New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2297159 =	40 (0.740)	3 (0.060)	3/246	NT	7.5%	coding (2963/3645 nt)	sbcC	exonuclease subunit SbcC
	?	NC_002947	2297208 =	36 (0.700)					coding (2914/3645 nt)	sbcC	exonuclease subunit SbcC

CGCAATTCGGCGCATTGCTGCTCGTGGTTTGCCAGGCGTTCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCATCGTCCAGTTCCGGATGCTCGCTGCGCCACTGGGCGATCTGGGCCTGCAACTGTTG  >  NC_002947/2297060‑2297355                                                                                                                                                     |                                                                                                                                                    cGCAATTCGGCGCATTGCTGCTCGTGGTTTGCCAGGCGTTCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGcc                                                                                                                                                     <  5:229933/149‑1 (MQ=255)   gacgatgccggcctcgatcgcctgctggccatggatgacgcgcaagtcaatgaattgcgccagcgtttgcaaggcgcggaaaaagccatcgagcaggGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGccc                                                                                                                                                    >  3:262876‑M1/98‑148 (MQ=255)   gacgatgccggcctcgatcgcctgctggccatggatgacgcgcaagtcaatgaattgcgccagcgtttgcaaggcgcggaaaaagccatcgagcaggGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGccc                                                                                                                                                    <  4:262876‑M1/51‑1 (MQ=255)        cGGCGCATTGCTGCTCGTGGTTTGCCAGGCGTTCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTc                                                                                                                                               <  4:253070/148‑1 (MQ=255)          gcgcATTGCTGCTCGTGGTTTGCCAGGCGTTCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGAt                                                                                                                                            <  2:55455/149‑1 (MQ=255)          gcgcATTGCTGCTCGTGGTTTGCCAGGCGTTCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGAt                                                                                                                                            >  5:220089/1‑149 (MQ=255)           cggcctcgagcgcctgctggccatggatgacgcgcaagtcaatgaattgcgccagcgtttgcaaggcgcggaaaaagccatcgagcaggGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATg                                                                                                                                           >  8:77266‑M1/90‑149 (MQ=255)                        gTGGTTTGCCAGGCGTTCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGa                                                                                                                                             <  6:225027/134‑1 (MQ=255)                        gTGGTTTGCCAGGCGTTCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGa                                                                                                                                             >  5:225027/1‑134 (MQ=255)                                       ttCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGgc                                                                                                               <  5:80453/149‑1 (MQ=255)                                       ttCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCAACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGgc                                                                                                               >  3:317605/1‑149 (MQ=255)                                          gcgcAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCt                                                                                                                                                   >  8:316775/1‑110 (MQ=255)                                          gcgcAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCt                                                                                                                                                   <  7:316775/110‑1 (MQ=255)                                          gcgcAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCC‑GCAGCAGGGCGCCGCCCTGGGGGATTGCTTTTTACCCGGCTTGCAAACGCTTGCCCaa                                                                                                           >  7:31027/1‑149 (MQ=255)                                            gcAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAAt                                                                                                          <  8:92401/149‑1 (MQ=255)                                                ttCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCAt                                                                                                      >  3:125098/1‑149 (MQ=255)                                                  cGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCAtt                                                                                                     <  5:180004/148‑1 (MQ=255)                                                     ccAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCTGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTg                                                                                                    <  3:68490/146‑1 (MQ=255)                                                     ccAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTg                                                                                                    >  4:68490/1‑146 (MQ=255)                                                     ccAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACt                                                                                                 >  7:40738/1‑149 (MQ=255)                                                      cAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACtt                                                                                                <  8:40738/149‑1 (MQ=255)                                                               cTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCAt                                                                                       >  6:348843/1‑149 (MQ=255)                                                                  cAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCa                                                                                    >  6:332219/1‑149 (MQ=255)                                                                     acagatgACCGTGGACACCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATgg                                                                                 >  8:266850/7‑149 (MQ=255)                                                                       cTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGc                                                                                >  1:21288/1‑148 (MQ=255)                                                                        ttGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGc                                                                                >  8:212594/1‑147 (MQ=255)                                                                        ttGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCca                                                                              <  2:300230/149‑1 (MQ=255)                                                                           gACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCcag                                                                             >  7:251900/1‑147 (MQ=255)                                                                              cGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGTTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGc                                                                        >  1:335900/1‑149 (MQ=255)                                                                              cGTGGTGTCAACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTACTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGc                                                                        >  2:309407/1‑149 (MQ=255)                                                                                         catcgagcagggccgcgtcctgctgcaggagcgcgaacagcgcctgcagcatcacgcggcCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGCTCGAGGCCg                                                             >  8:77266‑M2/61‑149 (MQ=255)                                                                                          ggTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGAt                                                                                                                                            <  6:112219/69‑1 (MQ=255)                                                                                          ggTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGAt                                                                                                                                            >  5:112219/1‑69 (MQ=255)                                                                                                  gggccgcgtcctgctgcaggagcgcgaacagcgcctgcagcatcacgcggcCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCATCGTc                                                     >  3:262876‑M2/52‑148 (MQ=255)                                                                                                  gggccgcgtcctgctgcaggagcgcgaacagcgcctgcagcatcacgcggcCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCATCGTc                                                     <  4:262876‑M2/97‑1 (MQ=255)                                                                                                   tgCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGTTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCATCGTCCa                                                   <  2:335900/149‑1 (MQ=255)                                                                                                   tgCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCATCGTCCa                                                   <  3:204402/149‑1 (MQ=255)                                                                                                   tgCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCATCGTCCa                                                   <  7:266850/149‑1 (MQ=255)                                                                                                    GCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCATCGTCCAg                                                  <  4:72828‑M1/149‑1 (MQ=255)                                                                                                                 gcAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCATCGTCCAGTTCCGGATGCTCg                                     >  4:280787/1‑149 (MQ=255)                                                                                                                       gcTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCATCGTCCAGTTCCGGATGCTCGCTgcgc                               <  3:280787/149‑1 (MQ=255)                                                                                                                           ttCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCATCGTCCAGTTCCGGATGCTCGCTGCGCCACt                           >  7:280484/1‑149 (MQ=255)                                                                                                                                      gcagcaGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCATCGTCCAGTTCCGGATGCTCGCTGCGCCACTGGGCGATCTgg                >  3:314288/1‑149 (MQ=255)                                                                                                                                       cagcagGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCATCGTCCAGTTCCGGATGCTCGCTGCGCCACTGGGCGATCTggg               >  6:61083/1‑149 (MQ=255)                                                                                                                                        agcagGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCATCGTCCAGTTCCGGATGCTCGCTGCGCCACTGGGCGATCTGGGc              <  8:280484/149‑1 (MQ=255)                                                                                                                                        agcagGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCATCGTCCAGTTCCGGATGCTCGCTGCGCCACTGGGCGATCTGGGc              >  5:56968/1‑149 (MQ=255)                                                                                                                                           agGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCATCGTCCAGTTCCGGATGCTCGCTGCGCCACTGGGCGATCTGGGCCTg           >  8:3422/1‑149 (MQ=255)                                                                                                                                            ggACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCATCGTCCAGTTCCGGATGCTCGCTGCGCCACTGGGCGATCTGGGCCTGc          <  3:72828/149‑1 (MQ=255)                                                                                                                                              acgcggcCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGCGGCCGGCATCGTCCAGTTCCGGATGCTCGCTGCGCCACTGGGCGATCTGGGCCTGCaa        <  8:251900‑M2/142‑1 (MQ=255)                                                                                                                                                gcggcCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCATCGTCCAGTTCCGGATGCTCGCTGCGCCACTGGGCGATCTGGGCCTGCAACt      <  5:348843‑M2/144‑1 (MQ=255)                                                                                                                                                  ggcCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCATCGTCCAGTTCCGGATGCTCGCTGCGCCACTggg                        >  6:40801‑M2/4‑129 (MQ=255)                                                                                                                                                  ggcCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCATCGTCCAGTTCCGGATGCTCGCTGCGCCACTggg                        <  5:40801‑M2/126‑1 (MQ=255)                                                                                                                                                   gcCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCTGGCATCGTCCAGTTCCGGATGCTCGCTGCGCCACTGGGCGATCTGGGCCTGCAACTGtt   <  1:309407‑M2/147‑1 (MQ=255)                                                                                                                                                    cCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCATCGTCCAGTTCCGGATGCTCGCTGCGCCACTGGGCGATCTGGGCCTGCAACTGTTg  >  4:329398‑M2/2‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                    CGCAATTCGGCGCATTGCTGCTCGTGGTTTGCCAGGCGTTCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCATCGTCCAGTTCCGGATGCTCGCTGCGCCACTGGGCGATCTGGGCCTGCAACTGTTG  >  NC_002947/2297060‑2297355

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.