New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1617758 =	54 (1.000)	3 (0.070)	3/222	NT	7.7%	intergenic (‑13/+160)	PP_1417/PP_1418	tricarboxylate transport protein TctB/tricarboxylate transport protein TctC
	?	NC_002947	1617897 =	26 (0.560)					intergenic (‑152/+21)	PP_1417/PP_1418	tricarboxylate transport protein TctB/tricarboxylate transport protein TctC

TAAGCCTGTCGGACTCACCACCACTCCTGTGGGAGCGGCCTTGTGTCGGGATCGGGCGCGAAGCGGCCCCTGGCACAGCCGATACGATGCTTCGTACAGATCGCATCGGCAGGTTTAGCGGCAGCTTCGCGCCCGATCGCGACGCAAGGCCGCTCCCACAGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1617920‑1617758 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaggccgctcccacaggaGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAGCGCCTTGTAGTCAGCCACTTGCTTCTTCACATAGCCGTCCAGCTCTTCGCCGGTCATGGCGAACGGGAACAGCTCGCGCTGGTCTCGCAGCTTGGC  >  NC_002947/1617897‑1618043                                                                                                                                                                                                                                                                                                                        ttAGCCTGTCGTACTAACCACCACTCCTGTGGTAGCGGCGTTGTGTCGGGATCGGGCGCGAAGCGGCCCCTGGCACAGCCGATACGATGCTTCTTACAGATCGCATCGGCAGGTTTAGCGGCAGCTTCGCGCCCGATCGCGACGCAAG                                                                                                                                                                    <  4:206448/146‑1   AGCCTGTCGGACTCACCACCACTCCTGTGGGAGCGGCCTTGTGTCGGGATCGGGCGCGAAGCGGCCCCTGGCACAGCCGATACGATGCTTCGTACAGATCGCATAGGCAGGTTTAGCGGCAGCTTAGCGCCCGATCGCGAAGCAAGGCC                                                                                                                                                                 >  4:269883/1‑149        GTCGGACTCACCACCACTCCTGTGGGAGCGGCCTTGTGTCGGGATCGGGCGCGAAGCGGCCCCTGGCACAGCCGATACGATGCTTCGTACAGATCGCATCGGGAGGTTTAGCGGCAGCATCGCGCCCGATCGCGACGCAAGGCCGCTCC                                                                                                                                                            >  5:324652/1‑149            GACTCACCACCACTCCTGTGGGAGCGGCCTTGTGTCGGGATCGGGCGCGAAGCGGCCCCTGGCACAGCCGATACGATGCTTCGTACAGATCGCATCGGCAGGTTTAGCGGCAGCTTCGCGCCCGATCGCGACGCAAGG                                                                                                                                                                   <  3:214015/138‑1            GACTCACCACCACTCCTGTGGGAGCGGCCTTGTGTCGGGATCGGGCGCGAAGCGGCCCCTGGCACAGCCGATACGATGCTTCGTACAGATCGCATCGGCAGGTTTAGCGGCAGCTTCGCGCCCGATCGCGACGCAAGG                                                                                                                                                                   >  4:214015/1‑138               TCACCACCACTCCTGTGGGAGCGGCCTTGTGTCGGGATCGGGCGCGAAGCGGCCCCTGGCACAGCCGATACGATGCTTAGTACAGATCGCATAGGCAGGTTTAGCGGCAGCTTCGCGCCCGATCGCGCCGCAAGGCCGCTCCCACAGGA                                                                                                                                                     >  5:349769/1‑149                                                      GGGCGCGAAGCGGCCCCTGGCACAGCCGATACGATGCTTCGTACAGATCGCATCGGCAGGTTTAGCGGCAGCTTCGCGCCCGATCGCGACGCAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAA                                                                                                              >  4:69471/1‑149                                                        GCGCGAAGCGGCCCCTGGCACAGCCGATACGATGCTTCGTACAGATCGCATCGGCAGGTTTAGCGGCAGCTTCGCGCCCGATCGCGACGCAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATT                                                                                                            >  4:84839/1‑149                                                             AAGCGGCCCCTGGCACAGCCGATACGATGCTTCGTACAGATCGCATCGGCAGGTTTAGCGGCAGCTTCGCGCCCGATCGCGACGCAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTG                                                                                                       <  3:69471/149‑1                                                                                                                                                     GCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAGCGCCTTGTAGTCAGCCACTTGCTTCTTCACATAGCCGTCCAGCTCTTCGCCGGTCATGGCGAACG                                 <  7:273017/131‑1                                                                                                                                                     GCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAGCGCCTTGTAGTCAGCCACTTGCTTCTTCACATAGCCGTCCAGCTCTTCGCCGGTCATGGCGAACG                                 >  8:273017/1‑131                                                                                                                                                     GCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAAATCCTTGGCCAGCGCCTTGTAGTCCGCCACTTGCTTATTAACATAGACGTCCAGCTCTTCGCCGGTCATGGCGAACGCGAACAGCTCGCGCGGGT               >  4:251740/1‑149                                                                                                                                                        GCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAGCGCCTTGTAGTCAGCCACTTGCTTCTTCACATAGCCGTCCAGCTCTTCGCCGGTCATGGCGAACGGGAACAGCTCGCGCTGGTCTC            >  4:159450/1‑149                                                                                                                                                            CCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAGCGCCTTGTAGTCAGCCACTTGCTTCTTCACATAGCCGTCCAGCTCTTCGCCGGTCATGGCGAACGGGAACAGCTCGCGCTGGTCTCGCA         <  3:159450/148‑1                                                                                                                                                             CACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAGCGCCTTGTAGTCAGCCACTTGCTTCTTCACATAGCCGTCCAGCTCTTCGCCGGTCATGGCGAACGGGAACAGCTCGCGCTGGTCTCGCAGC       <  3:84839/149‑1                                                                                                                                                                  GAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAGCGCCTTGTAGTCAGCCACTTGCTTCTTCACATAGCCGTCCAGCTCTTCGCCGGTCATGGCGAACGGGAACAGCTCGCGCTGGTCTCGCAGCTTGGC  >  1:170163/1‑149                                                                                                                                                                                                                                                                                                                        TAAGCCTGTCGGACTCACCACCACTCCTGTGGGAGCGGCCTTGTGTCGGGATCGGGCGCGAAGCGGCCCCTGGCACAGCCGATACGATGCTTCGTACAGATCGCATCGGCAGGTTTAGCGGCAGCTTCGCGCCCGATCGCGACGCAAGGCCGCTCCCACAGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1617920‑1617758 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaggccgctcccacaggaGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAGCGCCTTGTAGTCAGCCACTTGCTTCTTCACATAGCCGTCCAGCTCTTCGCCGGTCATGGCGAACGGGAACAGCTCGCGCTGGTCTCGCAGCTTGGC  >  NC_002947/1617897‑1618043

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.