New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1507992 =	58 (1.070)	3 (0.060)	3/250	NT	5.7%	coding (393/462 nt)	sspB	ClpXP protease specificity‑enhancing factor
	?	NC_002947	1508041 =	43 (0.830)					coding (442/462 nt)	sspB	ClpXP protease specificity‑enhancing factor

TACGCCCGCGAAAATGGCCAGGGTATGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGG  >  NC_002947/1507894‑1508184                                                                                                                                                     |                                                                                                                                                tACGCCCGCGAAAATGGCCAGGGTATGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGACGATGTGCAGCCGGATGACGATGGCCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAg                                                                                                                                                >  4:196267/1‑149 (MQ=255)   cGCCCGCGAAAATGGCCAGGGTATGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCaa                                                                                                                                                 <  1:63402/146‑1 (MQ=255)      ccGCGAAAATGGCCAGGGTATGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGa                                                                                                                                           <  5:152047/149‑1 (MQ=255)       cgcgAAAATGGCCAGGGTATGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCGAAGCCTGa                                                                                                                                           >  8:271939/1‑148 (MQ=255)        gcgAAAATGGCCAGGGTATGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGaaa                                                                                                                                         <  3:102702/149‑1 (MQ=255)        gcgAAAATGGCCAGGGTATGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGa                                                                                                                                           >  7:35042/1‑147 (MQ=255)             aaTGGCCAGGGTATGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATCGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTgg                                                                                                                                     <  1:250044/149‑1 (MQ=255)               tGGCCAGGGTATGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCa                                                                                                                                  <  6:48434/149‑1 (MQ=255)                 gCCAGGGTATGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCaa                                                                                                                                 <  1:305678/148‑1 (MQ=255)                 gCCAGGGTATGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAg                                                                                                                                >  6:191204/1‑149 (MQ=255)                   cAGGGTATGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGt                                                                                                                               >  3:142572/1‑148 (MQ=255)                    aGGGTATGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTa                                                                                                                              >  3:180443/1‑148 (MQ=255)                            gTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACaaaaa                                                                                                                       >  3:141999/1‑147 (MQ=255)                            gTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACaaaaa                                                                                                                       >  7:160227/1‑147 (MQ=255)                             tCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAg                                                                                                                    <  4:142572/149‑1 (MQ=255)                               ttCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGc                                                                                                                  >  6:93562/1‑149 (MQ=255)                                        gAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCggat                                                                                                         <  3:210792/149‑1 (MQ=255)                                         aGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCggatg                                                                                                        >  6:110231/1‑149 (MQ=255)                                                  cGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCt                                                                                                <  5:93562/148‑1 (MQ=255)                                                    atggatggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCtttt                                                                                             <  5:110231/149‑1 (MQ=255)                                                     tggatggCGACGAGCTGGAAGACGACGATGTGCAGCCGGATGACGATGGCCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCATCCGGATCGCCttttt                                                                                            <  3:196267/149‑1 (MQ=255)                                                            cgacgaGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTgg                                                                                     <  8:160227/149‑1 (MQ=255)                                                             gacgaGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGc                                                                                    <  7:271939/149‑1 (MQ=255)                                                             gacgaGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGc                                                                                    >  6:144499/1‑149 (MQ=255)                                                             gacgaGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGc                                                                                    <  7:323172/149‑1 (MQ=255)                                                               cgaGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCt                                                                                  <  8:35042/149‑1 (MQ=255)                                                                    tGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTc                                                                               >  3:162076/1‑147 (MQ=255)                                                                      gAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCa                                                                             <  5:191204/147‑1 (MQ=255)                                                                      gAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAg                                                                            <  4:141999/148‑1 (MQ=255)                                                                      gAAGACGATGATGTCCAGCCGGATGACGATGGCCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAg                                                                            <  8:110968/148‑1 (MQ=255)                                                                              tgatgTGCAGCCGGATGACGATGGCCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACt                                                                   >  4:34974/1‑149 (MQ=255)                                                                                   tgCAGCCGGATGACGATGGCCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTgg                                                                                     <  4:267351/126‑1 (MQ=255)                                                                                   tgCAGCCGGATGACGATGGCCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTgg                                                                                     >  3:267351/1‑126 (MQ=255)                                                                                          ggATGACGATGGCCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGAt                                                       <  4:180443/149‑1 (MQ=255)                                                                                           gATGACGATGGCCCGCCAGACGAT‑GCAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTCAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATg                                                      >  4:160851/1‑149 (MQ=255)                                                                                              gACGATGGCCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAgg                                                                           <  4:37924/125‑1 (MQ=255)                                                                                              gACGATGGCCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAgg                                                                           >  3:37924/1‑125 (MQ=255)                                                                                                     ggccggccagtcggacgcggcggctgacctccatcttctggcgggccaAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGTATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGaa                                              >  8:71582‑M2/49‑148 (MQ=255)                                                                                                      CCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAg                                           <  6:42426‑M1/149‑1 (MQ=255)                                                                                                       CCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGc                                          >  4:162076‑M1/1‑149 (MQ=255)                                                                                                        cGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCt                                         >  2:108076/1‑149 (MQ=255)                                                                                                            cagtcggacgcggcggctgccctccatcgtctggcgggccaAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGt                                                               <  6:198870‑M2/83‑1 (MQ=255)                                                                                                            cagtcggacgcggcggctgccctccatcgtctggcgggccaAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGt                                                               >  5:198870‑M2/42‑124 (MQ=255)                                                                                                             gACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGAc                                     >  4:306965/1‑148 (MQ=255)                                                                                                                gAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGAtc                                 >  2:19694/1‑149 (MQ=255)                                                                                                                        ggCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGc                                          <  4:214577/133‑1 (MQ=255)                                                                                                                        ggCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGc                                          >  3:214577/1‑133 (MQ=255)                                                                                                                          cAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACg                        >  1:346414/1‑149 (MQ=255)                                                                                                                                  gcgTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAac                <  3:160851/149‑1 (MQ=255)                                                                                                                                         aCTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGc         <  3:34974/149‑1 (MQ=255)                                                                                                                                                ggccaAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCg                    >  6:252893‑M2/6‑131 (MQ=255)                                                                                                                                                ggccaAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCg                    <  5:252893‑M2/126‑1 (MQ=255)                                                                                                                                                ggccaAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACgg  <  2:346414‑M2/144‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                TACGCCCGCGAAAATGGCCAGGGTATGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGAT‑GGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGG  >  NC_002947/1507894‑1508184

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.