| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1616576 | 72 (1.330) | 6 (0.110) | 6/252 | NT | 8.1% | coding (683/1515 nt) | PP_1416 | tricarboxylate transport protein TctA |
| ? | NC_002947 | = 1616617 | 66 (1.260) | coding (642/1515 nt) | PP_1416 | tricarboxylate transport protein TctA | |||||
CGCTGGCCAGCGTTGCGCCGGCGCCGGGTAGAACACCCATGATGAAACCAAGCAGGCCGCAACGGATGTTGACCAGGAACACCGAGGCCGCTTCCTTGAAGTTGAACAGCATACGGCCGGTAGCCTTGACCGCCTGGTGGCCATGGTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1616427‑1616576‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggCCTGTTCTCCATCAGCGAAATCCTCCTGCTGCTGGAAAAGACCCACCATGGCCACCAGGCGGTCAAGGCTACCGGCCGTATGCTGTTCAACTTCAAGGAAGCGGCCTCGGTGTTCCTGGTCAACATCCGTTGCGGCCTGCTTGGTTTC < NC_002947/1616617‑1616470 CGCTGGCCAGCGTTGCGCCGGCGCCGGGTAGAACACCCATGATGAAACCAAGCAGGCCGCAACGGATGTTGACCAGGAACACCGAGGCCGCTTCCTTGAAGTTGAACAGCATACGGCCGGTAGCCTTGACCGCCTGGTGGCCATGGTGG < 1:151746/149‑1 GCTGGCCAGCGTTGCGCCGGCGCCGGGTAGAACACCCATGATGAAACCAAGCAGGCCGCAACGGATGTTGACCAGGAACACCGAGGCCGCTTCCTTGAAGTTGAACAGCATACGGCCGGTAGCCTTGACCGCCTGGTGGCCATGGTGGG < 6:321933/149‑1 ACCCATGATGAAACCAAGCAGGCCGCAACGGATGTTGACCAGGAACACCGAGGCCGCTTCCTTGAAGTTGAACAGCATACGGCCGGTAGCCTTGACCGCCTGGTGGCCATGGTGGGCCTGTTCTCCATCAGCGAAATCCTCCTGCTGCT > 8:164491/1‑149 CAAGCAGGCCGCAACGGATGTTGACCAGGAACACCGAGGCCGCTTCCTTGAAGTTGAACAGCATACGGCCGGTAGCCTTGACCGCCTGGTGGCCATGGTGGGCCTGTTCTCCATCAGCGAAATCCTCCTGCTGCTGGAAAAGACCCAC > 2:54647/1‑148 AAGCAGGCCGCAACGGATGTTGACCAGGAACACCGAGGCCGCTTCCTTGAAGTTGAACAGCATACGGCCGGTAGCCTTGACCGCCTGGTGGCCATGGTGGGCCTGTTCTCCATCAGCGAAATCCTCCTGCTGCTGGAAAAGACCCACCA < 1:54647/149‑1 CAGGCCGCAACGGATGTTGACCAGGAACACCGAGGCCGCTTCCTTGAAGTTGAACAGCATACGGCCGGTAGCCTTGACCGCCTGGTGGCCATGGTGGGCCTGTTCTCCATCAGCGAAATCCTCCTGCTGCTGGAAAAGACCCACCATGG < 7:164491/149‑1 GTTGAACAGCATACGGCCGGTAGCCTTGACCGCCTGGTGGCCATGGTGGGTCT‑TT‑TCCATCAGCGAAATCCTCCTGCTGCTGG < 7:231452/83‑1 GTTGAACAGCATACGGCCGGTAGCCTTGACCGCCTGGTGGCCATGGTGGGTCT‑TT‑TCCATCAGCGAAATCCTCCTGCTGCTGG > 8:231452/1‑83 GCCTGTTCTCCATCAGCGAAATCCTCCTGCTGCTGGAAAAGACCCACCATGGCCACCAGGCGGTCAAGGCTACCGGCCGTATGCTGTTCAACTTCAAGGAAGCGGCCTCGGTGTTCCTGGTCAACATCCGTTGCGGCCTGCTTGGTTTC < 1:332484/149‑1 GCCTGTTCTCCATCAGCGAAATCCTCCTGCTGCTGGAAAAGACCCACCATGGCCACCAGGCGGTCAAGGCTACCGGCCGTATGCTGTTCAACTTCAAGGAAGCGGCCTCGGTGTTCCTGGTCAACATCCGTTGCGGCCTGCTTGGTTTC < 2:20920/149‑1 GCCGGTTCTCCATCAGCGAAATCCTCCTGCTGCTGGAAAAGACCCACCATGGCCACCAGGCGGTCAAGGCTACCGGCCGTATGCTGTTCAACTTCAAGGAAGCGGCCTCGGTGTTCCTTGTCAACATCCGTTGCGGCCTTCTTGGTTTC < 8:287816/149‑1 CGCTGGCCAGCGTTGCGCCGGCGCCGGGTAGAACACCCATGATGAAACCAAGCAGGCCGCAACGGATGTTGACCAGGAACACCGAGGCCGCTTCCTTGAAGTTGAACAGCATACGGCCGGTAGCCTTGACCGCCTGGTGGCCATGGTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1616427‑1616576‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggCCTGTTCTCCATCAGCGAAATCCTCCTGCTGCTGGAAAAGACCCACCATGGCCACCAGGCGGTCAAGGCTACCGGCCGTATGCTGTTCAACTTCAAGGAAGCGGCCTCGGTGTTCCTGGTCAACATCCGTTGCGGCCTGCTTGGTTTC < NC_002947/1616617‑1616470 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |