New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1878847	51 (0.940)	4 (0.080)	4/252	NT	7.4%	coding (969/1221 nt)	PP_1684	transporter
	?	NC_002947	= 1878915	50 (0.950)					coding (1037/1221 nt)	PP_1684	transporter

GGTGGTGATCGTGCTGTTCCTGTGGGCGCCGGTGAGCGAGTTCAGTGCTTACCTGTTCGGTATTGCCATGTGCCTACTGTGGTTGTCCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1878757‑1878847 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacgATACCGCCGAGCATGGACAGGTTGCGCACCCCGAACACGGTGGCCACGGTCCCATTGGTCAGCGGTACCGTGGACAACCACAGTAGGCACATGGCAATACCGAACAGGTAAGCACTGAACTCGCTCACCGGCGCCCACAGGAA  <  NC_002947/1878915‑1878773                                                                                                                                                                                                                                            GGTGGTGATCGTGCTGTTCCTGTGGGCGCCGGTGAGCGAGTTCAGTGCTTACCTGTTCGGTATTGCCATGTGCCTACTGTGGTTGTCCACGATACCGCCGAGCATGGACAGGTTGCGCACCCCGAACACGGTGGCCACGGTCCCATTGG                                                                                       >  8:29414/1‑149                 TTCCTGTGGGCGCCGGTGAGCGAGTTCAGTGCTTACCTGTTCGGTATTGCCATGTGCCTACTGTGGTTGTCCACGATACCGCCGAGCATGGACAGGTTGCGCACCCCGAACACGGTGGCCACGGTCCCATTGGTCAGCGGTACCGTGG                                                                        <  7:29414/148‑1                                     CGAGTTCAGTGCTTACCTGTTCGGTATTGCCATGTGCCTACTGTGGTTGTCCACGATACCGCCGAGCATGGACAGGTTGCGCACCCCGAACACGGTGGCCACGGTCCCATTGGTCAGCGGTACC                                                                            >  5:139821/1‑124                                     CGAGTTCAGTGCTTACCTGTTCGGTATTGCCATGTGCCTACTGTGGTTGTCCACGATACCGCCGAGCATGGACAGGTTGCGCACCCCGAACACGGTGGCCACGGTCCCATTGGTCAGCGGTACC                                                                            <  6:139821/124‑1                                                                                          CGATACCGCCGAGCATGGACAGGTTGCGCACCCCGAACACGGTGGCCACGGTCCCATTGGTCAGCGGTACCGTGGACAACCACAGTAGGCACATGGCAATACCGAACAGGTAAGCACTGAACTCGCTCACCGGCGCCCACAGGAA  <  7:46050/145‑1                                                                                          CGATACCGCCGAGCATGGACAGGTTGCGCACCCCGAACACGGTGGCCACGGTCCCATTGGTCAGCGGTACCGTGGACAACCACAGTAGGCACATGGCAATACCGAACAGGTAAGCACTGAACTCGCTCACCGGCGCCCACAGGAA  >  8:46050/1‑145                                                                                                                                                                                                                                            GGTGGTGATCGTGCTGTTCCTGTGGGCGCCGGTGAGCGAGTTCAGTGCTTACCTGTTCGGTATTGCCATGTGCCTACTGTGGTTGTCCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1878757‑1878847 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacgATACCGCCGAGCATGGACAGGTTGCGCACCCCGAACACGGTGGCCACGGTCCCATTGGTCAGCGGTACCGTGGACAACCACAGTAGGCACATGGCAATACCGAACAGGTAAGCACTGAACTCGCTCACCGGCGCCCACAGGAA  <  NC_002947/1878915‑1878773

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.