New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2310206 =	40 (0.740)	3 (0.060)	3/238	NT	7.4%	intergenic (‑185/‑44)	PP_2032/PP_2033	ATPase/hypothetical protein
	?	NC_002947	2310277 =	39 (0.790)					coding (28/1311 nt)	PP_2033	hypothetical protein

ACCCTCCGCCGTGGCATTGTGCAGGTTGTTTCCGGTGCCATCGAAGAACACGCCAAAACGCAGGGTGACCGGCGTAAGGTTTGCCGTGCTGGCGCTGCTCATTTTCATCATCGTGTCTCCTGCTTGTCCGAAAAGCACAAGCAGGCGCCAGCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2310360‑2310206 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccagcacgGCAAACCTTACGCCGGTCACCCTGCGTTTTGGCGTGTTCTTCGATGGCACCGGAAACAACCTGCACAATGCCACGGCGGAGGGTGAGCAGGGTGACAA‑GGGTGGCAGCTATGGCAACGCCTTGAGCAATGTGGCCCTGTTGCAT  >  NC_002947/2310277‑2310420                                                                                                                                                                                                                                                                                                              ACCCTCCGCCGTGGCATTGTGCAGGTTGTTTCCGGTGCCATCGAAGAACACGCCAAAACGCAGGGTGACCGGCGTAAGGTTTGCCGTGCTGGCGCTGCTCATTTTCATCATCGTGTCTCCTGCTTGTCCGAAAAGCACAAGCAGGCGC                                                                                                                                                          >  1:78481/1‑148  CCCTCCGCCGTGGCATTGTGCAGGTTGTTTCCGGTGCCATCGAAGAACACGCCAAAACGCAGGGTGACCGGCGTAAGGTTTGCCGTGCTGGCGCTGCTCATTTTCATCATCGTGTCTCCTGCTTGTCCGAAAAGCACAAGCAGGCGCCA                                                                                                                                                        <  1:80928/149‑1   CCTCCGCCGTGGCATTGTGCAGGTTGTTTCCGGTGCCATCGAAGAACACGCCAAAACGCAGGGTGACCGGCGTAAGGTTTGCCGTGCTGGCGCTGCTCATTTTCATCATCGTGTCTCCTGCTTGTCCGAAAAGCACAAGCAGGCGC                                                                                                                                                          >  3:326192/1‑146       CGCCGTGGCATTGTGCAGGTTGTTTCCGGTGCCATCGAAGAACACGCCAAAACGCAGGGTGACCGGCGTAAGGTTTGCCGTGCTGGCGCTGCTCATTTTCATCATCGTGTCTCCTGCTTGTCCGAAAAGCACAAGCAGGCGCCAGCACG                                                                                                                                                   >  2:289119/1‑149                                                           CGCAGGGTGACCGGCGTAAGGTTTGCCGTGCTGGCGCTGCTCATTTTCATCATCGTGTCTCCTGCTTGTCCGAAAAGCACAAGCAGGCGC                                                                                                                                                          >  3:235976/1‑90                                                           CGCAGGGTGACCGGCGTAAGGTTTGCCGTGCTGGCGCTGCTCATTTTCATCATCGTGTCTCCTGCTTGTCCGAAAAGCACAAGCAGGCGC                                                                                                                                                          <  4:235976/90‑1                                                                                      GTGCTGGCGCTGCTCATTTTCATCATCGTGTCTCCTGCTTGTCCGAAAAGCACAAGCAGGCGCCAGCACGGCAAACCTTACGCCGGTCACCCTGCGTTTTGGCGTGTTCTTCGATGGCACCGGAAACAACCTGCACAATGCCACGGCG                                                                     >  5:60062/1‑148                                                                                         CTGGCGCTGCTCATTTTCATCATCGTGTCTCCTGCTTGTCCGAAAAGCACAAGCAGGCGCCAGCACGGCAAACCTTACGCCGGTCACCCTGCGTTTTGGCGTGTTCTTCGATGGCACCGGAAACAACCTGCACAATGCCACGGCGGAGG                                                                 <  6:60062/149‑1                                                                                            GCGCTGCTCATTTTCATCATCGTGTCTCCTGCTTGTCCGAAAAGCACAAGCAGGCGCCAGCACGGCAAACCTTACGCCGGTCACCCTGCGTTTTGGCGTGTTCTTCGATGGCACCGGAAACAACCTGCACAATGCCACGGCGGAGGGTG                                                              >  5:153131/1‑149                                                                                                                                                     CAGCACGGCAAACCTTACGCCGGTCACCCTGCGTTTTGGCGTGTTCTTCGATGGCACCGGAAACAACCTGCACAATGCCACGGCGGAGGGTGAGCAGGGTGACAA‑GGGTGGCAGCTATGGCAACGCCTTGAGCAATGTGGCCCTGTTG     >  4:29007/1‑148                                                                                                                                                       GCACGGCAAACCTTACGCCGGTCACCCTGCGTTTTGGCGTGTTCTTCGATGGCACCGGAAACAACCTGCACAATGCCACGGCGGAGGGTGAGCAGGGTGACAA‑GGGTGGCAGCTATGGCAACGCCTTGAGCAATGTGGCCCT         <  3:113776/142‑1                                                                                                                                                       GCACGGCAAACCTTACGCCGGTCACCCTGCGTTTTGGCGTGTTCTTCGATGGCACCGGAAACAACCTGCACAATGCCACGGCGGAGGGTGAGCAGGGTGACAA‑GGGTGGCAGCTATGGCAACGCCTTGAGCAATGTGGCCCT         >  4:113776/1‑142                                                                                                                                                           GGCAAACCTTACGCCGGTCACCCTGCGTTTTGGCGTGTTCTTCGATGGCACCGGAAACAACCTGCACAATTCCACGGCGGAGGGTGAGCAGGGTGACAATGGTTGGCAGCTATGGCAACGCCTTGAGCAATGTGGCCCTGTTGCAT  <  1:239277/146‑1                                                                                                                                                           GGCAAACCTTACGCCGGTCACCCTGCGTTTTGGCGTGTTCTTCGATGGCACCGGAAACAACCTGCACAATGCCACGGCGGAGGGTGAGCAGGGTGACAA‑GGGTGGCAGCTATGGCAACGCCTTGAGCAATGTGGCCCTGTTGCAT  >  2:239277/1‑145                                                                                                                                                                                                                                                                                                              ACCCTCCGCCGTGGCATTGTGCAGGTTGTTTCCGGTGCCATCGAAGAACACGCCAAAACGCAGGGTGACCGGCGTAAGGTTTGCCGTGCTGGCGCTGCTCATTTTCATCATCGTGTCTCCTGCTTGTCCGAAAAGCACAAGCAGGCGCCAGCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2310360‑2310206 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccagcacgGCAAACCTTACGCCGGTCACCCTGCGTTTTGGCGTGTTCTTCGATGGCACCGGAAACAACCTGCACAATGCCACGGCGGAGGGTGAGCAGGGTGACAA‑GGGTGGCAGCTATGGCAACGCCTTGAGCAATGTGGCCCTGTTGCAT  >  NC_002947/2310277‑2310420

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.