| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1759848 = | 79 (1.460) | 5 (0.100) | 5/246 | NT | 7.2% | coding (1011/1296 nt) | PP_1565 | HK97 family portal protein |
| ? | NC_002947 | 1759910 = | 54 (1.060) | coding (1073/1296 nt) | PP_1565 | HK97 family portal protein | |||||
CGTTGCCTCCCTCCGGGGGCATGTTCTCTTTCAGCCGGCACTCGTCCCGGGTGTAGATACCGTTCTGGGTCATGGAGCTGTAGAAGGCCGCACGCGCCGCGCTATCCATGCGCAGCAACCCTTCCGGGTTGAACTTCACGTAGAAGCGGCGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1760002‑1759848‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcgcGTGCGGCCTTCTACAGCTCCATGACCCAGAACGGTATCT‑‑ACACCCGGGACGAGTGCCGGCTGAAAGAGAACATGCCCCCGGAGGGAGGCAACGCGGCGAAGCTCACCGTGCAATCCAACATGCTGCCGATCGACAAGCTGGGCGAA > NC_002947/1759910‑1760055 CGTTGCCTCCCTCCGGGGGCATGTTCTCTTTCAGCCGGCACTCGTCCCGGGTGTAGATACCGTTCTGGGTCATGGAGCTGTAGAAGGCCGCACGCGCCGCGCTATCCATGCGCAGCAACCCTTCCGGGTTGAACTTCACGTAGAAGCGG < 8:59847/149‑1 TTGCCTCCCTCCGGGGGCATGTTCTCTTTCAGCCGGCACTCGTCCCGGGTGTAGATACCGTTCTGGGTCATGGAGCTGTAGAAGGCCGCACGCGCCGCGCTATCCATGCGCAGCAACCCTTCCGGGTTGAACTTCACGTAGAAGCGGCG > 5:138342/1‑149 TCCCTCCGGGGGCATGTTCTCTTTCAGCCGGCACTCGTCCCGGGTGTAGATACCGTTCTGGGTCATGGAGCTGTAGAAGGCCGCACGCGCCGCGCTATCCATGCGCAGCAACCCTTCCGGGTTGAACTTCACGTAGAAGCGGCGGCGC > 2:318687/1‑148 TGTAGAAGGCCGCACGCGCCGCGCTATCCATGCGCAGCAACCCTTCCGGGTTGAACTTCACGTAGAAGCG‑‑‑‑‑‑‑‑‑GCGGCCTTCTACAGCTCCATGACCCAGAACGGTATCT‑‑ACACCCGGGACGAGTGCCGGCTGAAAGAGAACATGCCCCCG > 2:98606/1‑148 GCACGCGCCGCGCTATCCATGCGCAGCAACCCTTCCGGGTTGAACTTCACGTAGAAGCGGCGGCGCGTGCGGCCTTCTACAGCTCCATGACCCAGAACGGTATCT‑‑ACACCCGGGACGAGTGCCGGCTGAAAGAGAACATGCCCCCGGAG > 4:317287/1‑149 GCCGCGCTATCCATGCGCAGCAACCCTTCCGGGTTGAACTTCACGTAGAAGCGGCGGCGCGTGCGGCCTTCTACAGCTCCATGACCCAGAACGGTATCT‑‑ACACCCGGGACGAGTGCCGGCTGAAAGAGAACATG‑CCCCGGAGG > 7:317559/1‑143 GCCGCGCTATCCATGCGCAGCAACCCTTCCGGGTTGAACTTCACGTAGAAGCGGCGGCGCGTGCGGCCTTCTACAGCTCCATGACCCAGAACGGTATCT‑‑ACACCCGGGACGAGTGCCGGCTGAAAGAGAACATG‑CCCCGGAGG < 8:317559/143‑1 CGCTATCCATGCGCAGCAACCCTTCCGGGTTGAACTTCACGTAGAAGCG‑‑‑‑‑‑‑‑‑GCGGCCTTCTACAGCTCCATGACCCAGAACGGTATCTTAACACCCGGGACGAGTGCCGGCTGAAAGAGAACATGCCCCCGGAGGGAGGCAACGCGGCGAA < 1:98606/149‑1 CGCGTGCGGCCTTCTACAGCTCCATGACCCAGAACGGTATCT‑‑ACACCCGGGACGAGTGCCGGCTGAAAGAGAACATGCCCCCGGAGGGAGGCAACGCGGCGAAGCTCACCGTGCAATCCAACATGCTGCCGATCGACAAGCTGGGCGAA < 5:62821/149‑1 CGTTGCCTCCCTCCGGGGGCATGTTCTCTTTCAGCCGGCACTCGTCCCGGGTGTAGATACCGTTCTGGGTCATGGAGCTGTAGAAGGCCGCACGCGCCGCGCTATCCATGCGCAGCAACCCTTCCGGGTTGAACTTCACGTAGAAGCGGCGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1760002‑1759848‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcgcGTGCGGCCTTCTACAGCTCCATGACCCAGAACGGTATCT‑‑ACACCCGGGACGAGTGCCGGCTGAAAGAGAACATGCCCCCGGAGGGAGGCAACGCGGCGAAGCTCACCGTGCAATCCAACATGCTGCCGATCGACAAGCTGGGCGAA > NC_002947/1759910‑1760055 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |