New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1762690 | 64 (1.180) | 4 (0.080) | 4/248 | NT | 6.3% | coding (324/477 nt) | PP_1569 | hypothetical protein |
? | NC_002947 | = 1762715 | 57 (1.110) | coding (349/477 nt) | PP_1569 | hypothetical protein |
TGCTGCTGAGGCAGAGCAGGACCAAACTCTGCGCTGCCGCCTGCTCGACCATGCACGGCAGGCTCTGGCCGATGCCTATGACAAGGCTGACGCCGTCGCCTATGGCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1762582‑1762690 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcatgCCGCTTGGATCGCAGGATTAAGCACCATGCCATAG < NC_002947/1762715‑1762681 TGCTGCTGAGGCAGAGCAGGACCAAACTCTGCGCTGCCGCCTGCTCGACCATGCACGGCAGGCTCTGGCCGATGCCTATGACAAGGCTGACGCCGTCGCCTATGGCATGCCGCTTGGATCGCAGGATTAAGCACCATGCCATAG < 1:19629/144‑1 TGCTGCTGAGGCAGAGCAGGACCAAACTCTGCGCTGCCGCCTGCTCGACCATGCACGGCAGGCTCTGGCCGATGCCTATGACAAGGCTGACGCCGTCGCCTATGGCATGCCGCTTGGATCGCAGGATTAAGCACCATGCCATAG > 2:19629/1‑144 CAGAGCAGGACCAAACTCTGCGCTGCCGCCTGCTCGACCATGCACGGCAGGCTCTGGCCGATGCCTATGACAAGGCTGACGCCGTCGCCTATGGCATGCCGCTTGGATCGCAGGATTAAGCACCATGCCATA > 7:177435/1‑132 CAGAGCAGGACCAAACTCTGCGCTGCCGCCTGCTCGACCATGCACGGCAGGCTCTGGCCGATGCCTATGACAAGGCTGACGCCGTCGCCTATGGCATGCCGCTTGGATCGCAGGATTAAGCACCATGCCATA < 8:177435/132‑1 TGCTGCTGAGGCAGAGCAGGACCAAACTCTGCGCTGCCGCCTGCTCGACCATGCACGGCAGGCTCTGGCCGATGCCTATGACAAGGCTGACGCCGTCGCCTATGGCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1762582‑1762690 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcatgCCGCTTGGATCGCAGGATTAAGCACCATGCCATAG < NC_002947/1762715‑1762681 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |