| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1383831 = | 50 (0.920) | 3 (0.060) | 3/248 | NT | 5.2% | coding (1200/1716 nt) | proS | proline‑‑tRNA ligase |
| ? | NC_002947 | 1383898 = | 61 (1.180) | coding (1133/1716 nt) | proS | proline‑‑tRNA ligase | |||||
CTCGGTTGCCCTGATGAGCGACTTCGGCATCGGCGCCAACATCGACGACAAGCACTACTTCGGCGTCAACTGGGAGCGCGACCTGCCGGTGCCACAGGTTGCCGACCTGCGTAACGTGGTCGAAGGCGACCCAAGCCCGGACGGCCAGGGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1383984‑1383831‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaccGGCAGGTCGCGCTCCCAGTTGACGCCGAAGTAGTGCTTGTCGTCGATGTTGGCGCCGATGCCGAAGTCGCTCATCAGGGCAACCGAGCGGTCGATGATGATTTCCAGTGGCAGGTTGAGCGGGCCGAGCGAGCCGGCGCCGGCGC > NC_002947/1383898‑1384042 CTCGGTTGCCCTGATGAGCGACTTCGGCATCGGCGCCAACATCGACGACAAGCACTACTTCGGCGTCAACTGGGAGCGCGACCTGCCGGTGCCACAGGTTGCCGACCTGCGTAACGTGGTCGAAGGCGACCCAAGCCCGGACGGCCAGG > 3:300645/1‑149CTCGGTTGCCCTGATGAGCGACTTCGGCATCGGCGCCAACATCGACGACAAGCACTACTTCGGCGTCAACTGGGAGCGCGACCTGCCGGTGCCACAGGTTGCCGACCTGCGTAACGTGGTCGAAGGCGACCCAAGCCCGGACGGCCAGG > 7:183732/1‑149 GGTTGCCCTGATGAGCGACTTCGGCATCGGCGCCAACATCGACGACAAGCACTACTTCGGCGTCAACTGGGAGCGCGACCTGCCGGTGCCACAGGTTGCCGACCTGCGTAACGTGGTCGAAGGCGACCCAAGCCCGGACGGCCAGGGC < 6:158113/148‑1 CGACAAGCACTACTTCGGCGTCAACTGGGAGCGCGACCTGCCGGTGCCACAGGTTGCCGACCTGCGTAACGTGGTCGAAGGCGACCCAAGCCCGGACGGCCAGGGC > 3:127188/1‑106 CGACAAGCACTACTTCGGCGTCAACTGGGAGCGCGACCTGCCGGTGCCACAGGTTGCCGACCTGCGTAACGTGGTCGAAGGCGACCCAAGCCCGGACGGCCAGGGC < 4:127188/106‑1 CTGCCGGTGCCACAGGTTGCCGACCTGCGTAACGTGGTCGAAGGCGACCCAAGCCCGGACGGCCAGGGCACCGGCAGGTCGCGCTCCCAGTTGACGCCGAAGTAGTGCTTGTCGTCGATGTTGGCGCCGATGCCGAAGTCGCTCATCAG > 7:138861/1‑149 CCGGTGCCACAGGTTGCCGACCTGCGTAACGTGGTCGAAGGCGACCCAAGCCCGGACGGCCAGGGCACCGGCAGGTCGCGCTCCCAGTTGACGCCGAAGTAGTGCTTGTCGTCGATGTTGGCGCCGATGCCG > 1:59722/1‑132 CCGGTGCCACAGGTTGCCGACCTGCGTAACGTGGTCGAAGGCGACCCAAGCCCGGACGGCCAGGGCACCGGCAGGTCGCGCTCCCAGTTGACGCCGAAGTAGTGCTTGTCGTCGATGTTGGCGCCGATGCCG < 2:59722/132‑1 ACCGGCAGGTCGCGCTCCCAGTTGACGCCGAAGTAGTGCTTGTCGTCGATGTTGGCGCCGATGCCGAAGTCGCTCATCAGGGCAACCGAGCGGTCGATGATGATTTCCAGTGGCAGGTTGAGCGGGCCGAGCGAGCCGGCGCCGGCGC > 1:205175/1‑148 CTCGGTTGCCCTGATGAGCGACTTCGGCATCGGCGCCAACATCGACGACAAGCACTACTTCGGCGTCAACTGGGAGCGCGACCTGCCGGTGCCACAGGTTGCCGACCTGCGTAACGTGGTCGAAGGCGACCCAAGCCCGGACGGCCAGGGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1383984‑1383831‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaccGGCAGGTCGCGCTCCCAGTTGACGCCGAAGTAGTGCTTGTCGTCGATGTTGGCGCCGATGCCGAAGTCGCTCATCAGGGCAACCGAGCGGTCGATGATGATTTCCAGTGGCAGGTTGAGCGGGCCGAGCGAGCCGGCGCCGGCGC > NC_002947/1383898‑1384042 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |