New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1955565 | 67 (1.240) | 5 (0.100) | 5/250 | NT | 6.9% | coding (203/975 nt) | PP_1753 | DMT superfamily permease |
? | NC_002947 | = 1955597 | 70 (1.350) | coding (235/975 nt) | PP_1753 | DMT superfamily permease |
ACAGCGCTGCTCTGGGGCATCCTGCCGATCAAGCTCAAGCAGGTACTGCAAGTGGTCGACCCGATCACTGTCACCTGGTACCGCCTGCTGGTCTCCGGCGGCCTGCTGTTCGCCTGGCTGGCGGCTCAGCGGCGTTTGCCGTCCATGCGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1955414‑1955565 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcaaCCAGCACCAGGCCCTTGCCCCTGGGCGCCAGCTTGCGCATGGA < NC_002947/1955597‑1955555 ACAGCGCTGCTCTGGGGCATCCTGCCGATCAAGCTCAAGCAGGTACTGCAAGTGGTCGACCCGATCACTGTCACCTGGTACCGCCTGCTGGTCTCAGGCGGCCTGCTGTTCGCCTGGCTGGCGGCTCAGCGGCGTTTGCCGTCCATGCG > 6:79804/1‑149 GCGCTGCTCTGGGGCATCCTGCCGATCAAGCTCAAGCAGGTACTGCAAGTGGTCGACCCGATCACTGTCACCTGGTACCGCCTGCTGGTCTCCGGCGGCCTGCTGTTCGCCTGGCTGGCGGCTCAGCGGCGTTTGCCGTCCATGCGCA > 4:1/1‑148 TCAAGCTCAAGCAGGTACTGCAAGTGGTCGACCCGATCACTGTCACCTGGTACCGCCTGCTGGTCTCCGGCGGCCTGCTGTTCGCCTGGCTGGCGGCTCAGCGGCGTTTGCCGTCCATGCGCAACCAGCACCAGGCCCTTGCCCCTGGG > 8:299232/1‑149 TCAAGCAGGTACTGCAAGTGGTCGACCCGATCACTGTCACCTGGTACCGCCTGCTGGTCTCCGGCGGCCTGCTGTTCGCCTGGCTGGCGGCTCAGCGGCGTTTGCCGTCCATGCGCA < 1:120390/117‑1 TCAAGCAGGTACTGCAAGTGGTCGACCCGATCACTGTCACCTGGTACCGCCTGCTGGTCTCCGGCGGCCTGCTGTTCGCCTGGCTGGCGGCTCAGCGGCGTTTGCCGTCCATGCGCA > 2:120390/1‑117 TACTGCAAGTGGTCGACCCGATCACTGTCACCTGGTACCGCCTGCTGGTCTCCGGCGGCCTGCTGTTCGCCTGGCTGGCGGCTCAGCGGCGTTTGCCGTCCATGCGCAACCAGCACCAGGCCCTTGCCCCTGGGCGCCAGCTTGCGCAT < 6:58284/149‑1 CTGCAAGTGGTCGACCCGATCACTGTCACCTGGTACCGCCTGCTGGTCTCCGGCGGCCTGCTGTTCGCCTGGCTGGCGGCTCAGCGGCGTTTGCCGTCCATGCGCAACCAGCACCAGGCCCTTGCCCCTGGGCGCCAGCTTGCGCATG < 7:299232/148‑1 ACCTGGTACCGCCTGCTGGTCTCCGGCGGCCTGCTGTTCGCCTGGCTGGCGGCTCAGCGGCGTTTGCCGTCCATGCGCAACCAGCACCAGGCCCTTGCCCCTGGGCGCCAGCTTGCGCATGGA < 3:85681/123‑1 ACCTGGTACCGCCTGCTGGTCTCCGGCGGCCTGCTGTTCGCCTGGCTGGCGGCTCAGCGGCGTTTGCCGTCCATGCGCAACCAGCACCAGGCCCTTGCCCCTGGGCGCCAGCTTGCGCATGGA > 4:85681/1‑123 ACAGCGCTGCTCTGGGGCATCCTGCCGATCAAGCTCAAGCAGGTACTGCAAGTGGTCGACCCGATCACTGTCACCTGGTACCGCCTGCTGGTCTCCGGCGGCCTGCTGTTCGCCTGGCTGGCGGCTCAGCGGCGTTTGCCGTCCATGCGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1955414‑1955565 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcaaCCAGCACCAGGCCCTTGCCCCTGGGCGCCAGCTTGCGCATGGA < NC_002947/1955597‑1955555 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |