| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1027776 = | 48 (0.890) | 3 (0.060) | 3/250 | NT | 6.2% | coding (964/1626 nt) | dppA‑III | dipeptide ABC transporter substrate‑binding protein |
| ? | NC_002947 | 1027815 = | 45 (0.870) | coding (925/1626 nt) | dppA‑III | dipeptide ABC transporter substrate‑binding protein | |||||
GAGCCGCTAAAAGCCGACAAGAACCTGCAAATGCCGCAGCAGGCCGGTTTCAACCTCGGCTATATCGCCTACAACGTGATGGACAAGATCAAGGGCAGCAACGAGGCCAACCCCATGGCCCAGCTGAAAGTCCGACAGGCGCTGGACATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1027926‑1027776‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catggGGTTGGCCTCGTTGCTGCCCTTGATCTTGTCCATCACGTTGTAGGCGATATAGCCGA‑GGTTGAAACCGGCCTGCTGCGGCATTTGCAGGTTCTTGTCGGCTTTTAGCGGCTCGATGTCGGCCGGGCGTGGGAACAGGGTGACCTGG > NC_002947/1027815‑1027960 GAGCCGCTAAAAGCCGACAAGAACCTGCAAATGCCGCAGCAGGCCGGTTTCAACCTCGGCTATATCGCCTACAACGTGATGGACAAGATCAAGGGCAGCAACGAGGCCAACCCCATGGCCCAGCTGAAAGTCCGACAGGCGCTGGACA < 1:93401/148‑1 AGCCGCTAAAAGCCGACAAGAACCTGCAAATGCCGCAGCAGGCCGGTTTCAACCTCGGCTATATCGCCTACAACGTGATGGACAAGATCAAGGGCAGCAACGAGGCCAACCCCATGGCCCAGCTGAAAGTCCGACAGGCGCTGGACATG > 2:147376/1‑149 GCCGCTAAAAGCCGACAAGAACCTGCAAATGCCGCAGCAGGCCGGTTTCAACCTCGGCTATATCGCCTACAACGTGATTGACAAGATCAAGGGCAGCAACGAGGCCAACCCCATGGCCCAGCTGAAAGTCCGACAGGCGCTGGACATGG < 7:128537/149‑1 TAAAAGCCGACAAGAACCTGCAAATGCCGCAGCAGGCCGGTTTCAACCTCGGCTATATCGCCTACAACGTGATGGACAAGATCAAGGGCAGCAACGAGGCCAACCCCATGGCCCAGCTGAAAGTCCGACAGGCGCTGGACATG > 1:258479/1‑143 TAAAAGCCGACAAGAACCTGCAAATGCCGCAGCAGGCCGGTTTCAACCTCGGCTATATCGCCTACAACGTGATGGACAAGATCAAGGGCAGCAACGAGGCCAACCCCATGGCCCAGCTGAAAGTCCGACAGGCGCTGGACATG < 2:258479/143‑1 CCCCATGGCCCAGCTGAAAGTCCGACAGGCGCTGGACATGGGGTTGGCCTCGTTGCTGCCCTTGATCTTGTCCATCACGTTGTAGGCGATATAGACGA‑GGTTGAAACCGGCCTGCTGAGGCATTTGCAGGTTCTTGTCGGCTTTTAGCG > 6:213001/1‑149 CCATGGCCCAGCTGAAAGTCCGACAGGCGCTGGACATGGGGTTGGCCTCGTTGCTGCCCTTGATCTTGTCCATCACGTTGTAGGCGATATAGCCGA‑GGTTGAAACCGGCCTGCTGCGGCATTTGCAGGTTCTTGTCGGCTTTTAGCGGC > 5:52570/1‑149 CATGGCCCAGCTGAAAGTCCGATAGGCGCTGGACATGGGGTTGGCCTCGTTGCTGCCCTTGATCTTGTCCATCACGTTGTAGGCGATATAGCCGA‑GGTTGAAACCGGCCTGCTGCGGCATTTGCAGGTTCTTGTCGGCTTTTAGCGGCT > 4:127234/1‑149 CATGGGGTTGGCCTCGTTGCTGCCCTTGATCTTGTCCATCACGTTGTAGGCGATATAGCCGA‑GGTTGAAACCGGCCTGCTGCGGCATTTGCAGGTTCTTGTCGGCTTTTAGCGGCTCGATGTCGGCCGGGCGTGGGAACAGGGTGACCT > 5:24301/1‑149 ATGGGGTTGGCCTCGTTGCTGCCCTTGATCTTGTCAATCACGTTGTAGGCGATATAGCCGAGGGTTGAAACCGCCCTGCTGCGGCATTTGCAGGTTGTTGTCGGCTTTTAGCGGAACGATGTCGGCCGGGCGTGGGAACAGGGTGACgt > 1:99682/1‑147 TGGGGTTGGCCTCGTTGCTGCCCTTGATCTTGTCCATCACGTTGTAGGCGATATAGCCGA‑GGTTGAAACCGGCCTGCTGCGGCATTTGCAGGTTCTTGTCGGCTTTTAGCGGCTCGATGTCGGCCGGGCGTGGGAACAGGGTGACCTGG < 6:52570/149‑1 GAGCCGCTAAAAGCCGACAAGAACCTGCAAATGCCGCAGCAGGCCGGTTTCAACCTCGGCTATATCGCCTACAACGTGATGGACAAGATCAAGGGCAGCAACGAGGCCAACCCCATGGCCCAGCTGAAAGTCCGACAGGCGCTGGACATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1027926‑1027776‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catggGGTTGGCCTCGTTGCTGCCCTTGATCTTGTCCATCACGTTGTAGGCGATATAGCCGA‑GGTTGAAACCGGCCTGCTGCGGCATTTGCAGGTTCTTGTCGGCTTTTAGCGGCTCGATGTCGGCCGGGCGTGGGAACAGGGTGACCTGG > NC_002947/1027815‑1027960 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |