New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1759848 =79 (1.460)5 (0.100) 5/246 NT 7.2% coding (1011/1296 nt) PP_1565 HK97 family portal protein
?NC_002947 1759910 = 54 (1.060)coding (1073/1296 nt) PP_1565 HK97 family portal protein

GCCGTGGATGGTCGGGCATACGCAAAACTCCACCAGCTGGGGCACTGGCATGGAGCAGCAGATGATCGGCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACAGCTCCATGACCCAGAACGGTATCTACACCCGGGACGAGTGCCGGCTGAAAGAGAACATGCCCCCGGAGGGA  >  NC_002947/1759701‑1759995
                                                                                                                                                    |                                                                                                                                                    
gccgTGGATGGTCGGGCATACGCAAAACTCCACCAGCTGGGGCACTGGCATGGAGCAGCAGATGATCGGCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAgc                                                                                                                                                     >  2:95467/1‑149 (MQ=255)
  ttcgcccagcttgtcgatcggcagcatgttggattgcacggtgagcttcgccgcgttgcctccctccgggggcatgttctctttcagccggcactcgtcccgggtgtagataccgttctgggtcatggagctgtagaaggccgcacgcg                                                                                                                                                    <  5:62821‑M1/3‑1 (MQ=255)
    tGGATGGGCGGGCATACGCAACACTCCACCAGCTGGGGCACTGGCATGGAGCAGCAGATGATCGGCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGcgccg                                                                                                                                                 <  4:229473/149‑1 (MQ=255)
      gATGGTCGGGCATACGCAAAACTCCACCAGCTGGGGCACTGGCATGGAGCAGCAGATGATCGGCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGcgccgcc                                                                                                                                               <  1:344280/149‑1 (MQ=255)
              ggCATACGCAAAACTCCACCAGCTGGGGCACTGGCATGGAGCAGCAGATGATCGGCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTAc                                                                                                                                       <  2:229045/149‑1 (MQ=255)
                cATACGCAAAACTCCACCAGCTGGGGCACTGGCATGGAGCAGCAGATGATCGGCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGt                                                                                                                                     >  2:155011/1‑149 (MQ=255)
                 aTACGCAAAACTCCACCAGCTGGGGCACTGGCATGGAGCAGCAGATGATCGGCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGt                                                                                                                                     >  1:13335/1‑148 (MQ=255)
                 aTACGCAAAACTCCACCAGCTGGGGCACTGGCATGGAGCAGCAGATGATCGGCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTg                                                                                                                                    <  3:153317/149‑1 (MQ=255)
                   aCGCAAAACTCCACCAGCTGGGGCACTGGCATGGAGCAGCAGATGATCGGCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTg                                                                                                                                    >  8:198223/1‑147 (MQ=255)
                   aCGAAAAACTCCACCAGCTGGGGAAATGGAATGTACCTGAATATTATCGGATTCCTTTCGTTACCCATCCTTCCCTGTACCATGCGCATTTAATTGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGaa                                                                                                                                  <  1:95467/149‑1 (MQ=255)
                    cGCAAAACTCCACCAGCTGGGGCACTGGCATGGAGCAGCAGATGATCGGCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGaa                                                                                                                                  <  5:195038/148‑1 (MQ=255)
                    cGCAAAACTCCACCAGCTGGGGCACTGGCATGGAGCAGCAGATGATCGGCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAg                                                                                                                                 >  2:126522/1‑149 (MQ=255)
                     gCAAAACTCCACCAGCTGGGGCACTGGCATGGAGCAGCAGATGATCGGCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGt                                                                                                                                >  6:95657/1‑149 (MQ=255)
                     gCAAAACTCCACCAGCTGGGGCACTGGCATGGAGCAGCAGATGATCGGCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGt                                                                                                                                >  6:150038/1‑149 (MQ=255)
                     gCAAAACTCCACCAGCTGGGGCACTGGCATAGAGCAGCAGATGATCGGCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGt                                                                                                                                >  2:160519/1‑149 (MQ=255)
                      cAAAACTCCACCAGCTGGGGCACTGGCATGGAGCAGCAGATGATCGGCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGt                                                                                                                                >  5:204485/1‑148 (MQ=255)
                       aaaaCTCCACCAGCTGGGGCACTGGCATGGAGCAGCAGATGATCGGCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCtt                                                                                                                                           <  7:149288/136‑1 (MQ=255)
                       aaaaCTCCACCAGCTGGGGCACTGGCATGGAGCAGCAGATGATCGGCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCtt                                                                                                                                           >  8:149288/1‑136 (MQ=255)
                            tCCACCAGCTGGGGCACTGGCATGGAGCAGCAGATGATCGGCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAAccc                                                                                                                         >  1:34117/1‑149 (MQ=255)
                              caccaGCTGGGGCACTGGCATGGAGCAGCAGATGATCGGCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCg                                                                                                                        >  4:105576/1‑148 (MQ=255)
                               accaGCTGGGGCACTGGCATGGAGCAGCAGATGATCGGCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCgg                                                                                                                       >  5:107853/1‑148 (MQ=255)
                                        ggCACTGGCATGGAGCAGCAGATGATCGGCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTtgct                                                                                                             <  1:126522/149‑1 (MQ=255)
                                          cACTGGCATGGAGCAGCAGATGATCGGCTTCCTGTCGTTCACCCTGCTTCCCTGTATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCTGAAGGGTtgctgc                                                                                                           <  3:114765/149‑1 (MQ=255)
                                              ggCATGGAGCAGCAGATGATCGGCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCAt                                                                                                       >  6:302837/1‑149 (MQ=255)
                                               gCATGGAGCAGCAGATGATCGGCTTCGCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCAt                                                                                                       >  1:3047/1‑149 (MQ=255)
                                               gCATGGAGCAGCAGATGATCGGCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCa                                                                                                        <  3:105576/147‑1 (MQ=255)
                                               gCATGGAGCAGCAGATGATCGGCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCa                                                                                                        <  7:162763/147‑1 (MQ=255)
                                               gCATGGAGCAGCAGATGATCGGCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATg                                                                                                      >  8:8881/1‑149 (MQ=255)
                                               gCATGGAGCAGCAGATGAGCGGCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCAt                                                                                                       <  6:204485/148‑1 (MQ=255)
                                                ttcgccgcgttgcctccctccgggggcatgttctctttcagccggcactcgtcccgggtgttaagataccgttctgggtcatggagctgtagaaggccgc‑‑‑‑‑‑‑CGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAgcg                                                                                               <  1:98606‑M1/49‑1 (MQ=255)
                                                 aTGGAGCAGCAGATGATCGGCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTg                                                                                                                                    >  7:93727/1‑117 (MQ=255)
                                                 aTGGAGCAGCAGATGATCGGCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTg                                                                                                                                    <  8:93727/117‑1 (MQ=255)
                                                 aTGGAGCAGCAGATGATCGGCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGa                                                                                                    >  1:318687/1‑149 (MQ=255)
                                                    gAGCAGCAGATGATCGGCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATa                                                                                                  <  6:107853/148‑1 (MQ=255)
                                                    gAGCAGCAGATGATCGGCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATa                                                                                                  <  5:302837/148‑1 (MQ=255)
                                                     agcagcAGATGATCGGCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAgc                                                                                                >  3:113939/1‑149 (MQ=255)
                                                        agcagATGATCGGCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAgcgcg                                                                                             >  4:254488/1‑149 (MQ=255)
                                                              tgatCGGCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGt                                                                                       <  2:233339/149‑1 (MQ=255)
                                                                atCGGCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTg                                                                                      <  7:183386/148‑1 (MQ=255)
                                                                 tCGGCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCg                                                                                    >  2:41656/1‑149 (MQ=255)
                                                                 ctccgggggcatgttctctttcagccggcactcgtcccgggtgtagataccgttctgggtcatggagctgtagaaggccgcacGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGc                                                                                     >  4:317287‑M1/84‑149 (MQ=255)
                                                                 cctccggggcatgttctctttcagccggcactcgtcccgggtgtagataccgttctgggtcatggagctgtagaaggccgcacGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAgcgcggc                                                                                           >  7:317559‑M1/84‑143 (MQ=255)
                                                                 cctccggggcatgttctctttcagccggcactcgtcccgggtgtagataccgttctgggtcatggagctgtagaaggccgcacGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAgcgcggc                                                                                           <  8:317559‑M1/60‑1 (MQ=255)
                                                                    gCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGACGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATCGATAGCGCGGCGCGTGCGGcc                                                                                 >  7:295513/1‑149 (MQ=255)
                                                                      cgggggcatgttctctttcagccggcactcgtcccgggtgtagataccgttctgggtcatggagctgtagaaggccgc‑‑‑‑‑‑‑CGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACa                                                                          >  2:98606‑M1/79‑148 (MQ=255)
                                                                        ccTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTc                                                                              >  6:104752/1‑148 (MQ=255)
                                                                            gTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTa                                                                            >  8:42194/1‑147 (MQ=255)
                                                                             tCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTAc                                                                           <  3:254488/147‑1 (MQ=255)
                                                                             tCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACa                                                                          <  1:160519/148‑1 (MQ=255)
                                                                             tCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACa                                                                          <  2:34117/148‑1 (MQ=255)
                                                                               gTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTCCGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACAGCt                                                                       >  6:62821/1‑149 (MQ=255)
                                                                               gTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACAGCt                                                                       <  5:95657/149‑1 (MQ=255)
                                                                                   aCCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACAGCTCCAt                                                                   <  2:3047/149‑1 (MQ=255)
                                                                                   aCCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACAGCTCCAt                                                                   >  6:138342/1‑149 (MQ=255)
                                                                                     ccTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAgg                                                                                                                   <  1:181714/99‑1 (MQ=255)
                                                                                     ccTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAgg                                                                                                                   >  5:262022/1‑99 (MQ=255)
                                                                                     ccTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAgg                                                                                                                   >  2:181714/1‑99 (MQ=255)
                                                                                     ccTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAgg                                                                                                                   <  6:262022/99‑1 (MQ=255)
                                                                                     ccTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACAGCt                                                                       <  1:26632/143‑1 (MQ=255)
                                                                                     ccTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACAGCt                                                                       >  2:26632/1‑143 (MQ=255)
                                                                                     ccTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACAGCTCCATGa                                                                 >  7:119178/1‑149 (MQ=255)
                                                                                          ttCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACAGCTCCATGAcc                                                               >  7:228595/1‑146 (MQ=255)
                                                                                             ccTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACAGCTCCATGACCCAGAAc                                                         >  4:105496/1‑149 (MQ=255)
                                                                                              cTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACAGCTCCATGACCCAGAACg                                                        >  2:42211/1‑149 (MQ=255)
                                                                                              cTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACAGCTCCATGACCCAGAACg                                                        >  6:135860/1‑149 (MQ=255)
                                                                                                 gATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACAGCTCCATGACCCAGAACGGt                                                      <  5:135860/148‑1 (MQ=255)
                                                                                                 gATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACAGCTCCATGACCCAGAACGGt                                                      <  4:113939/148‑1 (MQ=255)
