NC_002947 | = 549666 | 49 (0.960) | coding (341/1194 nt) | tufB | elongation factor Tu‑B | |||||
AAGAAAAAGCGCGCGGTATCACCATCAACACCGCTCACGTCGAGTACAACTCGAACATTCGTCACTACGCTCACGTTGACTGCCCAGGTCACGCTGACTACGTGAAGAACATGATCACCGGTGCTGCCCAGATGGACGGCGCGATCCTGGTTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/549489‑549643‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtttgcGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGATCATGTTCTTCACGTAGTCAGCGTGACCTGGGCAGTCAACGTGAGCGTAGTGACGAATGTTCGAGTTGTACTCGACGTGAGCG < NC_002947/549666‑549520 AAGAAAAAGCGCGCGGTATCACCATCAACACCGCTCACGTCGAGTACAACTCGAACATTCGTCACTACGCTCACGTTGACTGCCCAGGTCACGCTGACTACGTGAAGAACATGATCACCGGTGCTGCCCAGATGGACGGCGCGATCCTG < 7:107762/149‑1 AAAATGCGGGCGGTATCACCATGAAGACCGCTCACGTCGAGTACAACTCGAACATTCGTCACTACGCTCACGTTTACTGCGCAGGTCACGCTGACTACGTGAAGAACATGATCACCGGTGCTGCCCAGATGGACGGCGCGATCCTGGTT < 4:300211/149‑1 AAGAGCGCGGTATCACCATCAACACCGCTCACGTCGAGTACAACACGAACATTCGTCACTACGCTCACGTTGACTGCCCAGGTCACGCTGACTACGTGAAGAACATGATCACAGGTGCTGCGCAGATGTACGGCGCGATCCTGGTTTGC > 4:59706/1‑149 CGTCGAGTACAACTCGAACATTCGTCACTACGCTCACGTTGACTGCCCAGGTCACGCTGACTACGTGAAGAACATGATCACCGGTGCTTCCCAGATGGACGGCGCGATCCTGGTTTGCGGCATCGGACCATCGGCGGCCGAGCAAACCA < 8:51228/149‑1 GTTGACTGCCCAGGTCACGCTGACTACGTGAAGAACATGATCACCGGTGCTGCCCAGATGGACGGCGCGATCCTGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAG < 7:99459/113‑1 GTTGACTGCCCAGGTCACGCTGACTACGTGAAGAACATGATCACCGGTGCTGCCCAGATGGACGGCGCGATCCTGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAG > 8:99459/1‑113 GGTTTGCGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGATCATGTTCTTCACGTAGTCAGCGTGACCTGGGCAGTCAACGTGAGCGTAGTGACGAATGTTCGAGTTGTACTCGACGT < 4:148288/149‑1 GGTTTGCGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGATCATGTTCTTCACGTAGTCAGCGTGACCTGGGCAGTCAACGTGAGCGTAGTGACGAATGTTCGAGTTGTACTCGACGT < 8:54520/149‑1 GGTTTGCGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGATC < 7:121539/73‑1 GGTTTGCGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTCGGCAGCACAGCTGATC > 8:121539/1‑73 CGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGATCATGTTCTTCACGTAGTCAGCGTGACCTGGGCAGTCAACGTGAGCGTAGTGACGAATGTTCGAGTTGTACTCGACGTGAGCG < 2:157630/148‑1 AAGAAAAAGCGCGCGGTATCACCATCAACACCGCTCACGTCGAGTACAACTCGAACATTCGTCACTACGCTCACGTTGACTGCCCAGGTCACGCTGACTACGTGAAGAACATGATCACCGGTGCTGCCCAGATGGACGGCGCGATCCTGGTTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/549489‑549643‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtttgcGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGATCATGTTCTTCACGTAGTCAGCGTGACCTGGGCAGTCAACGTGAGCGTAGTGACGAATGTTCGAGTTGTACTCGACGTGAGCG < NC_002947/549666‑549520 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |