| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1027776 = | 48 (0.890) | 3 (0.060) | 3/250 | NT | 6.2% | coding (964/1626 nt) | dppA‑III | dipeptide ABC transporter substrate‑binding protein |
| ? | NC_002947 | 1027815 = | 45 (0.870) | coding (925/1626 nt) | dppA‑III | dipeptide ABC transporter substrate‑binding protein | |||||
TTGAGCAGTTGCTTGGCTTTCTCGGGGTCAAAGGCGGCGTCCTTGATGCTGTCGTCATAGGACCACTGCGTGGGC‑GGCATGGCGTTGACCGCCAGCTGGCCGGCGCCCTGGTACACCGACTCGATGATCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTGGCCTCGTTGCTGCCCTTGATCTTGTCCATCACGTTGTAGGCGATATAGCCGAGGTTGAAACCGGCCTGCTGCGGCATTTGCAGGTTCTTGTCGGCTTTTAGCGGC > NC_002947/1027631‑1027924 | ccaggtcaccctgttcccacgcccggccgacatcgagccgctaaaagccgacaagaacctgcaaatgccgcagcaggccggtttcaacctcggctatatcgcctacaacgtgatggacaagatcaagggcagcaacgaggccaaccCCa < 6:52570‑M1/3‑1 (MQ=255) acgtcaccctgttcccacgcccggccgacatcgttccgctaaaagccgacaacaacctgcaaatgccgcagcagggcggtttcaaccctcggctatatcgcctacaacgtgattgacaagatcaagggcagcaacgaggccaaccCCAt > 1:99682‑M1/146‑149 (MQ=255) aggtcaccctgttcccacgcccggccgacatcgagccgctaaaagccgacaagaacctgcaaatgccgcagcaggccggtttcaacctcggctatatcgcctacaacgtgatggacaagatcaagggcagcaacgaggccaaccCCATg > 5:24301‑M1/145‑149 (MQ=255) cTTTCTCGGGGTCAAAGGCGGCGTCCTTGATGCTGTCGTCATAGGACCACTGCGTGGGC‑GGCATGGCGTTGACCGCCAGCTGGCCGGCGCCCTGGTACACCGACTCGATGATCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCg > 1:221130/1‑148 (MQ=255) tttCTCGGGGTCAAAGGCGGCGTCCTTGATGCTGTCGTCATAGGACCACTGCGTGGGC‑GGCATGGCGTTGACCGCCAGCTGGCCGGCGCCCTGGTACACCGACTCGATGATCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGa > 4:132871/1‑149 (MQ=255) tccgggTCAAAGGCGGCGTCCTTGATCCTGTCGTCATAGGACCACTGCGTGGGC‑GGCATGGCGTTGACCGCCAGCTGGCCGGCGCCCTGGTACACCGACTCGATGATCTTTATCTTGACCACGGCCATGTCAAGCGCCTTTCGGACttt > 2:231700/4‑149 (MQ=25) tCAAAGGCGGCGTCCTTGATGCTGTCGTCATAGGACCACTGCGTGGGCGGGCATGGCGTTGACCGCCAGCTGGCCGGCGCCCTGGTACACCGACTCGATGATCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCt > 1:258714/1‑149 (MQ=255) tCAAAGGCGGCGTCCTTGATGCTGTCGTCATAGGACCACTGCGTGGGC‑GGCATGGCGTTGACCGCCAGCTGGCCGGCGCCCTGGTACACCGACTCGATGATCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTg > 5:9132/1‑149 (MQ=255) aaaGGCGGCGTCCTTGATGCTGTCGTCATAGGACCACTGCGTGGGC‑GGCATGGCGTTGACCGCCAGCTGGCCGGCGCCCTGGTACACCGACTCGATGATCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTggg < 7:159487/149‑1 (MQ=255) aaaGGCGGCGTCCTTGATGCTGTCGTCATAGGACCACTGCGTGGGC‑GGCATGGCGTTGACCGCCAGCTGGCCGGCGCCCTGGTACACCGACTCGATGATCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTgg < 1:233216/148‑1 (MQ=255) aaaGGCGGCGTCCTTGATGCTGTCGTCATAGGACCACTGCGTGGGC‑GGCATGGCGTTGACCGCCAGCTGGCCGGCGCCCTGGTACACCGACTCGATGATCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTgg > 2:233216/1‑148 (MQ=255) agccgctaaaagccgacaagaacctgcaaatgccgcagcaggccggtttcaacctcggctatatcgcctacaacgtgatggacaagatcaagggcagcaacgaggccaaccCCATGTCCAGCGCCTATCGGACTTTCAGCTGGGCCATg > 4:127234‑M1/112‑149 (MQ=255) gccgctaaaagccgacaagaacctgcaaatgccgcagcaggccggtttcaacctcggctatatcgcctacaacgtgatggacaagatcaagggcagcaacgaggccaaccCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATgg > 5:52570‑M1/111‑149 (MQ=255) cgctaaaagccgacaagaacctgcaaatgcctcagcaggccggtttcaacctcgtctatatcgcctacaacgtgatggacaagatcaagggcagcaacgaggccaaccCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATgggg > 6:213001‑M1/109‑149 (MQ=255) cTTGATGCTGTCGTCATAGGACCACTGCGTGGGC‑GGCATGGCGTTGACCGCCAGCTGGCCGGCGCCCTGGTACACCGACTCGATGATCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTgg > 4:140631/1‑149 (MQ=255) cTTGATGCTGTCGTCATAGGACCACTGCGTGGGC‑GGCATGGCGTTGACCGCCAGCTGGCCGGCGCCCTGGTACACCGACTCGATGATCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTg < 2:221130/148‑1 (MQ=255) cTTGATGCTGTCGTCATAGGACCACTGCGTGGGC‑GGCATGGCGTTGACCGCCAGCTGGCCGGCGCCCTGGTACACCGACTCGATGATCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTg < 3:132871/148‑1 (MQ=255) gATGCTGTCGTCATAGGACCACTGCGTGGGC‑GGCATGGCGTTGACCGCCAGCTGGCCGGCGCCCTGGTACACCGACTCGATGATCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGTCCATgggg < 7:223743/142‑1 (MQ=255) gATGCTGTCGTCATAGGACCACTGCGTGGGC‑GGCATGGCGTTGACCGCCAGCTGGCCGGCGCCCTGGTACACCGACTCGATGATCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATgggg > 8:223743/1‑142 (MQ=255) cTGTCGTCATAGGACCACTGCGTGGGC‑GGCATGGCGTTGACCGCCAGCTGGCCGGCGCCCTGGTACACCGACTCGATGATCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTGGCCTCGtt > 5:155931/1‑149 (MQ=255) tGTCGTCATAGGACCACTGCGTGGGC‑TGCATCTCGTTGACCGCCAGCATGACGGCGCCCTGGTACACCGACACGATGATCTTTTTCTTGTCAACGGCCAt > 1:166530/1‑100 (MQ=25) tcgtcATAGGACCACTGCGTGGGC‑GGCATGGCGTTGACCGCCAGCTGGCCGGCGCCCTGGTACACCGACTCGATGATCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTg < 8:177755/138‑1 (MQ=255) tcgtcATAGGACCACTGCGTGGGC‑GGCATGGCGTTGACCGCCAGCTGGCCGGCGCCCTGGTACACCGACTCGATGATCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTg > 7:177755/1‑138 (MQ=255) gtcATAGGACCACTGCGTGGGC‑GGCATGGCGTTGACCGCCAGCTGGCCGGCGCCCTGGTACACCGACTCGATGATCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTGGCCTCGTtgctg < 6:9132/148‑1 (MQ=255) aTAGGACCACTGCGTGGGC‑GGCATGGCGTTGACCGCCAGCTGGCCGGCGCCCTGGTACACCGACTCGATGATCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTGGCCTCGTTGCTGCCCt < 6:155931/149‑1 (MQ=255) aTAGGACCACTGCGTGGGC‑GGCATGGCGTTGACCGCCAGCTGGCCGGCGCCCTGGTACACCGACTCGATGATCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTGGCCTCGTTGCTGCCCt > 2:25019/1‑149 (MQ=255) gACCACTGCGTGGGC‑GGCATGGCGTTGACCGCCAGCTGGCCGGCGCCCTGGTACACCGACTCGATGATCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTg < 4:252697/129‑1 (MQ=255) gACCACTGCGTGGGC‑GGCATGGCGTTGACCGCCAGCTGGCCGGCGCCCTGGTACACCGACTCGATGATCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTg > 3:252697/1‑129 (MQ=255) aCTGCGTGGGC‑GGCATGGCGTTGACCGCCAGCTGGCCGGCGCCCTGGTACACCGACTCGATGATCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTGGCCTCGTTGCTGCCCTTGATc < 8:125134/146‑1 (MQ=255) aCTGCGTGGGC‑GGCATGGCGTTGACCGCCAGCTGGCCGGCGCCCTGGTACACCGACTCGATGATCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTGGCCTCGTTGCTGCCCTTGATc > 7:125134/1‑146 (MQ=255) ggc‑ggcATGGCGTTGACCGCCAGCTGGCCGGCGCCCTGGTACACCGACTCGATGATCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTGGCCTCGTTGCTGCCCTTGATCTTGTCCATCa < 2:258714/148‑1 (MQ=255) c‑ggcATGGCGTTGACCGCCAGCTGGCCGGCGCCCTGGTACACCGACTCGATGATCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTGGCCTCGTTGCTGCCCTTGATCTTGTCCATCACGt > 7:81437/1‑149 (MQ=255) ctGGCGGTCAACGCCAGCTGGCCGGCGCCCTGGTACACCGACTCGATGATCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTGGCCTCGTTGCTGCCCTTGATCTTGTCCATCACGTTg > 4:311339/2‑147 (MQ=255) ccAGCTGGCCGGCGCCCTGGTACACCGACTCGATGATCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTGGCCTCGTTGCTGCCCTTGATCTTGTCCATCACGTTGTAGGCGATATAGcc > 2:342525/1‑148 (MQ=255) cTGGCCGGCGCCCTGGTACACCGACTCGATGATCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTGGCCTCGTTGCTGCCCTTGATCTTGTTCATCACGTTGTAGGCGATATAGCCGAGGt < 1:25019/149‑1 (MQ=255) gCCGGCGCCCTGGTACACCGACTCGATGATCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTGGCCTCGTTGCTGCCCTTGAGCTTGTCCATCACGTTGTAGGCGATATAGCCGAGGTTg > 3:260907/1‑148 (MQ=255) cGGCGCCCTGGTACACCGACTCGATGATCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTGGCCTCGTTGCTGCCCTTGATCTTGTCCATCACGTTGTAGGCGATATAGCCGAGGTTGaaa > 6:198861/1‑149 (MQ=255) tACACCGACTCGATGATCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTGGCCTCGTTGCTGCCCTTGATCTTGTCCATCACGTTGTAGGCGATATAGCCGAGGTTGAAACCGGCctgctg < 4:260907/149‑1 (MQ=255) acCGACTCGATGATCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTGGCCTCGTTGCTGCCCTTGATCTTGTCCATCCCGTTGTAGGCGATATAGCCGAGGTTGAAACCGGCCTGCTGCgg > 8:167041/1‑149 (MQ=255) cGACTCGATGATCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTggg > 4:145127/1‑62 (MQ=255) cGACTCGATGATCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTggg < 3:145127/62‑1 (MQ=255) cGACTCGATGATCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTGGCCTCGTTGCTGCCCTTGATCTTGTCCATCACGTTGt < 4:41060/110‑1 (MQ=255) cGACTCGATGATCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTGGCCTCGTTGCTGCCCTTGATCTTGTCCATCACGTTGt > 3:41060/1‑110 (MQ=255) gatgatCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTGTCCTCGTTGCTGCCCTTGATCTTGTCCATCACGTTGTAGGCGATATAGCCGAGGTTGAAACCGGCCTGCTGCGGCATTTg > 8:307402/1‑147 (MQ=255) gatgatCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTGGCCTCGTTGCTGCCCTTGATCTTGTCCATCACGTTGTAGGCGATATAGCCGAGGTTGAAACCGGCCTGCTGCGGCATTTg > 8:302936/1‑147 (MQ=255) gatgatCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTGGCCTCGTTGCTGCCCTTGATCTTGTCCATCACGTTGTAGGCGATATAGCCGAGGTTGAAACCGGCCTGCTGCGGCATTTGc < 1:342525/148‑1 (MQ=255) gatCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTGGCCTCGTTGCTGCCCTTGATCTTGTCCATCACGTTGTAGGCGATATAGCCGAGGTTGAAACCGGCCTGCTGCGGCATTTGCAGGt > 2:142899/1‑149 (MQ=255) atCTTTTTCTTGTCCACCGCCATGTCCAGCGCCTGTCGGAGTTTCAGCTGGGCCATGGGGTTGGCCTCGTTGCTGCCCTTGATCTTGTCCATCACGTTGTAGGCGATATAGCCGAGGTTGAAACCGGCCTGCTGCGGCATTTGCAGGtt < 8:81437/149‑1 (MQ=255) tttttCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTGGCCTCGTTGCTGCCCTTGATCTTGTCCATCACGTTGTAGGCGATATAGCCGAGGTTGAAACCGGCCTGCTGCGGCATTTGCAGGTTCtt > 5:322864/1‑149 (MQ=255) tttttCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTGGCCTCGTTGCTGCCCTTGATCTTGTCCATCACGTTGTAGGCGATATAGCCGAGGTTGAAACCGGCCTGCTGCGGCATTTGCAGGTTCtt > 2:205207/1‑149 (MQ=255) tttCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTGGCCTCGTTGCTGCCCTTGATCTTGTCCATCACGTTGTAGGCGATATAGCCGAGGTTGAAACCGGCCTGCTGCGGCATTTGCAGGTTCTTGt > 1:71779/1‑149 (MQ=255) tttCTTGTCCACGGCCATGTCCAGCGACTGTCGGACTTTCAGCTGGTCCATGGGGTTGGCCTCGTTGCGGCCCTTGATCTTGTCCATCACGTTGTAGGCGATATAGCCGAGGTTGAAACCGGCCTGCTGCGGCATTTGCAGGTTCtt < 1:281921/147‑1 (MQ=255) ttCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTGGCCTCGTTGCTGCCCTTGATCTTGTCCATCACGTTGTAGGCGATATAGCCGAGGTTGAAACCGGCCTGCTGCGGCATTTGCAGGTTCTTGt < 2:71779/148‑1 (MQ=255) ttGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTGGCCTCGTTGCTGCCCTTGATCTTGTCCATCACGTTGTAGGCGATATAGCCGAGGTTGAAACCGGCCTGCTGCGGCATTTGCAGGTTCTTGTCGGc > 3:175161/1‑149 (MQ=255) ttGTACACGGCCATGTCCAGCGCCTGTCGTACTTTCAGCTGGGCCATGTGTTTGGCCTCGTTGCTGCCCTTGATCTTGTCCATCACGTTTTAGGCGATAAAGCCGAGGTTGAAACCTGCCTGCTGCGGCATTTGCAGGTTCTTGTCGGc < 6:322864/149‑1 (MQ=255) cACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTGGCCTCGTTGCTGCACTTGATCTTGTCCATCACGTTGTAGGCTATATAGCCGAGGTTGAAACAGGCCTGCTGCTGCATTTGAACGTTCTTGTCGGCttt > 6:199152/1‑147 (MQ=255) aCGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTGGCCTCGTTGCTGCCCTTGATCTTGTCCATCACGTTGTAGGCGATATAGCCGAGGTTGAAACCGGCCTGCTGCGGCATTTGCAGGTTCTTGTCGGCTTTTAg > 2:147740/1‑149 (MQ=255) aCGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTGGCCTCGTTGCTGCCCTTGATCTTGTCCATCACGTTGTAGGCGATATAGCCGAGGTTGAAACCGGCCTGCTGCGGCATTTGCAGGTTCTTGTCGGCTTTTAg > 1:147376/1‑149 (MQ=255) CCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTGGCCTCGTTGCTGCCCTTGATCTTGTCAATCACGTTGTAGGCGATATAGCCGAGGTTGAAACCGGCCTGCTGCGGCATTTGCAGGTTCTTGTCGGCTTTTAGCGGc < 7:128537‑M1/149‑1 (MQ=255) | TTGAGCAGTTGCTTGGCTTTCTCGGGGTCAAAGGCGGCGTCCTTGATGCTGTCGTCATAGGACCACTGCGTGGGC‑GGCATGGCGTTGACCGCCAGCTGGCCGGCGCCCTGGTACACCGACTCGATGATCTTTTTCTTGTCCACGGCCATGTCCAGCGCCTGTCGGACTTTCAGCTGGGCCATGGGGTTGGCCTCGTTGCTGCCCTTGATCTTGTCCATCACGTTGTAGGCGATATAGCCGAGGTTGAAACCGGCCTGCTGCGGCATTTGCAGGTTCTTGTCGGCTTTTAGCGGC > NC_002947/1027631‑1027924 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |