New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 195556567 (1.240)5 (0.100) 5/250 NT 6.9% coding (203/975 nt) PP_1753 DMT superfamily permease
?NC_002947 = 1955597 70 (1.350)coding (235/975 nt) PP_1753 DMT superfamily permease

ACAGCGCTGCTCTGGGGCATCCTGCCGATCAAGCTCAAGCAGGTACTGCAAGTGGTCGACCCGATCACTGTCACCTGGTACCGCCTGCTGGTCTCCGGCGGCCTGCTGTTCGCCTGGCTGGCGGCTCAGCGGCGTTTGCCGTCCATGCGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1955414‑1955565
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcaaCCAGCACCAGGCCCTTGCCCCTGGGCGCCAGCTTGCGCATGGA  <  NC_002947/1955597‑1955555
                                                                                                                                                                                                   
ACAGCGCTGCTCTGGGGCATCCTGCCGATCAAGCTCAAGCAGGTACTGCAAGTGGTCGACCCGATCACTGTCACCTGGTACCGCCTGCTGGTCTCAGGCGGCCTGCTGTTCGCCTGGCTGGCGGCTCAGCGGCGTTTGCCGTCCATGCG                                                >  6:79804/1‑149
   GCGCTGCTCTGGGGCATCCTGCCGATCAAGCTCAAGCAGGTACTGCAAGTGGTCGACCCGATCACTGTCACCTGGTACCGCCTGCTGGTCTCCGGCGGCCTGCTGTTCGCCTGGCTGGCGGCTCAGCGGCGTTTGCCGTCCATGCGCA                                              >  4:1/1‑148
                            TCAAGCTCAAGCAGGTACTGCAAGTGGTCGACCCGATCACTGTCACCTGGTACCGCCTGCTGGTCTCCGGCGGCCTGCTGTTCGCCTGGCTGGCGGCTCAGCGGCGTTTGCCGTCCATGCGCAACCAGCACCAGGCCCTTGCCCCTGGG                    >  8:299232/1‑149
                                  TCAAGCAGGTACTGCAAGTGGTCGACCCGATCACTGTCACCTGGTACCGCCTGCTGGTCTCCGGCGGCCTGCTGTTCGCCTGGCTGGCGGCTCAGCGGCGTTTGCCGTCCATGCGCA                                              <  1:120390/117‑1
                                  TCAAGCAGGTACTGCAAGTGGTCGACCCGATCACTGTCACCTGGTACCGCCTGCTGGTCTCCGGCGGCCTGCTGTTCGCCTGGCTGGCGGCTCAGCGGCGTTTGCCGTCCATGCGCA                                              >  2:120390/1‑117
                                           TACTGCAAGTGGTCGACCCGATCACTGTCACCTGGTACCGCCTGCTGGTCTCCGGCGGCCTGCTGTTCGCCTGGCTGGCGGCTCAGCGGCGTTTGCCGTCCATGCGCAACCAGCACCAGGCCCTTGCCCCTGGGCGCCAGCTTGCGCAT     <  6:58284/149‑1
                                             CTGCAAGTGGTCGACCCGATCACTGTCACCTGGTACCGCCTGCTGGTCTCCGGCGGCCTGCTGTTCGCCTGGCTGGCGGCTCAGCGGCGTTTGCCGTCCATGCGCAACCAGCACCAGGCCCTTGCCCCTGGGCGCCAGCTTGCGCATG    <  7:299232/148‑1
                                                                        ACCTGGTACCGCCTGCTGGTCTCCGGCGGCCTGCTGTTCGCCTGGCTGGCGGCTCAGCGGCGTTTGCCGTCCATGCGCAACCAGCACCAGGCCCTTGCCCCTGGGCGCCAGCTTGCGCATGGA  <  3:85681/123‑1
                                                                        ACCTGGTACCGCCTGCTGGTCTCCGGCGGCCTGCTGTTCGCCTGGCTGGCGGCTCAGCGGCGTTTGCCGTCCATGCGCAACCAGCACCAGGCCCTTGCCCCTGGGCGCCAGCTTGCGCATGGA  >  4:85681/1‑123
                                                                                                                                                                                                   
ACAGCGCTGCTCTGGGGCATCCTGCCGATCAAGCTCAAGCAGGTACTGCAAGTGGTCGACCCGATCACTGTCACCTGGTACCGCCTGCTGGTCTCCGGCGGCCTGCTGTTCGCCTGGCTGGCGGCTCAGCGGCGTTTGCCGTCCATGCGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1955414‑1955565
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcaaCCAGCACCAGGCCCTTGCCCCTGGGCGCCAGCTTGCGCATGGA  <  NC_002947/1955597‑1955555

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.