New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1507992 = | 58 (1.070) | 3 (0.060) | 3/250 | NT | 5.7% | coding (393/462 nt) | sspB | ClpXP protease specificity‑enhancing factor |
? | NC_002947 | 1508041 = | 43 (0.830) | coding (442/462 nt) | sspB | ClpXP protease specificity‑enhancing factor |
GCTGTTCGAGTACATCGATTGACTCAGTGATTGCCTGGACAGGCCAAACAAAAAAGGCGATCCATCCGGATCGCCTTTTTTTGTTACTTGACCACTTTCAGGCTTGGCCGGCCAGTCGGACGCGGCGGCTGCCCTCCATCGTCTGGCGGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1508144‑1507992 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGG > NC_002947/1508041‑1508184 GCTGTTCGAGTACATCGATTGACTCAGTGATTGCCTGGACAGGCCAAACAAAAAAGGCGATCCATCCGGATCGCCTTTTTTTGTTACTTGACCACTTTCAGGCTTGGCCGGCCAGTCGGACGCGGCGGCTGCCCTCCATCGTCTGGCGG > 4:162076/1‑149 CTGTTCGAGTACATCGATTGACTCAGTGATTGCCTGGACAGGCCAAACAAAAAAGGCGATCCATCCGGATCGCCTTTTTTTGTTACTTGACCACTTTCAGGCTTGGCCGGCCAGTCGGACGCGGCGGCTGCCCTCCATCGTCTGGCGGG < 6:42426/149‑1 GGCCGGCCAGTCGGACGCGGCGGCTGACCTCCATCTTCTGGCGGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGTATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAA > 8:71582/1‑148 CAGTCGGACGCGGCGGCTGCCCTCCATCGTCTGGCGGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGT > 5:198870/1‑124 CAGTCGGACGCGGCGGCTGCCCTCCATCGTCTGGCGGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGT < 6:198870/124‑1 GGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGG < 2:346414/149‑1 GGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCG < 5:252893/131‑1 GGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCG > 6:252893/1‑131 GCTGTTCGAGTACATCGATTGACTCAGTGATTGCCTGGACAGGCCAAACAAAAAAGGCGATCCATCCGGATCGCCTTTTTTTGTTACTTGACCACTTTCAGGCTTGGCCGGCCAGTCGGACGCGGCGGCTGCCCTCCATCGTCTGGCGGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1508144‑1507992 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGG > NC_002947/1508041‑1508184 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |