New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2297159 = | 40 (0.740) | 3 (0.060) | 3/246 | NT | 7.5% | coding (2963/3645 nt) | sbcC | exonuclease subunit SbcC |
? | NC_002947 | 2297208 = | 36 (0.700) | coding (2914/3645 nt) | sbcC | exonuclease subunit SbcC |
CTGGACGATGCCGGCCTCGATCGCCTGCTGGCCATGGATGACGCGCAAGTCAATGAATTGCGCCAGCGTTTGCAAGGCGCGGAAAAAGCCATCGAGCAGGGCCGCGTCCTGCTGCAGGAGCGCGAACAGCGCCTGCAGCATCACGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2297307‑2297159 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgcggcCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCATCGTCCAGTTCCGGATGCTCGCTGCGCCACTGGGCGATCTGGGCCTGCAACTGTTG > NC_002947/2297208‑2297355 CTGGACGATGCCGGCCTCGATCGCCTGCTGGCCATGGATGACGCGCAAGTCAATGAATTGCGCCAGCGTTTGCAAGGCGCGGAAAAAGCCATCGAGCAGGGCCGCGTCCTGCTGCAGGAGCGCGAACAGCGCCTGCAGCATCACGCGGC < 4:72828/149‑1 CATCGAGCAGGGCCGCGTCCTGCTGCAGGAGCGCGAACAGCGCCTGCAGCATCACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGCTCGAGGCCG > 8:77266/1‑149 GGGCCGCGTCCTGCTGCAGGAGCGCGAACAGCGCCTGCAGCATCACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCATCGTC > 3:262876/1‑148 GGGCCGCGTCCTGCTGCAGGAGCGCGAACAGCGCCTGCAGCATCACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCATCGTC < 4:262876/148‑1 ACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGCGGCCGGCATCGTCCAGTTCCGGATGCTCGCTGCGCCACTGGGCGATCTGGGCCTGCAA < 8:251900/149‑1 GCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCATCGTCCAGTTCCGGATGCTCGCTGCGCCACTGGGCGATCTGGGCCTGCAACT < 5:348843/149‑1 GGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCATCGTCCAGTTCCGGATGCTCGCTGCGCCACTGGG < 5:40801/129‑1 GGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCATCGTCCAGTTCCGGATGCTCGCTGCGCCACTGGG > 6:40801/1‑129 GCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCTGGCATCGTCCAGTTCCGGATGCTCGCTGCGCCACTGGGCGATCTGGGCCTGCAACTGTT < 1:309407/149‑1 CCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCATCGTCCAGTTCCGGATGCTCGCTGCGCCACTGGGCGATCTGGGCCTGCAACTGTTG > 4:329398/1‑149 CTGGACGATGCCGGCCTCGATCGCCTGCTGGCCATGGATGACGCGCAAGTCAATGAATTGCGCCAGCGTTTGCAAGGCGCGGAAAAAGCCATCGAGCAGGGCCGCGTCCTGCTGCAGGAGCGCGAACAGCGCCTGCAGCATCACGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2297307‑2297159 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgcggcCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCATCGTCCAGTTCCGGATGCTCGCTGCGCCACTGGGCGATCTGGGCCTGCAACTGTTG > NC_002947/2297208‑2297355 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |