| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1151173 = | 53 (0.980) | 5 (0.100) | 5/248 | NT | 10.9% | intergenic (‑162/‑103) | gapA/edd | glyceraldehyde‑3‑phosphate dehydrogenase/phosphogluconate dehydratase |
| ? | NC_002947 | 1151229 = | 31 (0.600) | intergenic (‑218/‑47) | gapA/edd | glyceraldehyde‑3‑phosphate dehydrogenase/phosphogluconate dehydratase | |||||
TTGTAAGGGCGGTTTACCGAGCATTTCCCCTCCAAACGATTGCGGCCTAGGCTCATGGTTAGGAGCCCGCTGCATCGGTGGAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1151256‑1151173‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggaggGGAAATGCTCGGTAAACCGCCCTTACAATTAGCCTGGAGTCCAGTACATGCATCCGCGCATCCTTGAGGTCACCCAGCGGCTGGTCGAACGCAGCCGCGCCACCCGCGAACGCTACCTGCAACTGATTCGCGGCGCGGCCAGT > NC_002947/1151229‑1151371 TTGTAAGGGCGGTTTACCGAGCATTTCCCCTCCAAACGATTGCGGCCTAGGCTCATGGTTAGGAGCCCGCTGCATCGGT > 1:339935/1‑79TTGTAAGGGCGGTTTACCGAGCATTTCCCCTCCAAACGATTGCGGCCTAGGCTCATGGTTAGGAGCCCGCTGCATCGGT < 2:339935/79‑1 ATTTCCCCTCCAAACGATTGCGGCCTAGGCTCATGGTTAGGAGCCCGCTGCATCGGTGGAGGGGAAATGCTCGGTAAACCGCCCTTACAATTAGCCTGGAGTCCAGTACATGCATCCGCGCATCCTTGAGGTCACCCAGCGGCTGGTC > 8:244164/1‑148 TTTCCCCTCCAAACGATTGCGGCCTAGGCTCATGGTTAGGAGCCCGCTGCATCGGTGGAGGGGAAATGCTCGGTAAACCGCCCTTACAATTAGCCTGGAGTCCAGTACATGCATCCGCGCATCCTTGAGGTCACCCAGCGGCTGGTCG > 7:156889/1‑148 CCCCTCCAAACGATTGCGGCCTAGGCTCATGGTTAGGAGCCCGCTGCATCGGTGGAGGGGAAATGCTCGGTAAACCGCCCTTACAATTAGCCTGGAGTCCAGTACATGCATCCGCGCATCCTTGAGGTCACCCAGCGGCTGGTCGAACG > 4:295079/1‑149 GATTGCGGCCTAGGCTCATGGTTAGGAGCCCGCTGCATCGGTGGAGGGGAAATGCTCGGTAAACCGCCCTTACAATTAGCCTGGAGTCCAGTACATGCATCCGCGCATCCTTGAGGTCACCCAGCGGCTGGTCGAACGCAGCCGCGCCA < 3:295079/149‑1 CATCGGTGGAGGGGAAATGCTCGGTAAACCGCCCTTACAATTAGCCTGGAGTCCAGTACATGCATCCGCGCATCCTTGAGGTCACCCAGCGGCTGGTCGAACGCAGCCGCGCCACCCGCGAACGCTACCTGCAACTGATTCGCGGCGC < 8:156889/148‑1 GGAGGGGAAATGCTCGGTAAACCGCCCTTACAATTAGCCTGGAGTCCAGTACATGCATCCGCGCATCCTTGAGGTCACCCAGCGGCTGGTCGAACGCAGCCGCGCCACCCGCGAACGCTACCTGCAACTGATTCGCGGCGCGGCCAGT < 1:252336/148‑1 AGGGGAAATGCTCGGTAAACCGCCCTTACAATTAGCCTGGAGTCCAGTACATGCATCCGCGCATCCTTGAGGTCACCCATCGGCTGTTCGAACGCAGCCTCGCCACCCGCGAACGCTACCTGCAACTGAT < 1:137292/130‑1 TTGTAAGGGCGGTTTACCGAGCATTTCCCCTCCAAACGATTGCGGCCTAGGCTCATGGTTAGGAGCCCGCTGCATCGGTGGAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1151256‑1151173‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggaggGGAAATGCTCGGTAAACCGCCCTTACAATTAGCCTGGAGTCCAGTACATGCATCCGCGCATCCTTGAGGTCACCCAGCGGCTGGTCGAACGCAGCCGCGCCACCCGCGAACGCTACCTGCAACTGATTCGCGGCGCGGCCAGT > NC_002947/1151229‑1151371 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |