New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2496018 =	56 (1.040)	4 (0.080)	4/248	NT	7.3%	coding (139/264 nt)	PP_2190	hypothetical protein
	?	NC_002947	2496055 =	48 (0.930)					coding (176/264 nt)	PP_2190	hypothetical protein

GGTAACTTCATGAGTTTCAATCTGGCCAACATGAGCTTCGAGGAACGGGCGCAGATCGAGGCAGAGAAGGCTCGGCTGTTCGAGATGTGGCAGAACAACCTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGAAGTCAACAAGCTGATGGCCGCAGCCAGCGCCAACCGCTGAGCACACCCGCCCGGCGCTTGTCA  >  NC_002947/2495871‑2496166                                                                                                                                                    |                                                                                                                                                     atgaaggcaagctggacctgcccaagggcacctactgacaagcgccgggcgggtgtgctcagcggttggcgctggctgcggccatcagcttgttgacttcgctgcgcaccatgctggcgtattcaggcggcgtcatgccgtccagttCg                                                                                                                                                     <  3:236309‑M1/2‑1 (MQ=255)          aTGAGTTTCAATCTGGCCAACATGAGCTTCGAGGAACGGGCGCAGATCGAGGCAGAGAAGGCTCGGCTGTTCGAGATGTGGCAGAACAACCTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAggg                                                                                                                                            >  8:181823/1‑149 (MQ=255)               tttCAATCTGCCCAACATGAGCTTCGAGGAACGGGCGCAGATCGAGGCAGAGAAGGCTCGGCTGTACGAGAAGTGGCAGAACGACCTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCaact                                                                                                                                       >  8:96813/1‑147 (MQ=255)                    gcccaagggcacctactgacaagcgccgggcgggtgtgctcagcggttggcgctggctgcggccatcagcttgttgacttcgctgcgcaccatgctggcgtattcaggcggcgtcatgccgtccagttCGGCGCAAGGGCAAATGGGcc                                                                                                                                  <  3:143800‑M1/21‑1 (MQ=255)                          ccAACATGAGCTTCGAGGAACGGGCGCAGATCGAGGCAGAGAAGGCTCGGCTGTTCGAGATGTGGCAGAACAACCTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTgg                                                                                                                            <  8:241910/149‑1 (MQ=255)                                      tCGAGGAACGGGCGCAGATCGAGGCAGAGAAGGCTCGGCTGTTCGAGATGTGGCAGAACAACCTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGaa                                                                                                                >  6:227339/1‑149 (MQ=255)                                      acaagcgccgggcgggtgtgctcagcggttggcgctggctgcggccatcagcttgttgacttcgctgcgcaccatgctggcgtattcaggcggcgtcatgccgtccagttCGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGaa                                                                                                                >  4:143800‑M1/111‑149 (MQ=255)                                        gAGGAACGGGCGCAGATCGAGGCAGAGAAGGCTCGGCTGTTCGAGATGTGGCAGAACAACCTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAACAGCCACGGCGCAAGGGCAAATGGGCGGAGTGGGTGCGCGCCGCACt                                                                                                              >  8:80793/1‑149 (MQ=255)                                         aGGAACGGGCGCAGATCGAGGCAGAGAAGGCTCGGCTGTTCGAGATGTGGCAGAACAACCTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAAc                                                                                                               <  8:322564/147‑1 (MQ=255)                                         aGGAACGGGCGCAGATCGAGGCAGAGAAGGCTCGGCTGTTCGAGATGTGGCAGAACAACCTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAAc                                                                                                               >  7:322564/1‑147 (MQ=255)                                                 gcgcAGATCGAGGCAGAGAAGGCTCGGCTGTTCGAGATGTGGCAGAACAACCTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTgcgc                                                                                                                      <  3:169998/132‑1 (MQ=255)                                                 gcgcAGATCGAGGCAGAGAAGGCTCGGCTGTTCGAGATGTGGCAGAACAACCTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCAt                                                                                                     >  4:163630/1‑149 (MQ=255)                                                 gcgcAGATCGAGGCAGAGAAGGCTAGGCTGTTCGAGATGTGGCAGAACAACCTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTgcgc                                                                                                                      >  4:169998/1‑132 (MQ=255)                                                     aGATCGAGGCAGAGAAGGCTCGGCTGTTCGAGATGTGGCAGAACAACCTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGgcgc                                                                                                                                                 <  4:185291/101‑1 (MQ=255)                                                     aGATCGAGGCAGAGAAGGCTCGGCTGTTCGAGATGTGGCAGAACAACCTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGgcgc                                                                                                                                                 >  3:185291/1‑101 (MQ=255)                                                       aTCGAGGCAGAGAAGGCTCGGCTGTTCGAGATGTGGCAGAACAACCTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGcc                                                                                                                   >  8:26436/1‑129 (MQ=255)                                                       aTCGAGGCAGAGAAGGCTCGGCTGTTCGAGATGTGGCAGAACAACCTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGcc                                                                                                                   <  7:26436/129‑1 (MQ=255)                                                             gCAGAGAAGGCTCGGCTGTTCGAGATGTGGCAGAACAACCTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGa                                                                                         <  3:267169/149‑1 (MQ=255)                                                               agagAAGGCTCGGCTGTTCGAGATGTGGCAGAACAACCTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGaa                                                                                        >  2:157219/1‑148 (MQ=255)                                                                gagaAGGCTCGGCTGTTCGAGATGTGGCAGAACAACCTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCGGCCTGAATa                                                                                      >  3:47707/1‑149 (MQ=255)                                                                   aaGGCTCGGCTGTTCGAGATGTGGCAGAACAACCTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGc                                                                                   >  2:20168/1‑149 (MQ=255)                                                                     ggCTCGGCTGTTCGAGATGTGGCAGAACAACCTGGGCAAAGCCAAGTGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGc                                                                                   >  1:76735/1‑147 (MQ=255)                                                                      gCTCGGCTGTTCGAGATGTGGCAGAACAACCTGGGAAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCACAAAAGCCACTGCGCAAGGGCAAATGGACCGAGTGGGTGCGGGCCGAAATGGAAGGGATTACGCCGCCTGAATAAGCCAg                                                                                >  2:253109/1‑149 (MQ=255)                                                                      cgctggctgcggccatcagcttgttgacttcgctgcgcaccatgctggcgtattcaggcggcgtcatgccgtccagttCGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAAc                                                                                                               >  4:292920‑M1/79‑118 (MQ=255)                                                                      cgctggctgcggccatcagcttgttgacttcgctgcgcaccatgctggcgtattcaggcggcgtcatgccgtccagttCGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAAc                                                                                                               <  3:292920‑M1/40‑1 (MQ=255)                                                                        tCGGCTGTTCGAGATGTGGCAGAACAACCTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCa                                                                              >  8:104785/1‑149 (MQ=255)                                                                          ggCTGTTCGAGATGTGGCAGAACAACCTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATg                                                                            >  3:20266/1‑149 (MQ=255)                                                                           gCTGTTCGAGATGTGGCAGAACAACCTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACgg                                                                                                        >  6:129199/1‑120 (MQ=255)                                                                           gCTGTTCGAGATGTGGCAGAACAACCTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACgg                                                                                                        <  5:129199/120‑1 (MQ=255)                                                                           gCTGTTCGAGATGTGGCAGAACAACCTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATgc                                                                           >  2:52493/1‑148 (MQ=255)                                                                            cTGTTCGAGATGTGGCAGAACAACCTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGt                                                                          <  4:47707/149‑1 (MQ=255)                                                                                  gagaTGTGGCAGAACAACCTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAg                                                                    >  1:11924/1‑149 (MQ=255)                                                                                      tgtgGCAGAACAACCTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGaa                                                                <  7:104785/149‑1 (MQ=255)                                                                                      tgtgGCAGAACAACCTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGaa                                                                <  7:181823/149‑1 (MQ=255)                                                                                         ggCAGAACAACCTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCTCGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGAAGt                                                              >  4:236309/1‑148 (MQ=255)                                                                                          gCAGAACAACCTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGAAGTc                                                             >  4:265508/1‑148 (MQ=255)                                                                                            aGAACAACCTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGAAGTcaac                                                          <  1:20168/149‑1 (MQ=255)                                                                                              aacaacCTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCCGAATACGCCAGCATGGTGCGCAGCGAAGTcaac                                                          <  2:48546/147‑1 (MQ=255)                                                                                              aacaacCTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCCGAATACGCCAGCATGGTGCGCAGCGAAGTcaac                                                          >  1:48546/1‑147 (MQ=255)                                                                                                 gcccTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGaa                                                                >  4:186555/3‑138 (MQ=255)                                                                                                 gcccTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGaa                                                                <  3:186555/136‑1 (MQ=255)                                                                                                   ccTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGAAGTCAACAAGCTGa                                                   >  1:319983/1‑149 (MQ=255)                                                                                                   ccTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGAAGTCAACAAGCTGa                                                   <  3:265508/149‑1 (MQ=255)                                                                                                    cTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGAAGTCAACAAGCTGAt                                                  <  1:52493/149‑1 (MQ=255)                                                                                                      gggCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGc                                                                                                                                   >  1:235695/1‑66 (MQ=255)                                                                                                      gggCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGc                                                                                                                                   <  2:235695/66‑1 (MQ=255)                                                                                                        gCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGAAGTCAACAAGCTGATGGcc                                              <  2:12038/149‑1 (MQ=255)                                                                                                         cAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGAAGTCAACAAGCTGATGGCCg                                             <  4:20266/149‑1 (MQ=255)                                                                                                          aaaGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGAAGTCAACAAGCTGATGGCCg                                             >  8:158943/1‑148 (MQ=255)                                                                                                             gCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGAAGTCAACAAGCTGATGGCCGcagc                                         <  2:76735/149‑1 (MQ=255)                                                                                                              ccAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGAAGTcaacaa                                                        <  6:79609/133‑1 (MQ=255)                                                                                                              ccAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGAAGTcaacaa                                                        >  5:79609/1‑133 (MQ=255)                                                                                                                aaGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGAAGTCAACAAGCTGATGGCCGcagccag                                      >  4:319612/1‑149 (MQ=255)                                                                                                                           cgccCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGAAGTCAACAAGCTGATGGCCGCAGCCAGCGCCAACCGCt                           <  7:96813/149‑1 (MQ=255)                                                                                                                            gccCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGAAGTCAACAAGCTGATGGCCGCAGCCAGCGCCAACCGCt                           >  7:177506/1‑148 (MQ=255)                                                                                                                                 gCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGAAGTCAACAAGCTGATGGCCGCAGCCAGCGCCAACCGCTGAGc                       <  3:118898/147‑1 (MQ=255)                                                                                                                                 gCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGAAGTCAACAAGCTGATGGCCGCAGCCAGCGCCAACCGCTGAGc                       >  4:118898/1‑147 (MQ=255)                                                                                                                                          cGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGAAGTCAACAAGCTGATGGCCGCAGCCAGCGCCAACCGCTGAGCACAcccgcccg            <  2:319983/149‑1 (MQ=255)                                                                                                                                           gAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGAAGTCAACAAGCTGATGGCCGCAGCCAGCGCCAACCGCTGAGCACACCCGCCCgg           <  5:227339/149‑1 (MQ=255)                                                                                                                                            aaaaGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGAAGTCAACAAGCTGATGGCCGCAGCCAGCGCCAACCGCTGAGCACACCCGCCCGgc          <  8:177506/149‑1 (MQ=255)                                                                                                                                             aaaGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGAAGTCAACAAGCTGATGGCCGCAGCCAGCGCCAACCGCTGAGCACACCCGCCCGgcg         >  6:123491/1‑149 (MQ=255)                                                                                                                                                  cACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGAAGTCAACAAGCTGATGGCCGCAGCCAGCGCCAACCGCTGAGCACACCCGCCCGGCGCTTGt    <  3:319612/149‑1 (MQ=255)                                                                                                                                                   aCGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGAAGTCAACAAGCTGATGGCCGCAGCCAGCGCCAACCGCTGAGCACACCCGCCCGGCGCTTGt    >  4:96975/1‑148 (MQ=255)                                                                                                                                                    CGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGAAGTCAACAAGCTGATGGCCGCAGCCAGCGCCAACCGCTGAGCACACCCGCCCGGCGCTTGTCa  >  3:163630‑M1/1‑149 (MQ=255)                                                                                                                                                    CGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGAAGTCAACAAGCTGATGGCCGCAGCCAGCGCCAACCGCTGAGCACACCCGCCCGGCGCTTGTCa  >  3:96975‑M1/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                     GGTAACTTCATGAGTTTCAATCTGGCCAACATGAGCTTCGAGGAACGGGCGCAGATCGAGGCAGAGAAGGCTCGGCTGTTCGAGATGTGGCAGAACAACCTGGGCAAAGCCAAGGGCGAAGCCGCCCGGCTGATTGCCGAAAAGCCACGGCGCAAGGGCAAATGGGCCGAGTGGGTGCGCGCCGAACTGGACGGCATGACGCCGCCTGAATACGCCAGCATGGTGCGCAGCGAAGTCAACAAGCTGATGGCCGCAGCCAGCGCCAACCGCTGAGCACACCCGCCCGGCGCTTGTCA  >  NC_002947/2495871‑2496166

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.