New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2297165 | 43 (0.800) | 8 (0.160) | 7/246 | NT | 17.3% | coding (2957/3645 nt) | sbcC | exonuclease subunit SbcC |
? | NC_002947 | = 2297200 | 36 (0.700) | coding (2922/3645 nt) | sbcC | exonuclease subunit SbcC |
GCGCCTGGTGGGCCTGCTGGCGGCGCTGGTCGTCGGCCTGTTGTGCACGCAATTCGGCGCATTGCTGCTCGTGGTTTGCCAGGCGTTCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2297013‑2297165 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcgtCCTGCTGCAGGAGCGCGAACAGCGCCTGCAGCATCACGCGGCACAGATGACCGTGGACACCACGGTCCAAGCCCTGGAGCAAGCCTTGGCCGAACTGCGCGAACGCCTGGCAAACCACGAGCAGCAATGCGCCGAATTGCGTGCAC < NC_002947/2297200‑2297055 GCGCCTGGTGGGCCTGCTGGCGGCGCTGGTCGTCGGCCTGTTGTGCACGCAATTCGGCGCATTGCTGCTCGTGGTTTGCCAGGCGTTCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCC < 7:157725/149‑1 GCCTGCTGGCGGCGCTGGTCGTCGGCCTGTTGTGCACGCAATTCGGCGCATTGCTGCTCGTGGTTTGCCAGGCGTTCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGGGCCGCGTCCTGCTG > 2:33263/1‑149 GCCTGTTGTGCACGCAATTCGGCGCATTGCTGCTCGTGGTTTGCCAGGCGTTCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGAGCGCGAACAGCGC > 3:98079/1‑143 GCCTGTTGTGCACGCAATTCGGCGCATTGCTGCTCGTGGTTTGCCAGGCGTTCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGAGCGCGAACAGCGC < 4:98079/143‑1 ATTCGGCGCATTGCTGCTCGTGGTTTGCCAGGCGTTCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGGGCCGCGTCCTGCTGCAGGAGCGCGAACAGCGCCTGCAGCATCACGCGGCACAGA < 1:33263/149‑1 ATTGCTGCTCGTGGTTTGCCAGGCGTTCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGCGCCGCGTCCTGCTGCAGGAGCGCGAACAGCGCCTGCAGCATCACGCGGCACAGAT < 3:256276/141‑1 ATTGCTGCTCGTGGTTTGCCAGGCGTTCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGCGCCGCGTCCTGCTGCAGGAGCGCGAACAGCGCCTGCAGCATCACGCGGCACAGAT > 4:256276/1‑141 GCGTTCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTCCTGCTGCAGGAGCGCGAACAGCGCCTGCAGCATCACGCGGCACAGAT > 7:219145/1‑119 GCGTTCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTCCTGCTGCAGGAGCGCGAACAGCGCCTGCAGCATCACGCGGCACAGAT < 8:219145/119‑1 CCGCGTCCTGCTGCAGGAGCGCGAACAGCGCCTGCAGCATCACGCGGCACAGATGACCGTGGACACCACGGTCCAAGCCCTGGAGCAAGCCTTGGCCGAACTGCGCGAACGCCTGGCAAACCACGAGCAGCAATGCGCCGAATTGCGTG < 1:55455/149‑1 CGCGTCCTGCTGCAGGAGCGCGAACAGCGCCTGCAGCATCACGCGGCACAGATGACCGTGGACACCACGGTCCAAGCCCTGGAGCAAGCCTTGGCCGAACTGCGCGAACGCCTGGCAAACCACGAGCAGCAATGCGCCGAATTGCGTGC < 6:180004/149‑1 CGCGTCCTGCTGCAGGAGCGCGAACAGCGCCTGCAGCATCACGCGGCACAGATGACCGTGGACACCACGGTCCAAGCCCTGGAGCAAGCCTTGGCCGAACTGCGCGAACGCCTGGCAAACCACGAGCAGCAATGCGCCGAATTGCGTGC < 8:87496/149‑1 CGTCCTGCTGCAGGAGCGCGAACAGCGCCTGCAGCATCACGCGGCACAGATGACCGTGGACACCACGGTCCAAGCCCTGGAGCAAGCCTTGGCCGAACTGCGCGAACGCCTGGCAAACCACGAGCAGCAATGCGCCGAATTGCGTGCAC < 7:92401/149‑1 GCGCCTGGTGGGCCTGCTGGCGGCGCTGGTCGTCGGCCTGTTGTGCACGCAATTCGGCGCATTGCTGCTCGTGGTTTGCCAGGCGTTCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2297013‑2297165 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcgtCCTGCTGCAGGAGCGCGAACAGCGCCTGCAGCATCACGCGGCACAGATGACCGTGGACACCACGGTCCAAGCCCTGGAGCAAGCCTTGGCCGAACTGCGCGAACGCCTGGCAAACCACGAGCAGCAATGCGCCGAATTGCGTGCAC < NC_002947/2297200‑2297055 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |