| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2496018 = | 56 (1.040) | 4 (0.080) | 4/248 | NT | 7.3% | coding (139/264 nt) | PP_2190 | hypothetical protein |
| ? | NC_002947 | 2496055 = | 48 (0.930) | coding (176/264 nt) | PP_2190 | hypothetical protein | |||||
CTACTGACAAGCGCCGGGCGGGTGTGCTCAGCGGTTGGCGCTGGCTGCGGCCATCAGCTTGTTGACTTCGCTGCGCACCATGCTGGCGTATTCAGGCGGCGTCATGCCGTCCAGTTCGGCGCGCACCCACTCGGCCCATTTGCCCTTGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2496170‑2496018‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccgAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGAAGTCAACAAGCTGATGGCCGCAGCCAGCGCCAACCGCTGAGCACACCCGCCCGGCGCTTGTCAGTAGGTGCCCTTGGGCAGGTCCAGCTTGCCTTCAT > NC_002947/2496055‑2496201 CTACTGACAAGCGCCGGGCGGGTGTGCTCAGCGGTTGGCGCTGGCTGCGGCCATCAGCTTGTTGACTTCGCTGCGCACCATGCTGGCGTATTCAGGCGGCGTCATGCCGTCCAGTTCGGCGCGCACCCACTCGGCCCATTTGCCCTTGC > 5:123491/1‑149 TGACAAGCGCCGGGCGGGTGTGCTCAGCGGTTGGCGCTGGCTGCGGCCATCAGCTTGTTGACTTCGCTGCGCACCATGCTGGCGTATTCAGGCGGCGTCATGCCGTCCAGTTCGGCGCGCACCCACTCGGCCCATTTGCCCTTGCGCCG > 3:163630/1‑149 TGACAAGCGCCGGGCGGGTGTGCTCAGCGGTTGGCGCTGGCTGCGGCCATCAGCTTGTTGACTTCGCTGCGCACCATGCTGGCGTATTCAGGCGGCGTCATGCCGTCCAGTTCGGCGCGCACCCACTCGGCCCATTTGCCCTTGCGCCG > 3:96975/1‑149 GTTCGGCGCGCACCCACTCGGCCCATTTGCCCTTGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGAAGTCAACAAGCTGATGGCCGCAGCCAGCG < 3:292920/118‑1 GTTCGGCGCGCACCCACTCGGCCCATTTGCCCTTGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGAAGTCAACAAGCTGATGGCCGCAGCCAGCG > 4:292920/1‑118 TTCGGCGCGCACCCACTCGGCCCATTTGCCCTTGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGAAGTCAACAAGCTGATGGCCGCAGCCAGCGCCAACCGCTGAGCACACCCGCCCGGCGCTTGT > 4:143800/1‑149 GGCCCATTTGCCCTTGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGAAGTCAACAAGCTGATGGCCGCAGCCAGCGCCAACCGCTGAGCACACCCGCCCGGCGCTTGTCAGTAGGTGCCCTTGGGC < 3:143800/149‑1 CGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGAAGTCAACAAGCTGATGGCCGCAGCCAGCGCCAACCGCTGAGCACACCCGCCCGGCGCTTGTCAGTAGGTGCCCTTGGGCAGGTCCAGCTTGCCTTCAT < 3:236309/149‑1 CTACTGACAAGCGCCGGGCGGGTGTGCTCAGCGGTTGGCGCTGGCTGCGGCCATCAGCTTGTTGACTTCGCTGCGCACCATGCTGGCGTATTCAGGCGGCGTCATGCCGTCCAGTTCGGCGCGCACCCACTCGGCCCATTTGCCCTTGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2496170‑2496018‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccgAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGAAGTCAACAAGCTGATGGCCGCAGCCAGCGCCAACCGCTGAGCACACCCGCCCGGCGCTTGTCAGTAGGTGCCCTTGGGCAGGTCCAGCTTGCCTTCAT > NC_002947/2496055‑2496201 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |