New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 714073	58 (1.070)	4 (0.080)	4/244	NT	6.1%	coding (87/948 nt)	ispH	4‑hydroxy‑3‑methylbut‑2‑enyl diphosphate reductase
	?	NC_002947	= 714124	69 (1.360)					coding (138/948 nt)	ispH	4‑hydroxy‑3‑methylbut‑2‑enyl diphosphate reductase

AAGACCCTGACCTTCGAGGTGGAGATCCTCGAGGTGAAGGCCCTGTAAGCCTGGAGCCGAGCATGCAAATCAAACTCGCCAACCCTCGCGGCTTCTGCGCCGGGGTCGACCGGGCGATCGAGATCGTCAACCGCGCGCTGGAAGTCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/713925‑714073 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagtcttcCACCACGAACTTGTTGTGCACCACTTCGTGGCGCACATAGATCGGCGGGCCGAAGACTTCCAGCGCGCGGTTGACGATCTCGATCGCCCGGTCGACCCCGGCGCAGAAGCCGCGAGGGTTGGCGAGTTTGATTTGCATGCTCGGC  <  NC_002947/714124‑713980                                                                                                                                                                                                                                                                                                        AAGACCCTGACCTTCGAGGTGGAGATCCTCGAGGTGAAGGCCCTGTAAGCCTGGAGCCGAGCATGCAAATCAAACTCGCCAACCCTCGCGGCTTCTGCGCCGGGGTCGACCGGGCGATCGAGATCGTCAACCGCGCGCTGGAAGTCTTC                                                                                                                                                   >  5:144036/1‑149                      GAGATCCTCGAGGTGAAGGCCCTGTAAGCCTGGAGCCGAGCATGCAAATCAAACTCGCCAACCCTCGCGGCTTCTGCGCCGGGGTCGACCGGGCGATCGAGATCGTCAACCGCGCGCTGGAAGTCTTCCACCACGAACTTGTTGTGCAC                                                                                                                              >  5:259752/1‑149                                        GCCCTGTAAGCCTGGAGCCGAGCATGCAAATCAAACTCGCCAACCCTCGCGGCTTCTGCGCCGGGGTCGACCGGGCGATCGAGATCGTCAACCGCGCGCTGGAAGTCTTCCACCACGAACTTGTTGTGCACCACTTCGTGGCGCACA                                                                                                              >  2:55270/1‑147                                                               ATGCAAATCAAACTCGCCAACCCTCGCGGCTTCTGCGCCGGGGTCGACCGGGCGATCGAGATCGTCAACCGCGCGCTGGAAGTCTTCCACCACGAACTTGTTGTGCACCACTTCGTGGCGCACATAGATCGGCGGGCCGAAGACTTCCA                                                                                     <  6:259752/149‑1                                                                TGCAAATCAAACTCGCCAACCCTCGCGGCTTCTGCGCCGGGGTCGACCGGGCGATCGAGATCGTCAACCGCGCGCTGGAAGTCTTCCACCACGAACTTGTTGTGCACCACTTCGTGGCGCACATAGATCGGCGGGCCGAAGACTTCCAG                                                                                    <  1:55270/149‑1                                                                                                                                                GTCTTCCACCACGAACTTGTTGTGCACCACTTCGTGGCGCACATAGATCGGCGGGCCGAAGACTTCCAGCGCGCGGTTGACGATCTCGATCGCCCGGTCGACCCCGGCGCAGAAGCCGCGAGGGTTGGCGAGTTTGATTTGCATGCTCG    >  6:144036/1‑149                                                                                                                                                  CTTCCACCACGAACTTGTTGTGCACCACTTCGTGGCGCACATAGATCGGCGGGCCGAAGACTTCCAGCGCGCGGTTGACGATCTCGATCGCCCGGTCGACCCCGGCGCAGAAGCCGCGAGGGTTGGCGAGTTTGATTTGCATGCTCGGC  >  3:309326/1‑149                                                                                                                                                    TCCACCACGAACTTGTTGTGCACCACTTCGTGGCGCACATAGATCGGCGGGCCGAAGACTTCCAGCGCGCGGTTGACGATCTCGATCGCCCGGTCGACCCCGGCGCAGAAGCCGCGAGGGTT                           <  7:59113/122‑1                                                                                                                                                    TCCACCACGAACTTGTTGTGCACCACTTCGTGGCGCACATAGATCGGCGGGCCGAAGACTTCCAGCGCGCGGTTGACGATCTCGATCGCCCGGTCGACCCCGGCGCAGAAGCCGCGAGGGTT                           >  8:59113/1‑122                                                                                                                                                                                                                                                                                                        AAGACCCTGACCTTCGAGGTGGAGATCCTCGAGGTGAAGGCCCTGTAAGCCTGGAGCCGAGCATGCAAATCAAACTCGCCAACCCTCGCGGCTTCTGCGCCGGGGTCGACCGGGCGATCGAGATCGTCAACCGCGCGCTGGAAGTCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/713925‑714073 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagtcttcCACCACGAACTTGTTGTGCACCACTTCGTGGCGCACATAGATCGGCGGGCCGAAGACTTCCAGCGCGCGGTTGACGATCTCGATCGCCCGGTCGACCCCGGCGCAGAAGCCGCGAGGGTTGGCGAGTTTGATTTGCATGCTCGGC  <  NC_002947/714124‑713980

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.