                                                                                                   tCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACAGCTCCATGACCCAGAACGGTATc                                                   <  3:105496/149‑1 (MQ=255)
                                                                                                   tCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACAGCTCCATGACCCAGAACGGTATc                                                   <  1:155011/149‑1 (MQ=255)
                                                                                                   tCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACAGCTCCATGACCCAGAACGGTATc                                                   <  2:13335/149‑1 (MQ=255)
                                                                                                     aaGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACAGCTCCATGACCCAGAACGGTATCTa                                                 <  8:119178/149‑1 (MQ=255)
                                                                                                     aaGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACAGCTCCATGACCCAGAACGGTATCTa                                                 >  1:262029/1‑149 (MQ=255)
                                                                                                        cgcATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACAGCTCCATGACCCAGAACGGTATCTacac                                              <  5:104752/149‑1 (MQ=255)
                                                                                                            ttGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACAGCTCCATGACCCAGAACGGTATCTACACCCgg                                         <  5:150038/149‑1 (MQ=255)
                                                                                                               aaaTGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACAGCTCCATGACCCAGAACGGTATCTACACCCGGGAc                                      <  7:198223/149‑1 (MQ=255)
                                                                                                                 aTGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACAGCTCCATGACCCAGAACGGTATCTACACCCGGGACGa                                    <  7:8881/149‑1 (MQ=255)
                                                                                                                    tgCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACAGCTCCATGACCCAGAACGGTATCTACACCCGGGACGAGt                                  <  1:42211/148‑1 (MQ=255)
                                                                                                                    tgCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACAGCTCCATGACCCAGAACGGTATCTACACCCGGGACGAGTg                                 >  1:210909/1‑149 (MQ=255)
                                                                                                                     gcgcCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACAGCTCCATGACCCAGAACGGTATCTACACCCGGGACGAGTg                                 <  7:42194/148‑1 (MQ=255)
                                                                                                                       gcCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACAGCTCCATGACCCAGAACGGTATCTACACCCGGGACGAGTGCCg                              >  8:62821/1‑149 (MQ=255)
                                                                                                                         cAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATAGATAGCGCGGCGCGTGCGGCCTTCTACAGCTCCATGACCCAGAACGGTATCTACACCCGGGACGAGTGCCGGc                            >  5:9363/1‑149 (MQ=255)
                                                                                                                           aCCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACAGCTCCATGACCCAGAACGGTATCTACACCCGGGACGAGTGCCGGCTg                          <  7:62821/149‑1 (MQ=255)
                                                                                                                              ggCGCCTTCTGAGACCAGATGATCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACAGCTCCATGACCCAGAACGGTATCTACACCCGGGACGAGTGCCGGCTGaaa                       <  8:295513/149‑1 (MQ=255)
                                                                                                                                        gcGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACAGCTCCATGACCCAGAACGGTATCTACACCCGGGACGAGTGCCGGCTGaa                        <  7:30293/138‑1 (MQ=255)
                                                                                                                                        gcGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACAGCTCCATGACCCAGAACGGTATCTACACCCGGGACGAGTGCCGGCTGaa                        >  8:30293/1‑138 (MQ=255)
                                                                                                                                           aCCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACAGCTCCATGACCCAGAACGGTATCTACACCCAGGGACGAGTGCCGGCTGAAAGAGAACATGccc           <  1:41656/149‑1 (MQ=255)
                                                                                                                                                aTGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACAGCTCCATGACCCAGAACGGTATCTACACCCGGGACGAGTGCCGGCTGAAAGAGAACATGCCCCCggag     <  2:210909/149‑1 (MQ=255)
                                                                                                                                                    GCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACAGCTCCATGACCCAGAACGGTATCTACACCCGGGACGAGTGCCGGCTGAAAGAGAACATGCCCCCggaggga  >  2:318687‑M1/1‑148 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
GCCGTGGATGGTCGGGCATACGCAAAACTCCACCAGCTGGGGCACTGGCATGGAGCAGCAGATGATCGGCTTCCTGTCGTTCACCCTGCTTCCCTGGATCAAGCGCATTGAAATGTGCGCCAACCGGCGCCTGCTGCGACCAGATGAGCGCCGCCGCTTCTACGTGAAGTTCAACCCGGAAGGGTTGCTGCGCATGGATAGCGCGGCGCGTGCGGCCTTCTACAGCTCCATGACCCAGAACGGTATCTACACCCGGGACGAGTGCCGGCTGAAAGAGAACATGCCCCCGGAGGGA  >  NC_002947/1759701‑1759995

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.