New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1425073 =	52 (0.960)	6 (0.120)	5/248	NT	9.5%	coding (294/768 nt)	PP_1248	LysE family transporter
	?	NC_002947	1425134 =	65 (1.260)					coding (233/768 nt)	PP_1248	LysE family transporter

GAACTCACCATGCTTGGCGTCACCGACTACGGCGCATTCGTCATCGCCTTCCTCATTCTTCTGGCCATCCCCGGCCCGGGCAATTTCGCCCTGATCACCGCCACCGGCAAGGGCGGTATCAAGGCAGGCCTGGCCGCGACCTGTGGCGTGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1425225‑1425073 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgatcAGGGCGAAATTGCCCGGGCCGGGGATGGCCAGAAGAATGAGGAAGGCGATGACGAATGCGCCGTAGTCGGTGACGCCAAGCATGGTGAGTTCCTGTTGGGCATTGCGAAGGCAGTGCTCTGAA  >  NC_002947/1425134‑1425256                                                                                                                                                                                                                                                                                      GAACTCACCATGCTTGGCGTCACCGACTACGGCGCAATCGTCATCGCGTTCCTCATTCTTCTGGCCATCACCGGCCCGGGCAATTTCGCACTGATCTCCGCCACCGGCAAGGGCGGTATCAAGGCAGGCCTGGCCGAGCCCTGTGGCGT                                                                                                                                 >  3:231723/1‑149                                                                                          CCTGATCACCGCCACCGGCAAGGGCGGTATCAAGGCAGGCCTGGCCGCGACCTGTGGCGTGATCAGGGCGAAATTGCCCGGGCCGGGGATGGCCAGAAGAATGAGGAAGGCGATGACGAATGCGCCGTAGTCGGTGACGCCAAGCATGG                                        >  1:69622/1‑149                                                                                          CCTGATCACCGCCACCGGCAAGGGCGGTATCAAGGCAGGCCTGGCCGCGACCTGTGGCGTGATCAGGGCGAAATTGCCCGGGCCGGGGATGGCCAGAAGAATGAGGAAGGCGATGACGAATGCGCCGTAGTCGGTGACGCCAAGCATGG                                        >  5:92945/1‑149                                                                                           CTGATCACCGCCACCGGCAAGGGCGGTATCAAGGCAGGCCTGGCCGCGACCTGTGGCGTGATCAGGGCGAAATTGCCCGGGCCGGGGATGGCCAGAAGAATGAGGAAGGCGATGACGATTGCGCCGTAGTCGGTGACGCCAAGCATGGT                                       <  1:27272/149‑1                                                                                           CTGATCACCGCCACCGGCAAGGGCGGTATCAAGGCAGGCCTGGCCGCGACCTGTGGCGTGATCAGGGCGAAATTGCCCGGGCCGGGGATGGCCAGAAGAATGAGGAAGGCGATGACGAATGCGCCGTAGTCGGTGACGCCAAGCATGGT                                       >  2:27272/1‑149                                                                                                        CCGGCAAGGGCGGTATCAAGGCAGGCCTGGCCGCGACCTGTGGCGTGATCAGGGCGAAATTGCCCGGGCCGGGGATGGCCAGAAGAATGAGGAAGGCGATGACGAATGCGCCGTAGTCGGTGACGCCAAGCATGGTGAGTTCCTGTTGG                          <  6:92945/149‑1                                                                                                                                GCCTGGCCGCGACCTGTGGCGTGATCAGGGCGAAATTGCCCGGGCCGGGGATGGCCAGAAGAATGAGGAAGGCGATGACGAATGCGCCGTAGTCGGTGACGCCAAGCATGGTGAGTTCCTGTTGGGCATTGCGAAGGCAGTGCTCTGAA  <  2:69622/149‑1                                                                                                                                                                                                                                                                                      GAACTCACCATGCTTGGCGTCACCGACTACGGCGCATTCGTCATCGCCTTCCTCATTCTTCTGGCCATCCCCGGCCCGGGCAATTTCGCCCTGATCACCGCCACCGGCAAGGGCGGTATCAAGGCAGGCCTGGCCGCGACCTGTGGCGTGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1425225‑1425073 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgatcAGGGCGAAATTGCCCGGGCCGGGGATGGCCAGAAGAATGAGGAAGGCGATGACGAATGCGCCGTAGTCGGTGACGCCAAGCATGGTGAGTTCCTGTTGGGCATTGCGAAGGCAGTGCTCTGAA  >  NC_002947/1425134‑1425256

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.