New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 945056	59 (1.090)	3 (0.060)	3/250	NT	5.3%	coding (566/18933 nt)	PP_0806	surface adhesion protein
	?	NC_002947	= 945116	50 (0.960)					coding (506/18933 nt)	PP_0806	surface adhesion protein

GCTGTTGATCTGCGGCGCATTCAACGTCACGTTGAAGTTGCCGTCGGCACCCACTGTGCCGCTGCCGATCAGGTTGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/944977‑945056 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggATGGCTTGCGTCTGACCGGCCGTGGCGAAGCAGGCACCACGGTGAACATCCGCGACGCCGCCGGCAACCTGATCGGCAGCGGCACAGTGGGTGCCGACGGCAACTTCAACGTGACGTTGAATGCGCCGCAGATCAACAGCGAAAACCT  <  NC_002947/945116‑944969                                                                                                                                                                                                                                      GCTGTTGATCTGCGGCGCATTCAACGTCACGTTGAAGTTGCCGTCGGCACCCACTGTGCCGCTGCCGATCAGGTTGCCGGATGGCTTGCGTCTGACCGGCCGTGGCGAAGCAGGCACCACGGTGAACATCCGCGACGCCGCCGGCAACC                                                                                 <  2:82187/149‑1                 GCATTCAACGTCACGTTGAAGTTGCCGTCGGCACCCACTGTGCCGCTGCCGATCAGGTTGCCGGATGGCTTGCGTCTGACCGGCCGTGGCGAAGCAGGCACCACGGTGAACATCCGCGACGCCGCCGGCAAC                                                                                  >  7:46785/1‑132                 GCATTCAACGTCACGTTGAAGTTGCCGTCGGCACCCACTGTGCCGCTGCCGATCAGGTTGCCGGATGGCTTGCGTCTGACCGGCCGTGGCGAAGCAGGCACCACGGTGAACATCCGCGACGCCGCCGGCAAC                                                                                  <  8:46785/132‑1                                                                                GATGGCTTGCGTCTGACCGGCCGTGGCGAAGCAGGCACCACGGTGAACATCCGCGACGCCGCCGGCAACCTGATCGGCAGCGGCACAGTGGGTGCCGACGGCAACTTCAACGTGACGTTGAATGCGCCGCAGATCAACAGCGAAAACCT  >  4:33675/1‑149                                                                                                                                                                                                                                      GCTGTTGATCTGCGGCGCATTCAACGTCACGTTGAAGTTGCCGTCGGCACCCACTGTGCCGCTGCCGATCAGGTTGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/944977‑945056 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggATGGCTTGCGTCTGACCGGCCGTGGCGAAGCAGGCACCACGGTGAACATCCGCGACGCCGCCGGCAACCTGATCGGCAGCGGCACAGTGGGTGCCGACGGCAACTTCAACGTGACGTTGAATGCGCCGCAGATCAACAGCGAAAACCT  <  NC_002947/945116‑944969

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.